RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 MIC13Q5XKP0 118 aa0.96□□□□□ -2.26
HMGB3P12-201ENST00000438745 AKAP14Q86UN6 197 aa0.96□□□□□ -2.26
HMGB3P12-201ENST00000438745 ARL17AQ8IVW1 177 aa0.96□□□□□ -2.26
HMGB3P12-201ENST00000438745 TMEM126AQ9H061 195 aa0.96□□□□□ -2.26
HMGB3P12-201ENST00000438745 TGIF2-C20orf24A0A0A6YYL0 155 aa0.95□□□□□ -2.26
HMGB3P12-201ENST00000438745 TRAV13-1A0A0B4J241 112 aa0.95□□□□□ -2.26
HMGB3P12-201ENST00000438745 IGKV3D-7A0A0C4DH55 119 aa0.95□□□□□ -2.26
HMGB3P12-201ENST00000438745 FAM236AA0A1B0GUQ0 79 aa0.95□□□□□ -2.26
HMGB3P12-201ENST00000438745 FAM236BA0A1B0GV22 79 aa0.95□□□□□ -2.26
HMGB3P12-201ENST00000438745 TMEM238C9JI98 176 aa0.95□□□□□ -2.26
HMGB3P12-201ENST00000438745 TMBIM6P55061 237 aa0.95□□□□□ -2.26
HMGB3P12-201ENST00000438745 UBE2L3P68036 154 aaKnown RBP0.95□□□□□ -2.26
HMGB3P12-201ENST00000438745 Q1T7F1 81 aa0.95□□□□□ -2.26
HMGB3P12-201ENST00000438745 SCGB2B2Q4G0G5 96 aa0.95□□□□□ -2.26
HMGB3P12-201ENST00000438745 SPANXN1Q5VSR9 72 aa0.95□□□□□ -2.26
HMGB3P12-201ENST00000438745 TMEM91Q6ZNR0 172 aa0.95□□□□□ -2.26
HMGB3P12-201ENST00000438745 PSENENQ9NZ42 101 aa0.95□□□□□ -2.26
HMGB3P12-201ENST00000438745 RSL24D1Q9UHA3 163 aaKnown RBP0.95□□□□□ -2.26
HMGB3P12-201ENST00000438745 LSM5Q9Y4Y9 91 aaKnown RBP0.95□□□□□ -2.26
HMGB3P12-201ENST00000438745 TRBV20OR9-2A0A075B6H5 130 aa0.94□□□□□ -2.26
HMGB3P12-201ENST00000438745 TRBV10-2A0A0K0K1G8 114 aa0.94□□□□□ -2.26
HMGB3P12-201ENST00000438745 FABP5P3A8MUU1 101 aa0.94□□□□□ -2.26
HMGB3P12-201ENST00000438745 METTL15P1P0C7V9 234 aa0.94□□□□□ -2.26
HMGB3P12-201ENST00000438745 GNG5P63218 68 aa0.94□□□□□ -2.26
HMGB3P12-201ENST00000438745 RNASE10Q5GAN6 216 aaKnown RBP0.94□□□□□ -2.26
HMGB3P12-201ENST00000438745 C2orf82Q6UX34 121 aa0.94□□□□□ -2.26
HMGB3P12-201ENST00000438745 AP1S3Q96PC3 154 aa0.94□□□□□ -2.26
HMGB3P12-201ENST00000438745 MGST2Q99735 147 aa0.94□□□□□ -2.26
HMGB3P12-201ENST00000438745 MRPS26Q9BYN8 205 aaKnown RBP0.94□□□□□ -2.26
HMGB3P12-201ENST00000438745 OTORQ9NRC9 128 aa0.94□□□□□ -2.26
HMGB3P12-201ENST00000438745 TRAV1-2A0A0B4J238 106 aa0.93□□□□□ -2.26
HMGB3P12-201ENST00000438745 PIGBOS1A0A0B4J2F0 54 aa0.93□□□□□ -2.26
HMGB3P12-201ENST00000438745 LOC100130705A0A1B0GUX0 176 aa0.93□□□□□ -2.26
HMGB3P12-201ENST00000438745 TCRBV3S1A0A5B6 114 aa0.93□□□□□ -2.26
HMGB3P12-201ENST00000438745 ERC2-IT1O76042 136 aa0.93□□□□□ -2.26
HMGB3P12-201ENST00000438745 NCR2O95944 276 aa0.93□□□□□ -2.26
HMGB3P12-201ENST00000438745 FOXA3P55318 350 aaPredicted RBP0.93□□□□□ -2.26
HMGB3P12-201ENST00000438745 CKS1BP61024 79 aa0.93□□□□□ -2.26
HMGB3P12-201ENST00000438745 PMAIP1Q13794 54 aa0.93□□□□□ -2.26
HMGB3P12-201ENST00000438745 NDUFA5Q16718 116 aa0.93□□□□□ -2.26
HMGB3P12-201ENST00000438745 KRTAP19-8Q3LI54 63 aa0.93□□□□□ -2.26
HMGB3P12-201ENST00000438745 MIR17HGQ75NE6 70 aa0.93□□□□□ -2.26
HMGB3P12-201ENST00000438745 AP3S1Q92572 193 aa0.93□□□□□ -2.26
HMGB3P12-201ENST00000438745 OBSCN-AS1Q96MR7 158 aa0.93□□□□□ -2.26
HMGB3P12-201ENST00000438745 WDR61Q9GZS3 305 aaKnown RBP0.93□□□□□ -2.26
HMGB3P12-201ENST00000438745 A0A1B0GV50 99 aa0.92□□□□□ -2.26
HMGB3P12-201ENST00000438745 F8W036 122 aa0.92□□□□□ -2.26
HMGB3P12-201ENST00000438745 M0QY20 66 aa0.92□□□□□ -2.26
HMGB3P12-201ENST00000438745 M0R378 163 aa0.92□□□□□ -2.26
HMGB3P12-201ENST00000438745 SSSCA1O60232 199 aa0.92□□□□□ -2.26
HMGB3P12-201ENST00000438745 SLC25A6P12236 298 aa0.92□□□□□ -2.26
HMGB3P12-201ENST00000438745 DEFA1P59665 94 aa0.92□□□□□ -2.26
HMGB3P12-201ENST00000438745 RAB5BP61020 215 aa0.92□□□□□ -2.26
HMGB3P12-201ENST00000438745 ZNF345Q14585 488 aa0.92□□□□□ -2.26
HMGB3P12-201ENST00000438745 OR5H6Q8NGV6 325 aa0.92□□□□□ -2.26
HMGB3P12-201ENST00000438745 OR10AG1Q8NH19 301 aa0.92□□□□□ -2.26
HMGB3P12-201ENST00000438745 S100A16Q96FQ6 103 aaKnown RBP0.92□□□□□ -2.26
HMGB3P12-201ENST00000438745 Q96NJ1 140 aa0.92□□□□□ -2.26
HMGB3P12-201ENST00000438745 CYSTM1Q9H1C7 97 aa0.92□□□□□ -2.26
HMGB3P12-201ENST00000438745 NIT2Q9NQR4 276 aa0.92□□□□□ -2.26
HMGB3P12-201ENST00000438745 CDC42SE2Q9NRR3 84 aa0.92□□□□□ -2.26
HMGB3P12-201ENST00000438745 MED9Q9NWA0 146 aa0.92□□□□□ -2.26
HMGB3P12-201ENST00000438745 TOMM7Q9P0U1 55 aa0.92□□□□□ -2.26
HMGB3P12-201ENST00000438745 UBE2L5PA0A1B0GUS4 154 aa0.91□□□□□ -2.26
HMGB3P12-201ENST00000438745 FXYD2P54710 66 aa0.91□□□□□ -2.26
HMGB3P12-201ENST00000438745 AP3S2P59780 193 aa0.91□□□□□ -2.26
HMGB3P12-201ENST00000438745 KHDC3LQ587J8 217 aa0.91□□□□□ -2.26
