RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 Q6ZTC4 211 aa10.96□□□□□ -0.65
NPC1L1-203ENST00000423141 TRRAPQ9Y4A5 3859 aa10.96□□□□□ -0.65
NPC1L1-203ENST00000423141 WFDC10BQ8IUB3 73 aa10.94□□□□□ -0.66
NPC1L1-203ENST00000423141 EGFEM1PQ0D2K5 195 aa10.94□□□□□ -0.66
NPC1L1-203ENST00000423141 FAM30AQ9NZY2 134 aa10.94□□□□□ -0.66
NPC1L1-203ENST00000423141 Q6ZRP5 223 aa10.93□□□□□ -0.66
NPC1L1-203ENST00000423141 SMIM29Q86T20 159 aa10.93□□□□□ -0.66
NPC1L1-203ENST00000423141 ESRGQ1W209 222 aa10.93□□□□□ -0.66
NPC1L1-203ENST00000423141 SPART-AS1P0CW21 52 aa10.92□□□□□ -0.66
NPC1L1-203ENST00000423141 Q8N377 158 aa10.92□□□□□ -0.66
NPC1L1-203ENST00000423141 C15orf56Q8N910 161 aa10.92□□□□□ -0.66
NPC1L1-203ENST00000423141 TENM4Q6N022 2769 aa10.92□□□□□ -0.66
NPC1L1-203ENST00000423141 KRTAP26-1Q6PEX3 210 aa10.92□□□□□ -0.66
NPC1L1-203ENST00000423141 APOC4P55056 127 aa10.9□□□□□ -0.66
NPC1L1-203ENST00000423141 KPRPQ5T749 579 aaPredicted RBP10.89□□□□□ -0.67
NPC1L1-203ENST00000423141 LRCOL1A6NCL2 159 aa10.88□□□□□ -0.67
NPC1L1-203ENST00000423141 SERTAD4-AS1Q5TG53 156 aa10.87□□□□□ -0.67
NPC1L1-203ENST00000423141 A0A1W2PNM2 257 aa10.86□□□□□ -0.67
NPC1L1-203ENST00000423141 TEP1Q99973 2627 aaKnown RBP10.86□□□□□ -0.67
NPC1L1-203ENST00000423141 IGLV5-48A0A075B6I7 105 aa10.86□□□□□ -0.67
NPC1L1-203ENST00000423141 SMR3AQ99954 134 aa10.85□□□□□ -0.67
NPC1L1-203ENST00000423141 C7orf33Q8WU49 177 aa10.84□□□□□ -0.67
NPC1L1-203ENST00000423141 NOTCH2Q04721 2471 aa10.84□□□□□ -0.67
NPC1L1-203ENST00000423141 KCNQ1DNQ9H478 68 aa10.84□□□□□ -0.67
NPC1L1-203ENST00000423141 NKAPP1Q8N9T2 125 aa10.82□□□□□ -0.68
NPC1L1-203ENST00000423141 ATRQ13535 2644 aa10.82□□□□□ -0.68
NPC1L1-203ENST00000423141 ST20-AS1Q8NBB2 130 aa10.82□□□□□ -0.68
NPC1L1-203ENST00000423141 hDV103S1A0JD37 113 aa10.81□□□□□ -0.68
NPC1L1-203ENST00000423141 RPL37AP8A6NKH3 93 aa10.81□□□□□ -0.68
NPC1L1-203ENST00000423141 Q9BRP9 147 aa10.81□□□□□ -0.68
NPC1L1-203ENST00000423141 C1orf195Q5TG92 126 aa10.8□□□□□ -0.68
NPC1L1-203ENST00000423141 LCE6AA0A183 80 aa10.8□□□□□ -0.68
NPC1L1-203ENST00000423141 C1orf137Q5JT78 98 aa10.8□□□□□ -0.68
NPC1L1-203ENST00000423141 F8P00451 2351 aa10.79□□□□□ -0.68
NPC1L1-203ENST00000423141 C1orf64Q8NEQ6 169 aa10.79□□□□□ -0.68
NPC1L1-203ENST00000423141 K7EQZ3 153 aa10.78□□□□□ -0.68
NPC1L1-203ENST00000423141 DSCR10P59022 87 aa10.78□□□□□ -0.68
NPC1L1-203ENST00000423141 SYCNQ0VAF6 134 aa10.78□□□□□ -0.68
NPC1L1-203ENST00000423141 IGKV2D-24A0A075B6R9 120 aa10.78□□□□□ -0.68
NPC1L1-203ENST00000423141 FAM168BA1KXE4 195 aa10.78□□□□□ -0.68
NPC1L1-203ENST00000423141 TNP2Q05952 138 aa10.77□□□□□ -0.68
NPC1L1-203ENST00000423141 FASNP49327 2511 aaKnown RBP10.77□□□□□ -0.68
NPC1L1-203ENST00000423141 Q6ZRX8 168 aa10.77□□□□□ -0.69
NPC1L1-203ENST00000423141 PRR4Q16378 134 aa10.76□□□□□ -0.69
NPC1L1-203ENST00000423141 ZCCHC13Q8WW36 166 aaKnown RBP10.76□□□□□ -0.69
NPC1L1-203ENST00000423141 Q8NBF4 154 aa10.76□□□□□ -0.69
NPC1L1-203ENST00000423141 RETNQ9HD89 108 aa10.75□□□□□ -0.69
NPC1L1-203ENST00000423141 TENM3Q9P273 2699 aa10.75□□□□□ -0.69
NPC1L1-203ENST00000423141 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.74□□□□□ -0.69
NPC1L1-203ENST00000423141 KRTAP4-16G5E9R7 235 aaPredicted RBP10.74□□□□□ -0.69
NPC1L1-203ENST00000423141 HELZ2Q9BYK8 2649 aaKnown RBP10.74□□□□□ -0.69
NPC1L1-203ENST00000423141 A0A0G2JQZ4 141 aa10.73□□□□□ -0.69
NPC1L1-203ENST00000423141 A0A1W2PNN7 141 aa10.73□□□□□ -0.69
NPC1L1-203ENST00000423141 DHRS4-AS1Q9P1J3 65 aa10.73□□□□□ -0.69
NPC1L1-203ENST00000423141 ETDCA0A1B0GVM5 59 aa10.73□□□□□ -0.69
NPC1L1-203ENST00000423141 ANK2Q01484 3957 aa10.73□□□□□ -0.69
NPC1L1-203ENST00000423141 BAHCC1Q9P281 2608 aa10.73□□□□□ -0.69
NPC1L1-203ENST00000423141 OTOGQ6ZRI0 2925 aa10.72□□□□□ -0.69
NPC1L1-203ENST00000423141 PRB2P02812 416 aaPredicted RBP10.72□□□□□ -0.69
NPC1L1-203ENST00000423141 SPRR4Q96PI1 79 aa10.71□□□□□ -0.69
NPC1L1-203ENST00000423141 PSPHP1O15172 72 aa10.7□□□□□ -0.7
NPC1L1-203ENST00000423141 IGLV1-50A0A075B6I6 118 aa10.7□□□□□ -0.7
NPC1L1-203ENST00000423141 A0A1B0GW54 56 aa10.7□□□□□ -0.7
NPC1L1-203ENST00000423141 KRTAP7-1Q8IUC3 87 aa10.7□□□□□ -0.7
NPC1L1-203ENST00000423141 F8WDY8 70 aa10.69□□□□□ -0.7
NPC1L1-203ENST00000423141 Q1T7F1 81 aa10.69□□□□□ -0.7
NPC1L1-203ENST00000423141 DEFB116Q30KQ4 102 aa10.69□□□□□ -0.7
NPC1L1-203ENST00000423141 V9GYY9 64 aa10.69□□□□□ -0.7
NPC1L1-203ENST00000423141 SPRR1AP35321 89 aa10.67□□□□□ -0.7
NPC1L1-203ENST00000423141 HCG22E2RYF7 251 aa10.66□□□□□ -0.7
NPC1L1-203ENST00000423141 H3BNG1 76 aa10.66□□□□□ -0.7
NPC1L1-203ENST00000423141 NSD1Q96L73 2696 aaPredicted RBP10.65□□□□□ -0.7
NPC1L1-203ENST00000423141 LINC01556Q5JQF7 62 aa10.65□□□□□ -0.7
NPC1L1-203ENST00000423141 TRAV22A0A0B4J277 110 aa10.65□□□□□ -0.71
NPC1L1-203ENST00000423141 PSCAO43653 123 aa10.65□□□□□ -0.71
NPC1L1-203ENST00000423141 CASC10Q5T4H9 136 aa10.65□□□□□ -0.71
NPC1L1-203ENST00000423141 UBE2BP63146 152 aa10.64□□□□□ -0.71
NPC1L1-203ENST00000423141 WFDC13Q8IUB5 93 aa10.63□□□□□ -0.71
NPC1L1-203ENST00000423141 PRR15Q8IV56 129 aa10.63□□□□□ -0.71
NPC1L1-203ENST00000423141 LINC00476Q8WZB0 136 aa10.63□□□□□ -0.71
NPC1L1-203ENST00000423141 PLA2G2DQ9UNK4 145 aa10.62□□□□□ -0.71
NPC1L1-203ENST00000423141 TLX1NBP0CAT3 122 aa10.62□□□□□ -0.71
NPC1L1-203ENST00000423141 CYP4F30PQ9H0H9 118 aa10.61□□□□□ -0.71
NPC1L1-203ENST00000423141 IGLV5-37A0A075B6J1 123 aa10.59□□□□□ -0.71
NPC1L1-203ENST00000423141 SEC61GP60059 68 aa10.59□□□□□ -0.71
NPC1L1-203ENST00000423141 MRPL55Q7Z7F7 128 aaKnown RBP10.59□□□□□ -0.71
NPC1L1-203ENST00000423141 IGFL1Q6UW32 110 aa10.58□□□□□ -0.72
NPC1L1-203ENST00000423141 DNAH1Q9P2D7 4330 aa10.58□□□□□ -0.72
NPC1L1-203ENST00000423141 SRRM2Q9UQ35 2752 aaKnown RBP10.58□□□□□ -0.72
NPC1L1-203ENST00000423141 A8MU10 97 aa10.57□□□□□ -0.72
NPC1L1-203ENST00000423141 A8MUN3 132 aa10.57□□□□□ -0.72
NPC1L1-203ENST00000423141 RPL37AP61513 92 aaKnown RBP10.57□□□□□ -0.72
NPC1L1-203ENST00000423141 HECTD1Q9ULT8 2610 aa10.56□□□□□ -0.72
NPC1L1-203ENST00000423141 INAFM1C9JVW0 142 aa10.56□□□□□ -0.72
NPC1L1-203ENST00000423141 FLNBO75369 2602 aaKnown RBP10.55□□□□□ -0.72
NPC1L1-203ENST00000423141 DEFB131BA0A096LNP1 70 aa10.55□□□□□ -0.72
NPC1L1-203ENST00000423141 A0A087WSZ3 146 aa10.55□□□□□ -0.72
NPC1L1-203ENST00000423141 LINC00208Q96KT6 92 aa10.55□□□□□ -0.72
NPC1L1-203ENST00000423141 OXLD1Q5BKU9 147 aa10.54□□□□□ -0.72
NPC1L1-203ENST00000423141 REG3GQ6UW15 175 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms