RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 SLC25A34Q6PIV7 304 aa5.65□□□□□ -1.5
PDGFC-202ENST00000422544 COPS9Q8WXC6 57 aa5.65□□□□□ -1.5
PDGFC-202ENST00000422544 TMEM126AQ9H061 195 aa5.65□□□□□ -1.5
PDGFC-202ENST00000422544 ZNF861PO60384 105 aa5.64□□□□□ -1.51
PDGFC-202ENST00000422544 IGLV6-57P01721 117 aa5.64□□□□□ -1.51
PDGFC-202ENST00000422544 KCNQ1DNQ9H478 68 aa5.64□□□□□ -1.51
PDGFC-202ENST00000422544 PRYO14603 147 aa5.63□□□□□ -1.51
PDGFC-202ENST00000422544 UBE2AP49459 152 aa5.63□□□□□ -1.51
PDGFC-202ENST00000422544 S100A12P80511 92 aa5.63□□□□□ -1.51
PDGFC-202ENST00000422544 FAM19A1Q7Z5A9 133 aa5.63□□□□□ -1.51
PDGFC-202ENST00000422544 LINC00518Q8N0U6 118 aa5.63□□□□□ -1.51
PDGFC-202ENST00000422544 OR13C6PQ8NH95 151 aa5.63□□□□□ -1.51
PDGFC-202ENST00000422544 HIST1H4GQ99525 98 aa5.63□□□□□ -1.51
PDGFC-202ENST00000422544 PPDPFQ9H3Y8 114 aa5.63□□□□□ -1.51
PDGFC-202ENST00000422544 LOC105371267A0A1B0GV96 52 aa5.62□□□□□ -1.51
PDGFC-202ENST00000422544 RPL28P46779 137 aaKnown RBP5.62□□□□□ -1.51
PDGFC-202ENST00000422544 PRLHP81277 87 aa5.62□□□□□ -1.51
PDGFC-202ENST00000422544 C2orf91Q6ZV80 131 aa5.62□□□□□ -1.51
PDGFC-202ENST00000422544 KRTAP13-1Q8IUC0 172 aa5.62□□□□□ -1.51
PDGFC-202ENST00000422544 LINC00337Q8N6G1 96 aa5.62□□□□□ -1.51
PDGFC-202ENST00000422544 DIRC1Q969H9 104 aa5.62□□□□□ -1.51
PDGFC-202ENST00000422544 TRAV23DV6A0A075B6W5 121 aa5.61□□□□□ -1.51
PDGFC-202ENST00000422544 A4D1N5 150 aa5.61□□□□□ -1.51
PDGFC-202ENST00000422544 H0Y9J4 135 aa5.61□□□□□ -1.51
PDGFC-202ENST00000422544 SPRR1AP35321 89 aa5.61□□□□□ -1.51
PDGFC-202ENST00000422544 HIGD1BQ9P298 99 aa5.61□□□□□ -1.51
PDGFC-202ENST00000422544 ETDCA0A1B0GVM5 59 aa5.6□□□□□ -1.51
PDGFC-202ENST00000422544 A6NDN8 102 aa5.6□□□□□ -1.51
PDGFC-202ENST00000422544 KRTAP4-16G5E9R7 235 aaPredicted RBP5.6□□□□□ -1.51
PDGFC-202ENST00000422544 KRTAP29-1A8MX34 341 aaPredicted RBP5.59□□□□□ -1.51
PDGFC-202ENST00000422544 ZNF73O43830 326 aaPredicted RBP5.59□□□□□ -1.51
PDGFC-202ENST00000422544 OXTP01178 125 aa5.59□□□□□ -1.51
PDGFC-202ENST00000422544 TRAV13-2A0A0B4J235 113 aa5.58□□□□□ -1.52
PDGFC-202ENST00000422544 B5MCH6 92 aa5.58□□□□□ -1.52
PDGFC-202ENST00000422544 SMIM6P0DI80 62 aa5.58□□□□□ -1.52
PDGFC-202ENST00000422544 C12orf57Q99622 126 aa5.58□□□□□ -1.52
PDGFC-202ENST00000422544 HIGD2AQ9BW72 106 aa5.58□□□□□ -1.52
PDGFC-202ENST00000422544 UQCR10Q9UDW1 63 aa5.58□□□□□ -1.52
PDGFC-202ENST00000422544 CBY1Q9Y3M2 126 aa5.58□□□□□ -1.52
PDGFC-202ENST00000422544 TAL2Q16559 108 aa5.57□□□□□ -1.52
PDGFC-202ENST00000422544 LINC01600Q96MT4 127 aa5.57□□□□□ -1.52
PDGFC-202ENST00000422544 PRO1933Q9H354 126 aa5.57□□□□□ -1.52
PDGFC-202ENST00000422544 KRTAP1-4P0C5Y4 121 aa5.56□□□□□ -1.52
PDGFC-202ENST00000422544 HINT1P49773 126 aaPredicted RBP5.56□□□□□ -1.52
PDGFC-202ENST00000422544 C6orf99Q4VX62 202 aa5.56□□□□□ -1.52
PDGFC-202ENST00000422544 CEND1Q8N111 149 aa5.56□□□□□ -1.52
PDGFC-202ENST00000422544 SMCR5Q8TEV8 140 aa5.56□□□□□ -1.52
PDGFC-202ENST00000422544 CFC1BP0CG36 223 aa5.55□□□□□ -1.52
PDGFC-202ENST00000422544 CFC1P0CG37 223 aa5.55□□□□□ -1.52
PDGFC-202ENST00000422544 Q6ZRX8 168 aa5.55□□□□□ -1.52
PDGFC-202ENST00000422544 SMIM11BQ8TCY0 68 aa5.55□□□□□ -1.52
PDGFC-202ENST00000422544 ANAPC11Q9NYG5 84 aa5.55□□□□□ -1.52
PDGFC-202ENST00000422544 ERC2-IT1O76042 136 aa5.54□□□□□ -1.52
PDGFC-202ENST00000422544 MT1HL1P0DM35 61 aa5.54□□□□□ -1.52
PDGFC-202ENST00000422544 FXYD2P54710 66 aa5.54□□□□□ -1.52
PDGFC-202ENST00000422544 HSD52Q0P140 79 aa5.54□□□□□ -1.52
PDGFC-202ENST00000422544 PRR26Q8N8Z3 221 aa5.54□□□□□ -1.52
PDGFC-202ENST00000422544 Q9BRP9 147 aa5.54□□□□□ -1.52
PDGFC-202ENST00000422544 LPAP08519 4548 aa5.53□□□□□ -1.52
PDGFC-202ENST00000422544 H3BS24 57 aa5.53□□□□□ -1.52
PDGFC-202ENST00000422544 COX7BP24311 80 aa5.53□□□□□ -1.52
PDGFC-202ENST00000422544 RPL13AP40429 203 aaKnown RBP5.53□□□□□ -1.52
PDGFC-202ENST00000422544 KRTAP10-8P60410 259 aa5.53□□□□□ -1.52
PDGFC-202ENST00000422544 RAB37Q96AX2 223 aa5.53□□□□□ -1.52
PDGFC-202ENST00000422544 H7C2G1 150 aa5.52□□□□□ -1.53
PDGFC-202ENST00000422544 ELOF1P60002 83 aaKnown RBP5.52□□□□□ -1.53
PDGFC-202ENST00000422544 SPRR4Q96PI1 79 aa5.52□□□□□ -1.53
PDGFC-202ENST00000422544 A0A0B4J2C4 111 aa5.51□□□□□ -1.53
PDGFC-202ENST00000422544 TRBV7-6A0A0J9YX20 115 aa5.51□□□□□ -1.53
PDGFC-202ENST00000422544 A0A087X002 238 aa5.5□□□□□ -1.53
PDGFC-202ENST00000422544 A0A1B0GWB2 263 aa5.5□□□□□ -1.53
PDGFC-202ENST00000422544 CRYGAP11844 174 aa5.5□□□□□ -1.53
PDGFC-202ENST00000422544 GAGE2AQ6NT46 116 aa5.5□□□□□ -1.53
PDGFC-202ENST00000422544 ST20-AS1Q8NBB2 130 aa5.5□□□□□ -1.53
PDGFC-202ENST00000422544 DHRS4-AS1Q9P1J3 65 aa5.5□□□□□ -1.53
PDGFC-202ENST00000422544 ZNF706Q9Y5V0 76 aaPredicted RBP5.5□□□□□ -1.53
PDGFC-202ENST00000422544 CTAG1AP78358 180 aa5.49□□□□□ -1.53
PDGFC-202ENST00000422544 VAMP3Q15836 100 aa5.49□□□□□ -1.53
PDGFC-202ENST00000422544 FAM229BQ4G0N7 80 aa5.49□□□□□ -1.53
PDGFC-202ENST00000422544 BVES-AS1Q5T3Y7 98 aa5.49□□□□□ -1.53
PDGFC-202ENST00000422544 NHP2Q9NX24 153 aaKnown RBP5.49□□□□□ -1.53
PDGFC-202ENST00000422544 PRO1854Q9UHT4 67 aa5.49□□□□□ -1.53
PDGFC-202ENST00000422544 TSTD3H0UI37 97 aa5.48□□□□□ -1.53
PDGFC-202ENST00000422544 K7ERJ3 54 aa5.48□□□□□ -1.53
PDGFC-202ENST00000422544 Q1RN00 199 aa5.47□□□□□ -1.53
PDGFC-202ENST00000422544 KRTAP13-2Q52LG2 175 aa5.47□□□□□ -1.53
PDGFC-202ENST00000422544 LINC00483Q53H64 154 aa5.47□□□□□ -1.53
PDGFC-202ENST00000422544 LINC00575Q6W349 94 aa5.46□□□□□ -1.54
PDGFC-202ENST00000422544 C3orf22Q8N5N4 141 aa5.46□□□□□ -1.54
PDGFC-202ENST00000422544 DEFB105AQ8NG35 78 aa5.46□□□□□ -1.54
PDGFC-202ENST00000422544 TYMSOSQ8TAI1 123 aa5.46□□□□□ -1.54
PDGFC-202ENST00000422544 FAT4Q6V0I7 4981 aa5.46□□□□□ -1.54
PDGFC-202ENST00000422544 SLC25A20O43772 301 aa5.45□□□□□ -1.54
PDGFC-202ENST00000422544 hADV29S1A0JD25 119 aa5.44□□□□□ -1.54
PDGFC-202ENST00000422544 M0R143 59 aa5.44□□□□□ -1.54
PDGFC-202ENST00000422544 H0YGX0 51 aa5.43□□□□□ -1.54
PDGFC-202ENST00000422544 TRIAP1O43715 76 aa5.43□□□□□ -1.54
PDGFC-202ENST00000422544 PSMB2P49721 201 aa5.43□□□□□ -1.54
PDGFC-202ENST00000422544 IGLV9-49A0A0B4J1Y8 123 aa5.42□□□□□ -1.54
PDGFC-202ENST00000422544 TEX49A0A1B0GTD5 131 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 239 ms