HMGB3P12-201ENST00000438745 FAM167A-AS1Q96KT0 104 aa0.91□□□□□ -2.26
HMGB3P12-201ENST00000438745 GGACTQ9BVM4 153 aa0.91□□□□□ -2.26
HMGB3P12-201ENST00000438745 LSM2Q9Y333 95 aaKnown RBP0.91□□□□□ -2.26
HMGB3P12-201ENST00000438745 ETDCA0A1B0GVM5 59 aa0.9□□□□□ -2.27
HMGB3P12-201ENST00000438745 SMIM31A0A1B0GVY4 71 aa0.9□□□□□ -2.27
HMGB3P12-201ENST00000438745 C7orf77A4D0Y5 90 aa0.9□□□□□ -2.27
HMGB3P12-201ENST00000438745 CD3DP04234 171 aa0.9□□□□□ -2.27
HMGB3P12-201ENST00000438745 HIST1H2BOP23527 126 aa0.9□□□□□ -2.27
HMGB3P12-201ENST00000438745 HIST1H2BBP33778 126 aa0.9□□□□□ -2.27
HMGB3P12-201ENST00000438745 HIST1H2BDP58876 126 aa0.9□□□□□ -2.27
HMGB3P12-201ENST00000438745 HIST1H2BCP62807 126 aa0.9□□□□□ -2.27
HMGB3P12-201ENST00000438745 CCL20P78556 96 aa0.9□□□□□ -2.27
HMGB3P12-201ENST00000438745 IFITM2Q01629 132 aa0.9□□□□□ -2.27
HMGB3P12-201ENST00000438745 HIST2H2BEQ16778 126 aa0.9□□□□□ -2.27
HMGB3P12-201ENST00000438745 KRTAP20-2Q3LI61 65 aa0.9□□□□□ -2.27
HMGB3P12-201ENST00000438745 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.9□□□□□ -2.27
HMGB3P12-201ENST00000438745 TMEM14EPQ6UXP3 125 aa0.9□□□□□ -2.27
HMGB3P12-201ENST00000438745 SNX29P2Q8IUI4 249 aa0.9□□□□□ -2.27
HMGB3P12-201ENST00000438745 MCFD2Q8NI22 146 aa0.9□□□□□ -2.27
HMGB3P12-201ENST00000438745 ANP32BQ92688 251 aaKnown RBP0.9□□□□□ -2.27
HMGB3P12-201ENST00000438745 HIST1H2BHQ93079 126 aa0.9□□□□□ -2.27
HMGB3P12-201ENST00000438745 HIST1H2BNQ99877 126 aa0.9□□□□□ -2.27
HMGB3P12-201ENST00000438745 HIST1H2BMQ99879 126 aa0.9□□□□□ -2.27
HMGB3P12-201ENST00000438745 FAM107BQ9H098 131 aa0.9□□□□□ -2.27
HMGB3P12-201ENST00000438745 GSKIPQ9P0R6 139 aa0.9□□□□□ -2.27
HMGB3P12-201ENST00000438745 I3L3M4 83 aa0.89□□□□□ -2.27
HMGB3P12-201ENST00000438745 SOSTDC1Q6X4U4 206 aa0.89□□□□□ -2.27
HMGB3P12-201ENST00000438745 ANKRD29Q8N6D5 301 aa0.89□□□□□ -2.27
HMGB3P12-201ENST00000438745 C5orf17Q8NAS9 161 aa0.89□□□□□ -2.27
HMGB3P12-201ENST00000438745 TRDV1A0A1B0GX56 115 aa0.88□□□□□ -2.27
HMGB3P12-201ENST00000438745 C9orf170A2RU37 121 aa0.88□□□□□ -2.27
HMGB3P12-201ENST00000438745 F8VRH5 84 aa0.88□□□□□ -2.27
HMGB3P12-201ENST00000438745 TCL1BO95988 128 aa0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms