RNA–Protein interactions for RNA: ENST00000435781.5

GTF3A-203, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-203ENST00000435781 HSBP1L1C9JCN9 74 aa12.43□□□□□ -0.42
GTF3A-203ENST00000435781 SCGB1D1O95968 90 aa12.42□□□□□ -0.42
GTF3A-203ENST00000435781 CRYGAP11844 174 aa12.41□□□□□ -0.42
GTF3A-203ENST00000435781 TRAV23DV6A0A075B6W5 121 aa12.39□□□□□ -0.43
GTF3A-203ENST00000435781 B5MCH6 92 aa12.39□□□□□ -0.43
GTF3A-203ENST00000435781 FAM229BQ4G0N7 80 aa12.39□□□□□ -0.43
GTF3A-203ENST00000435781 Q6ZVH6 145 aa12.38□□□□□ -0.43
GTF3A-203ENST00000435781 IFITM1P13164 125 aa12.37□□□□□ -0.43
GTF3A-203ENST00000435781 SMCR5Q8TEV8 140 aa12.37□□□□□ -0.43
GTF3A-203ENST00000435781 COPS9Q8WXC6 57 aa12.37□□□□□ -0.43
GTF3A-203ENST00000435781 PPDPFQ9H3Y8 114 aa12.37□□□□□ -0.43
GTF3A-203ENST00000435781 KRTAP13-2Q52LG2 175 aa12.36□□□□□ -0.43
GTF3A-203ENST00000435781 OR13C6PQ8NH95 151 aa12.36□□□□□ -0.43
GTF3A-203ENST00000435781 ZNF73O43830 326 aaPredicted RBP12.35□□□□□ -0.43
GTF3A-203ENST00000435781 Q6ZRX8 168 aa12.35□□□□□ -0.43
GTF3A-203ENST00000435781 LINC00518Q8N0U6 118 aa12.35□□□□□ -0.43
GTF3A-203ENST00000435781 TYMSOSQ8TAI1 123 aa12.35□□□□□ -0.43
GTF3A-203ENST00000435781 SPRR4Q96PI1 79 aa12.35□□□□□ -0.43
GTF3A-203ENST00000435781 CBY1Q9Y3M2 126 aa12.35□□□□□ -0.43
GTF3A-203ENST00000435781 MUSTN1Q8IVN3 82 aa12.34□□□□□ -0.43
GTF3A-203ENST00000435781 ZNF706Q9Y5V0 76 aaPredicted RBP12.34□□□□□ -0.43
GTF3A-203ENST00000435781 LCE2BO14633 110 aa12.32□□□□□ -0.44
GTF3A-203ENST00000435781 Q9BRP9 147 aa12.32□□□□□ -0.44
GTF3A-203ENST00000435781 ERC2-IT1O76042 136 aa12.3□□□□□ -0.44
GTF3A-203ENST00000435781 JOSD1Q15040 202 aaPredicted RBP12.29□□□□□ -0.44
GTF3A-203ENST00000435781 COX8AP10176 69 aa12.27□□□□□ -0.45
GTF3A-203ENST00000435781 HINT1P49773 126 aaPredicted RBP12.27□□□□□ -0.45
GTF3A-203ENST00000435781 C3orf22Q8N5N4 141 aa12.27□□□□□ -0.45
GTF3A-203ENST00000435781 LINC00483Q53H64 154 aa12.24□□□□□ -0.45
GTF3A-203ENST00000435781 TMA7Q9Y2S6 64 aaKnown RBP12.24□□□□□ -0.45
GTF3A-203ENST00000435781 PAM16Q9Y3D7 125 aa12.24□□□□□ -0.45
GTF3A-203ENST00000435781 A6NDN8 102 aa12.23□□□□□ -0.45
GTF3A-203ENST00000435781 GAGE2AQ6NT46 116 aa12.23□□□□□ -0.45
GTF3A-203ENST00000435781 DLEU1O43261 78 aa12.22□□□□□ -0.45
GTF3A-203ENST00000435781 TSPAN13O95857 204 aa12.22□□□□□ -0.45
GTF3A-203ENST00000435781 C6orf99Q4VX62 202 aa12.22□□□□□ -0.45
GTF3A-203ENST00000435781 SPATA45Q537H7 98 aa12.22□□□□□ -0.45
GTF3A-203ENST00000435781 LINC00304Q8N9R0 145 aa12.22□□□□□ -0.45
GTF3A-203ENST00000435781 VAMP8Q9BV40 100 aa12.22□□□□□ -0.45
GTF3A-203ENST00000435781 LRP2P98164 4655 aa12.21□□□□□ -0.45
GTF3A-203ENST00000435781 TRAV13-2A0A0B4J235 113 aa12.2□□□□□ -0.46
GTF3A-203ENST00000435781 COX7BP24311 80 aa12.2□□□□□ -0.46
GTF3A-203ENST00000435781 ELOF1P60002 83 aaKnown RBP12.2□□□□□ -0.46
GTF3A-203ENST00000435781 C14orf144Q96I85 54 aa12.2□□□□□ -0.46
GTF3A-203ENST00000435781 A4D1N5 150 aa12.19□□□□□ -0.46
GTF3A-203ENST00000435781 HIST1H4GQ99525 98 aa12.18□□□□□ -0.46
GTF3A-203ENST00000435781 DHRS4-AS1Q9P1J3 65 aa12.18□□□□□ -0.46
GTF3A-203ENST00000435781 TRBV7-6A0A0J9YX20 115 aa12.17□□□□□ -0.46
GTF3A-203ENST00000435781 ST20-AS1Q8NBB2 130 aa12.17□□□□□ -0.46
GTF3A-203ENST00000435781 UBR4Q5T4S7 5183 aa12.16□□□□□ -0.46
GTF3A-203ENST00000435781 PYY3Q5JQD4 70 aa12.14□□□□□ -0.47
GTF3A-203ENST00000435781 SLC25A34Q6PIV7 304 aa12.14□□□□□ -0.47
GTF3A-203ENST00000435781 SMIM11BQ8TCY0 68 aa12.14□□□□□ -0.47
GTF3A-203ENST00000435781 A0A1B0GWB2 263 aa12.13□□□□□ -0.47
GTF3A-203ENST00000435781 HIGD1BQ9P298 99 aa12.13□□□□□ -0.47
GTF3A-203ENST00000435781 IGLV9-49A0A0B4J1Y8 123 aa12.12□□□□□ -0.47
GTF3A-203ENST00000435781 Q8NBF4 154 aa12.12□□□□□ -0.47
GTF3A-203ENST00000435781 PRR4Q16378 134 aa12.11□□□□□ -0.47
GTF3A-203ENST00000435781 C2orf91Q6ZV80 131 aa12.11□□□□□ -0.47
GTF3A-203ENST00000435781 CTAG1AP78358 180 aa12.1□□□□□ -0.47
GTF3A-203ENST00000435781 MOBPQ13875 183 aa12.1□□□□□ -0.47
GTF3A-203ENST00000435781 C12orf57Q99622 126 aa12.1□□□□□ -0.47
GTF3A-203ENST00000435781 SPAG11AQ6PDA7 123 aa12.09□□□□□ -0.47
GTF3A-203ENST00000435781 LPAP08519 4548 aa12.09□□□□□ -0.47
GTF3A-203ENST00000435781 SPRR1BP22528 89 aa12.08□□□□□ -0.48
GTF3A-203ENST00000435781 C4orf48Q5BLP8 95 aa12.06□□□□□ -0.48
GTF3A-203ENST00000435781 SSBP3-AS1Q7Z2R9 100 aa12.06□□□□□ -0.48
GTF3A-203ENST00000435781 C9orf153Q5TBE3 101 aa12.04□□□□□ -0.48
GTF3A-203ENST00000435781 TAL2Q16559 108 aa12.03□□□□□ -0.48
GTF3A-203ENST00000435781 RETNLBQ9BQ08 111 aa12.03□□□□□ -0.48
GTF3A-203ENST00000435781 VAMP3Q15836 100 aa12.02□□□□□ -0.49
GTF3A-203ENST00000435781 DEFB105AQ8NG35 78 aa12.02□□□□□ -0.49
GTF3A-203ENST00000435781 NHP2Q9NX24 153 aaKnown RBP12.02□□□□□ -0.49
GTF3A-203ENST00000435781 CFC1BP0CG36 223 aa12.01□□□□□ -0.49
GTF3A-203ENST00000435781 CFC1P0CG37 223 aa12.01□□□□□ -0.49
GTF3A-203ENST00000435781 IGLV5-48A0A075B6I7 105 aa11.99□□□□□ -0.49
GTF3A-203ENST00000435781 TEX49A0A1B0GTD5 131 aa11.99□□□□□ -0.49
GTF3A-203ENST00000435781 SPINK1P00995 79 aa11.99□□□□□ -0.49
GTF3A-203ENST00000435781 LINC01547P58512 204 aaPredicted RBP11.99□□□□□ -0.49
GTF3A-203ENST00000435781 CEND1Q8N111 149 aa11.99□□□□□ -0.49
GTF3A-203ENST00000435781 LAMTOR3Q9UHA4 124 aa11.99□□□□□ -0.49
GTF3A-203ENST00000435781 A0A0B4J2C4 111 aa11.98□□□□□ -0.49
GTF3A-203ENST00000435781 LINC00575Q6W349 94 aa11.98□□□□□ -0.49
GTF3A-203ENST00000435781 SLC25A20O43772 301 aa11.97□□□□□ -0.49
GTF3A-203ENST00000435781 RAB37Q96AX2 223 aa11.97□□□□□ -0.49
GTF3A-203ENST00000435781 H7C2G1 150 aa11.96□□□□□ -0.49
GTF3A-203ENST00000435781 Q1RN00 199 aa11.96□□□□□ -0.49
GTF3A-203ENST00000435781 FXYD2P54710 66 aa11.94□□□□□ -0.5
GTF3A-203ENST00000435781 SMIM29Q86T20 159 aa11.94□□□□□ -0.5
GTF3A-203ENST00000435781 TMEM238LA0A1B0GVL6 79 aa11.93□□□□□ -0.5
GTF3A-203ENST00000435781 hADV29S1A0JD25 119 aa11.93□□□□□ -0.5
GTF3A-203ENST00000435781 A6NJY4 79 aa11.93□□□□□ -0.5
GTF3A-203ENST00000435781 RPS29P62273 56 aaKnown RBP11.93□□□□□ -0.5
GTF3A-203ENST00000435781 BVES-AS1Q5T3Y7 98 aa11.93□□□□□ -0.5
GTF3A-203ENST00000435781 Q8N377 158 aa11.92□□□□□ -0.5
GTF3A-203ENST00000435781 HSD52Q0P140 79 aa11.91□□□□□ -0.5
GTF3A-203ENST00000435781 UQCR10Q9UDW1 63 aa11.91□□□□□ -0.5
GTF3A-203ENST00000435781 IGLV7-46A0A075B6I9 117 aa11.9□□□□□ -0.5
GTF3A-203ENST00000435781 Q6ZQY7 126 aa11.9□□□□□ -0.5
GTF3A-203ENST00000435781 PRO1854Q9UHT4 67 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 162.1 ms