RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 A0A1B0GW54 56 aa8.67□□□□□ -1.02
SPG11-202ENST00000427534 A0A096LNT2 108 aa8.66□□□□□ -1.02
SPG11-202ENST00000427534 CEP350Q5VT06 3117 aa8.66□□□□□ -1.02
SPG11-202ENST00000427534 C9orf129Q5T035 196 aaKnown RBP8.66□□□□□ -1.02
SPG11-202ENST00000427534 LINC00528Q8N1L1 170 aa8.66□□□□□ -1.02
SPG11-202ENST00000427534 IGFL1Q6UW32 110 aa8.65□□□□□ -1.02
SPG11-202ENST00000427534 Q8N1X5 172 aa8.63□□□□□ -1.03
SPG11-202ENST00000427534 MRPL34Q9BQ48 92 aaKnown RBP8.63□□□□□ -1.03
SPG11-202ENST00000427534 M0R2T5 61 aa8.63□□□□□ -1.03
SPG11-202ENST00000427534 F8P00451 2351 aa8.63□□□□□ -1.03
SPG11-202ENST00000427534 EIF4EBP3O60516 100 aaPredicted RBP8.62□□□□□ -1.03
SPG11-202ENST00000427534 LINC01600Q96MT4 127 aa8.62□□□□□ -1.03
SPG11-202ENST00000427534 A8MWP4 228 aa8.61□□□□□ -1.03
SPG11-202ENST00000427534 PSORS1C2Q9UIG4 136 aa8.61□□□□□ -1.03
SPG11-202ENST00000427534 FASNP49327 2511 aaKnown RBP8.61□□□□□ -1.03
SPG11-202ENST00000427534 C19orf73Q9NVV2 129 aa8.6□□□□□ -1.03
SPG11-202ENST00000427534 ZNF861PO60384 105 aa8.6□□□□□ -1.03
SPG11-202ENST00000427534 TNP2Q05952 138 aa8.59□□□□□ -1.03
SPG11-202ENST00000427534 ZNF575Q86XF7 245 aa8.59□□□□□ -1.03
SPG11-202ENST00000427534 GIG44P09565 113 aaPredicted RBP8.59□□□□□ -1.04
SPG11-202ENST00000427534 COA5Q86WW8 74 aa8.56□□□□□ -1.04
SPG11-202ENST00000427534 ERC2-IT1O76042 136 aa8.56□□□□□ -1.04
SPG11-202ENST00000427534 IGLV7-43P04211 117 aa8.56□□□□□ -1.04
SPG11-202ENST00000427534 XIRP2A4UGR9 3374 aa8.55□□□□□ -1.04
SPG11-202ENST00000427534 MKI67P46013 3256 aaKnown RBP8.55□□□□□ -1.04
SPG11-202ENST00000427534 PRR34Q9NV39 138 aa8.54□□□□□ -1.04
SPG11-202ENST00000427534 C8orf17Q9NRJ1 99 aa8.54□□□□□ -1.04
SPG11-202ENST00000427534 BPTFQ12830 3046 aa8.53□□□□□ -1.04
SPG11-202ENST00000427534 EPG5Q9HCE0 2579 aa8.53□□□□□ -1.04
SPG11-202ENST00000427534 IGLV5-48A0A075B6I7 105 aa8.53□□□□□ -1.04
SPG11-202ENST00000427534 KCNQ1DNQ9H478 68 aa8.53□□□□□ -1.04
SPG11-202ENST00000427534 RBM12B-AS1Q9P1G2 102 aa8.53□□□□□ -1.04
SPG11-202ENST00000427534 LINC00612Q8N6U2 182 aa8.53□□□□□ -1.04
SPG11-202ENST00000427534 Q8N377 158 aa8.52□□□□□ -1.05
SPG11-202ENST00000427534 H3BPC8 53 aa8.51□□□□□ -1.05
SPG11-202ENST00000427534 KRTAP1-3Q8IUG1 177 aa8.51□□□□□ -1.05
SPG11-202ENST00000427534 C8orf87E5RJ46 101 aa8.51□□□□□ -1.05
SPG11-202ENST00000427534 BRCA2P51587 3418 aa8.51□□□□□ -1.05
SPG11-202ENST00000427534 A8MUN3 132 aa8.51□□□□□ -1.05
SPG11-202ENST00000427534 PRR26Q8N8Z3 221 aa8.5□□□□□ -1.05
SPG11-202ENST00000427534 LOC101927531A0A1B0GV80 90 aa8.49□□□□□ -1.05
SPG11-202ENST00000427534 PRR15Q8IV56 129 aa8.49□□□□□ -1.05
SPG11-202ENST00000427534 A0A1B0GVX0 72 aa8.49□□□□□ -1.05
SPG11-202ENST00000427534 PLA2G2DQ9UNK4 145 aa8.46□□□□□ -1.05
SPG11-202ENST00000427534 C9orf163Q8N9P6 203 aa8.46□□□□□ -1.06
SPG11-202ENST00000427534 RPS28P62857 69 aaKnown RBP8.45□□□□□ -1.06
SPG11-202ENST00000427534 Q6ZSA8 131 aa8.45□□□□□ -1.06
SPG11-202ENST00000427534 LINC00336Q6ZUF6 198 aa8.44□□□□□ -1.06
SPG11-202ENST00000427534 KRTAP1-1Q07627 177 aa8.44□□□□□ -1.06
SPG11-202ENST00000427534 CRIPTQ9P021 101 aa8.43□□□□□ -1.06
SPG11-202ENST00000427534 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.43□□□□□ -1.06
SPG11-202ENST00000427534 SPRR4Q96PI1 79 aa8.41□□□□□ -1.06
SPG11-202ENST00000427534 PRO0628Q9UI54 55 aa8.41□□□□□ -1.06
SPG11-202ENST00000427534 IGLV7-46A0A075B6I9 117 aa8.4□□□□□ -1.06
SPG11-202ENST00000427534 MIR22HGQ0VDD5 57 aa8.4□□□□□ -1.06
SPG11-202ENST00000427534 HECTD1Q9ULT8 2610 aa8.4□□□□□ -1.06
SPG11-202ENST00000427534 TLX1NBP0CAT3 122 aa8.4□□□□□ -1.06
SPG11-202ENST00000427534 PRRC2CQ9Y520 2896 aaKnown RBP8.4□□□□□ -1.07
SPG11-202ENST00000427534 LAMA3Q16787 3333 aa8.39□□□□□ -1.07
SPG11-202ENST00000427534 USP24Q9UPU5 2620 aa8.38□□□□□ -1.07
SPG11-202ENST00000427534 UQCR11O14957 56 aa8.36□□□□□ -1.07
SPG11-202ENST00000427534 FLNBO75369 2602 aaKnown RBP8.32□□□□□ -1.08
SPG11-202ENST00000427534 CFAP54Q96N23 3096 aa8.31□□□□□ -1.08
SPG11-202ENST00000427534 A0A1W2PNM2 257 aa8.3□□□□□ -1.08
SPG11-202ENST00000427534 CNBPP62633 177 aaKnown RBP8.29□□□□□ -1.08
SPG11-202ENST00000427534 CAMK2N1Q7Z7J9 78 aa8.29□□□□□ -1.08
SPG11-202ENST00000427534 CELSR3Q9NYQ7 3312 aa8.28□□□□□ -1.08
SPG11-202ENST00000427534 CR1P17927 2039 aa8.28□□□□□ -1.08
SPG11-202ENST00000427534 FAM104AQ969W3 186 aa8.28□□□□□ -1.08
SPG11-202ENST00000427534 MGAM2Q2M2H8 2515 aa8.28□□□□□ -1.08
SPG11-202ENST00000427534 KLKP1Q107X0 134 aa8.27□□□□□ -1.09
SPG11-202ENST00000427534 PRUNE2Q8WUY3 3088 aa8.27□□□□□ -1.09
SPG11-202ENST00000427534 CDH23Q9H251 3354 aa8.26□□□□□ -1.09
SPG11-202ENST00000427534 Q5VSD8 79 aa8.23□□□□□ -1.09
SPG11-202ENST00000427534 CHD7Q9P2D1 2997 aa8.21□□□□□ -1.1
SPG11-202ENST00000427534 UNC80Q8N2C7 3258 aa8.21□□□□□ -1.1
SPG11-202ENST00000427534 CDC42SE1Q9NRR8 79 aa8.2□□□□□ -1.1
SPG11-202ENST00000427534 SZT2Q5T011 3432 aa8.19□□□□□ -1.1
SPG11-202ENST00000427534 H7BZZ5 65 aa8.19□□□□□ -1.1
SPG11-202ENST00000427534 RANBP2P49792 3224 aaKnown RBP8.19□□□□□ -1.1
SPG11-202ENST00000427534 DNAH14Q0VDD8 3507 aa8.19□□□□□ -1.1
SPG11-202ENST00000427534 LAMA2P24043 3122 aaKnown RBP8.18□□□□□ -1.1
SPG11-202ENST00000427534 CYP4F30PQ9H0H9 118 aa8.18□□□□□ -1.1
SPG11-202ENST00000427534 FLNAP21333 2647 aaKnown RBP8.15□□□□□ -1.1
SPG11-202ENST00000427534 TRIOO75962 3097 aa8.14□□□□□ -1.11
SPG11-202ENST00000427534 S4R3F8 94 aa8.14□□□□□ -1.11
SPG11-202ENST00000427534 KRTAP10-2P60368 255 aa8.14□□□□□ -1.11
SPG11-202ENST00000427534 CHD9Q3L8U1 2897 aa8.12□□□□□ -1.11
SPG11-202ENST00000427534 WIPF1O43516 503 aa8.12□□□□□ -1.11
SPG11-202ENST00000427534 CD164Q04900 197 aa8.1□□□□□ -1.11
SPG11-202ENST00000427534 HRES1P13985 223 aa8.1□□□□□ -1.11
SPG11-202ENST00000427534 ITPR3Q14573 2671 aa8.09□□□□□ -1.11
SPG11-202ENST00000427534 KRTAP10-1P60331 282 aa8.09□□□□□ -1.11
SPG11-202ENST00000427534 Q8N9P0 234 aaPredicted RBP8.09□□□□□ -1.11
SPG11-202ENST00000427534 FREM2Q5SZK8 3169 aa8.09□□□□□ -1.11
SPG11-202ENST00000427534 A0A0C4DFX4 3053 aa8.09□□□□□ -1.12
SPG11-202ENST00000427534 KRTAP1-5Q9BYS1 174 aa8.08□□□□□ -1.12
SPG11-202ENST00000427534 Q8NDZ9 215 aa8.07□□□□□ -1.12
SPG11-202ENST00000427534 SPANXA2-OT1Q8N9U9 137 aa8.06□□□□□ -1.12
SPG11-202ENST00000427534 HTTP42858 3142 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms