RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 C2orf48Q96LS8 159 aa5.52□□□□□ -1.53
CD44-208ENST00000428726 LINC00167Q96N53 147 aa5.52□□□□□ -1.53
CD44-208ENST00000428726 PRKDCP78527 4128 aaKnown RBP5.52□□□□□ -1.53
CD44-208ENST00000428726 Q8N9L7 120 aa5.51□□□□□ -1.53
CD44-208ENST00000428726 IMUPQ9GZP8 106 aa5.51□□□□□ -1.53
CD44-208ENST00000428726 SNURFQ9Y675 71 aa5.51□□□□□ -1.53
CD44-208ENST00000428726 KRTAP1-5Q9BYS1 174 aa5.5□□□□□ -1.53
CD44-208ENST00000428726 CHTF8P0CG12 524 aa5.5□□□□□ -1.53
CD44-208ENST00000428726 DPH3Q96FX2 82 aa5.5□□□□□ -1.53
CD44-208ENST00000428726 TMEM256-PLSCR3K7ERE1 68 aa5.49□□□□□ -1.53
CD44-208ENST00000428726 A0A096LNI7 61 aa5.49□□□□□ -1.53
CD44-208ENST00000428726 ATOX1O00244 68 aa5.49□□□□□ -1.53
CD44-208ENST00000428726 CCKP06307 115 aa5.49□□□□□ -1.53
CD44-208ENST00000428726 SYCNQ0VAF6 134 aa5.49□□□□□ -1.53
CD44-208ENST00000428726 UBE2DNLQ8IWF7 75 aa5.49□□□□□ -1.53
CD44-208ENST00000428726 UPK3BQ9BT76 320 aa5.49□□□□□ -1.53
CD44-208ENST00000428726 JMJD7-PLA2G4BH0Y9G9 81 aa5.48□□□□□ -1.53
CD44-208ENST00000428726 KRTAP26-1Q6PEX3 210 aa5.48□□□□□ -1.53
CD44-208ENST00000428726 PSCAO43653 123 aa5.48□□□□□ -1.53
CD44-208ENST00000428726 IGLV6-57P01721 117 aa5.48□□□□□ -1.53
CD44-208ENST00000428726 LINC01556Q5JQF7 62 aa5.48□□□□□ -1.53
CD44-208ENST00000428726 LINC00575Q6W349 94 aa5.48□□□□□ -1.53
CD44-208ENST00000428726 KMT2AQ03164 3969 aa5.47□□□□□ -1.53
CD44-208ENST00000428726 ZNF73O43830 326 aaPredicted RBP5.47□□□□□ -1.53
CD44-208ENST00000428726 OXTP01178 125 aa5.47□□□□□ -1.53
CD44-208ENST00000428726 DNAH10OSP0CZ25 163 aa5.47□□□□□ -1.53
CD44-208ENST00000428726 RBM3P98179 157 aaKnown RBP5.47□□□□□ -1.53
CD44-208ENST00000428726 ST20-AS1Q8NBB2 130 aa5.47□□□□□ -1.53
CD44-208ENST00000428726 TRAV10A0A0B4J240 114 aa5.47□□□□□ -1.53
CD44-208ENST00000428726 C3orf84H3BNL1 204 aa5.47□□□□□ -1.53
CD44-208ENST00000428726 UBL5Q9BZL1 73 aa5.47□□□□□ -1.53
CD44-208ENST00000428726 STARD9Q9P2P6 4700 aa5.46□□□□□ -1.53
CD44-208ENST00000428726 C4orf26Q17RF5 130 aa5.46□□□□□ -1.53
CD44-208ENST00000428726 SERP2Q8N6R1 65 aa5.46□□□□□ -1.53
CD44-208ENST00000428726 NKAPP1Q8N9T2 125 aa5.46□□□□□ -1.53
CD44-208ENST00000428726 F8WDY8 70 aa5.45□□□□□ -1.54
CD44-208ENST00000428726 Q6JHZ5 121 aa5.45□□□□□ -1.54
CD44-208ENST00000428726 DIRC1Q969H9 104 aa5.45□□□□□ -1.54
CD44-208ENST00000428726 DNAH3Q8TD57 4116 aa5.45□□□□□ -1.54
CD44-208ENST00000428726 VPREB1P12018 145 aa5.45□□□□□ -1.54
CD44-208ENST00000428726 FBN3Q75N90 2809 aa5.45□□□□□ -1.54
CD44-208ENST00000428726 NDUFC2-KCTD14E9PQ53 114 aa5.45□□□□□ -1.54
CD44-208ENST00000428726 H3BQ85 93 aa5.44□□□□□ -1.54
CD44-208ENST00000428726 DEFB116Q30KQ4 102 aa5.44□□□□□ -1.54
CD44-208ENST00000428726 HRCT1Q6UXD1 115 aa5.44□□□□□ -1.54
CD44-208ENST00000428726 COX7BP24311 80 aa5.44□□□□□ -1.54
CD44-208ENST00000428726 C7orf33Q8WU49 177 aa5.44□□□□□ -1.54
CD44-208ENST00000428726 PRLHP81277 87 aa5.43□□□□□ -1.54
CD44-208ENST00000428726 RMI2Q96E14 147 aa5.43□□□□□ -1.54
CD44-208ENST00000428726 J3KT08 172 aa5.43□□□□□ -1.54
CD44-208ENST00000428726 CRYGAP11844 174 aa5.43□□□□□ -1.54
CD44-208ENST00000428726 M0R378 163 aa5.42□□□□□ -1.54
CD44-208ENST00000428726 ERC2-IT1O76042 136 aa5.42□□□□□ -1.54
CD44-208ENST00000428726 TRBV7-6A0A0J9YX20 115 aa5.42□□□□□ -1.54
CD44-208ENST00000428726 LINC01547P58512 204 aaPredicted RBP5.42□□□□□ -1.54
CD44-208ENST00000428726 Q6ZVQ6 151 aa5.42□□□□□ -1.54
CD44-208ENST00000428726 DNAH1Q9P2D7 4330 aa5.42□□□□□ -1.54
CD44-208ENST00000428726 UBE2BP63146 152 aa5.42□□□□□ -1.54
CD44-208ENST00000428726 HIGD2AQ9BW72 106 aa5.42□□□□□ -1.54
CD44-208ENST00000428726 Q6ZQT0 140 aa5.41□□□□□ -1.54
CD44-208ENST00000428726 KRTAP7-1Q8IUC3 87 aa5.41□□□□□ -1.54
CD44-208ENST00000428726 TM2D3Q9BRN9 247 aa5.41□□□□□ -1.54
CD44-208ENST00000428726 ELOF1P60002 83 aaKnown RBP5.4□□□□□ -1.54
CD44-208ENST00000428726 BPY2O14599 106 aa5.4□□□□□ -1.55
CD44-208ENST00000428726 FRAS1Q86XX4 4008 aa5.4□□□□□ -1.55
CD44-208ENST00000428726 LOC110117498A0A087WWA1 95 aa5.39□□□□□ -1.55
CD44-208ENST00000428726 PDE6GP18545 87 aa5.39□□□□□ -1.55
CD44-208ENST00000428726 ATP5EP2Q5VTU8 51 aa5.38□□□□□ -1.55
CD44-208ENST00000428726 PANO1I0J062 215 aa5.38□□□□□ -1.55
CD44-208ENST00000428726 PHF5AQ7RTV0 110 aaKnown RBP5.38□□□□□ -1.55
CD44-208ENST00000428726 KRTAP11-1Q8IUC1 163 aa5.38□□□□□ -1.55
CD44-208ENST00000428726 LRCOL1A6NCL2 159 aa5.37□□□□□ -1.55
CD44-208ENST00000428726 ETDCA0A1B0GVM5 59 aa5.37□□□□□ -1.55
CD44-208ENST00000428726 F8WEM9 126 aa5.37□□□□□ -1.55
CD44-208ENST00000428726 TLX1NBP0CAT3 122 aa5.37□□□□□ -1.55
CD44-208ENST00000428726 Q9BRP9 147 aa5.37□□□□□ -1.55
CD44-208ENST00000428726 TMEM258P61165 79 aa5.35□□□□□ -1.55
CD44-208ENST00000428726 PLA2G2DQ9UNK4 145 aa5.35□□□□□ -1.55
CD44-208ENST00000428726 KCNQ1DNQ9H478 68 aa5.35□□□□□ -1.55
CD44-208ENST00000428726 LINC00474Q9P2X8 69 aa5.35□□□□□ -1.55
CD44-208ENST00000428726 PRR4Q16378 134 aa5.34□□□□□ -1.55
CD44-208ENST00000428726 ANAPC11Q9NYG5 84 aa5.34□□□□□ -1.55
CD44-208ENST00000428726 Q8N377 158 aa5.34□□□□□ -1.55
CD44-208ENST00000428726 MPLKIPQ8TAP9 179 aa5.34□□□□□ -1.55
CD44-208ENST00000428726 FAM236DA0A1B0GTK5 79 aa5.34□□□□□ -1.56
CD44-208ENST00000428726 FAM236CP0DP71 79 aa5.34□□□□□ -1.56
CD44-208ENST00000428726 TRBV7-4A0A0J9YYF1 115 aa5.33□□□□□ -1.56
CD44-208ENST00000428726 MRPL55Q7Z7F7 128 aaKnown RBP5.33□□□□□ -1.56
CD44-208ENST00000428726 H7BZZ5 65 aa5.33□□□□□ -1.56
CD44-208ENST00000428726 IGLV5-37A0A075B6J1 123 aa5.32□□□□□ -1.56
CD44-208ENST00000428726 NREPQ16612 68 aa5.32□□□□□ -1.56
CD44-208ENST00000428726 FAM30AQ9NZY2 134 aa5.32□□□□□ -1.56
CD44-208ENST00000428726 VPS13DQ5THJ4 4388 aa5.32□□□□□ -1.56
CD44-208ENST00000428726 DNAH2Q9P225 4427 aa5.31□□□□□ -1.56
CD44-208ENST00000428726 APLNQ9ULZ1 77 aa5.31□□□□□ -1.56
CD44-208ENST00000428726 PRYO14603 147 aa5.31□□□□□ -1.56
CD44-208ENST00000428726 Q5XG85 94 aa5.31□□□□□ -1.56
CD44-208ENST00000428726 LY6G6CO95867 125 aa5.3□□□□□ -1.56
CD44-208ENST00000428726 DHRS4-AS1Q9P1J3 65 aa5.3□□□□□ -1.56
CD44-208ENST00000428726 DNAH6Q9C0G6 4158 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms