RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 LOC107984156A0A0G2JMH3 177 aa5.33□□□□□ -1.56
NUP50-206ENST00000422489 TRBV10-2A0A0K0K1G8 114 aa5.33□□□□□ -1.56
NUP50-206ENST00000422489 ERC2-IT1O76042 136 aa5.33□□□□□ -1.56
NUP50-206ENST00000422489 ADAMTSL4-AS1Q5T5F5 129 aa5.33□□□□□ -1.56
NUP50-206ENST00000422489 ARL17AQ8IVW1 177 aa5.33□□□□□ -1.56
NUP50-206ENST00000422489 SPANXB1Q9NS25 103 aaPredicted RBP5.33□□□□□ -1.56
NUP50-206ENST00000422489 IGLV9-49A0A0B4J1Y8 123 aa5.32□□□□□ -1.56
NUP50-206ENST00000422489 A0A0J9YXY3 114 aa5.32□□□□□ -1.56
NUP50-206ENST00000422489 E9PLD3 99 aa5.32□□□□□ -1.56
NUP50-206ENST00000422489 SYS1-DBNDD2H3BUS1 97 aa5.32□□□□□ -1.56
NUP50-206ENST00000422489 CTAG1AP78358 180 aa5.32□□□□□ -1.56
NUP50-206ENST00000422489 TRAV23DV6A0A075B6W5 121 aa5.31□□□□□ -1.56
NUP50-206ENST00000422489 HIST1H2BKO60814 126 aa5.31□□□□□ -1.56
NUP50-206ENST00000422489 NDUFC2O95298 119 aa5.31□□□□□ -1.56
NUP50-206ENST00000422489 HIST1H2BJP06899 126 aa5.31□□□□□ -1.56
NUP50-206ENST00000422489 HIST1H2BOP23527 126 aa5.31□□□□□ -1.56
NUP50-206ENST00000422489 HIST1H2BBP33778 126 aa5.31□□□□□ -1.56
NUP50-206ENST00000422489 HIST1H2BDP58876 126 aa5.31□□□□□ -1.56
NUP50-206ENST00000422489 HIST1H2BCP62807 126 aa5.31□□□□□ -1.56
NUP50-206ENST00000422489 HIST2H2BEQ16778 126 aa5.31□□□□□ -1.56
NUP50-206ENST00000422489 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.31□□□□□ -1.56
NUP50-206ENST00000422489 SOSTDC1Q6X4U4 206 aa5.31□□□□□ -1.56
NUP50-206ENST00000422489 HIST1H2BHQ93079 126 aa5.31□□□□□ -1.56
NUP50-206ENST00000422489 HIST1H2BNQ99877 126 aa5.31□□□□□ -1.56
NUP50-206ENST00000422489 HIST1H2BMQ99879 126 aa5.31□□□□□ -1.56
NUP50-206ENST00000422489 A0A0U1RQV1 116 aa5.3□□□□□ -1.56
NUP50-206ENST00000422489 IGLV6-57P01721 117 aa5.3□□□□□ -1.56
NUP50-206ENST00000422489 MOBPQ13875 183 aa5.3□□□□□ -1.56
NUP50-206ENST00000422489 JOSD1Q15040 202 aaPredicted RBP5.3□□□□□ -1.56
NUP50-206ENST00000422489 LINC00483Q53H64 154 aa5.3□□□□□ -1.56
NUP50-206ENST00000422489 OR13C6PQ8NH95 151 aa5.3□□□□□ -1.56
NUP50-206ENST00000422489 Q9BRP9 147 aa5.3□□□□□ -1.56
NUP50-206ENST00000422489 ZNF73O43830 326 aaPredicted RBP5.29□□□□□ -1.56
NUP50-206ENST00000422489 SPINK1P00995 79 aa5.29□□□□□ -1.56
NUP50-206ENST00000422489 HINT1P49773 126 aaPredicted RBP5.29□□□□□ -1.56
NUP50-206ENST00000422489 TPRXLQ17RH7 258 aa5.29□□□□□ -1.56
NUP50-206ENST00000422489 PET117Q6UWS5 81 aa5.29□□□□□ -1.56
NUP50-206ENST00000422489 Q6ZRX8 168 aa5.29□□□□□ -1.56
NUP50-206ENST00000422489 SSBP3-AS1Q7Z2R9 100 aa5.29□□□□□ -1.56
NUP50-206ENST00000422489 LINC00308Q8TCZ7 52 aa5.29□□□□□ -1.56
NUP50-206ENST00000422489 ZNF815PA8K554 130 aa5.27□□□□□ -1.57
NUP50-206ENST00000422489 KRTDAPP60985 99 aa5.27□□□□□ -1.57
NUP50-206ENST00000422489 C9orf153Q5TBE3 101 aa5.27□□□□□ -1.57
NUP50-206ENST00000422489 LINC01545Q5VT33 79 aa5.27□□□□□ -1.57
NUP50-206ENST00000422489 FP248Q71RG6 208 aaPredicted RBP5.27□□□□□ -1.57
NUP50-206ENST00000422489 ST20-AS1Q8NBB2 130 aa5.27□□□□□ -1.57
NUP50-206ENST00000422489 TTTY13Q9BZ97 58 aa5.27□□□□□ -1.57
NUP50-206ENST00000422489 CBY1Q9Y3M2 126 aa5.27□□□□□ -1.57
NUP50-206ENST00000422489 TIMM17BO60830 172 aa5.26□□□□□ -1.57
NUP50-206ENST00000422489 C3orf79P0CE67 100 aa5.26□□□□□ -1.57
NUP50-206ENST00000422489 SPANXCQ9NY87 97 aa5.26□□□□□ -1.57
NUP50-206ENST00000422489 LITAFQ99732 161 aa5.25□□□□□ -1.57
NUP50-206ENST00000422489 C21orf62-AS1Q17RA5 79 aa5.24□□□□□ -1.57
NUP50-206ENST00000422489 SLC25A20O43772 301 aa5.23□□□□□ -1.57
NUP50-206ENST00000422489 COX7BP24311 80 aa5.23□□□□□ -1.57
NUP50-206ENST00000422489 KRTAP13-3Q3SY46 172 aa5.23□□□□□ -1.57
NUP50-206ENST00000422489 SCGB1D4Q6XE38 83 aa5.23□□□□□ -1.57
NUP50-206ENST00000422489 LINC00518Q8N0U6 118 aa5.23□□□□□ -1.57
NUP50-206ENST00000422489 SPANXDQ9BXN6 97 aa5.23□□□□□ -1.57
NUP50-206ENST00000422489 MUC2Q02817 5179 aa5.22□□□□□ -1.57
NUP50-206ENST00000422489 C20orf202A1L168 122 aa5.22□□□□□ -1.57
NUP50-206ENST00000422489 TAL2Q16559 108 aa5.22□□□□□ -1.57
NUP50-206ENST00000422489 HRCT1Q6UXD1 115 aa5.22□□□□□ -1.57
NUP50-206ENST00000422489 ATOH7Q8N100 152 aa5.22□□□□□ -1.57
NUP50-206ENST00000422489 Q8N377 158 aa5.22□□□□□ -1.57
NUP50-206ENST00000422489 DEFB105AQ8NG35 78 aa5.22□□□□□ -1.57
NUP50-206ENST00000422489 DHRS4-AS1Q9P1J3 65 aa5.22□□□□□ -1.57
NUP50-206ENST00000422489 A6NDN8 102 aa5.21□□□□□ -1.58
NUP50-206ENST00000422489 C5orf52A6NGY3 159 aa5.21□□□□□ -1.58
NUP50-206ENST00000422489 C6orf99Q4VX62 202 aa5.21□□□□□ -1.58
NUP50-206ENST00000422489 ANKRD39Q53RE8 183 aa5.21□□□□□ -1.58
NUP50-206ENST00000422489 COA6Q5JTJ3 125 aaKnown RBP5.21□□□□□ -1.58
NUP50-206ENST00000422489 LCE1DQ5T752 114 aa5.21□□□□□ -1.58
NUP50-206ENST00000422489 LAMTOR3Q9UHA4 124 aa5.21□□□□□ -1.58
NUP50-206ENST00000422489 RPS29P62273 56 aaKnown RBP5.2□□□□□ -1.58
NUP50-206ENST00000422489 SLC25A34Q6PIV7 304 aa5.2□□□□□ -1.58
NUP50-206ENST00000422489 MUSTN1Q8IVN3 82 aa5.2□□□□□ -1.58
NUP50-206ENST00000422489 COPS9Q8WXC6 57 aa5.19□□□□□ -1.58
NUP50-206ENST00000422489 IFITM1P13164 125 aa5.18□□□□□ -1.58
NUP50-206ENST00000422489 SPRR1BP22528 89 aa5.18□□□□□ -1.58
NUP50-206ENST00000422489 ELOF1P60002 83 aaKnown RBP5.18□□□□□ -1.58
NUP50-206ENST00000422489 SEC61BP60468 96 aaKnown RBP5.18□□□□□ -1.58
NUP50-206ENST00000422489 Q1RN00 199 aa5.18□□□□□ -1.58
NUP50-206ENST00000422489 ASB16-AS1Q495Z4 193 aa5.17□□□□□ -1.58
NUP50-206ENST00000422489 PCP2Q8IVA1 136 aa5.17□□□□□ -1.58
NUP50-206ENST00000422489 TEX49A0A1B0GTD5 131 aa5.16□□□□□ -1.58
NUP50-206ENST00000422489 AKR1D1P51857 326 aa5.16□□□□□ -1.58
NUP50-206ENST00000422489 Q6ZVH6 145 aa5.16□□□□□ -1.58
NUP50-206ENST00000422489 LIMD2Q9BT23 127 aa5.16□□□□□ -1.58
NUP50-206ENST00000422489 KRTAP4-7Q9BYR0 210 aa5.16□□□□□ -1.58
NUP50-206ENST00000422489 PRO1933Q9H354 126 aa5.16□□□□□ -1.58
NUP50-206ENST00000422489 TRBV7-6A0A0J9YX20 115 aa5.15□□□□□ -1.59
NUP50-206ENST00000422489 KRTAP19-4Q3LI73 84 aa5.15□□□□□ -1.59
NUP50-206ENST00000422489 MUC17Q685J3 4493 aa5.15□□□□□ -1.59
NUP50-206ENST00000422489 TRAV13-2A0A0B4J235 113 aa5.14□□□□□ -1.59
NUP50-206ENST00000422489 A0A1B0GWB2 263 aa5.14□□□□□ -1.59
NUP50-206ENST00000422489 H7C2G1 150 aa5.14□□□□□ -1.59
NUP50-206ENST00000422489 S100A2P29034 98 aa5.14□□□□□ -1.59
NUP50-206ENST00000422489 SNRPEP62304 92 aaKnown RBP5.14□□□□□ -1.59
NUP50-206ENST00000422489 FAT4Q6V0I7 4981 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms