RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 SCGB1D4Q6XE38 83 aa12.58□□□□□ -0.4
CPNE1-211ENST00000420363 ANAPC11Q9NYG5 84 aa12.58□□□□□ -0.4
CPNE1-211ENST00000420363 CBY1Q9Y3M2 126 aa12.58□□□□□ -0.4
CPNE1-211ENST00000420363 B5MCH6 92 aa12.57□□□□□ -0.4
CPNE1-211ENST00000420363 SPRR4Q96PI1 79 aa12.57□□□□□ -0.4
CPNE1-211ENST00000420363 SPANXDQ9BXN6 97 aa12.57□□□□□ -0.4
CPNE1-211ENST00000420363 TRAV23DV6A0A075B6W5 121 aa12.56□□□□□ -0.4
CPNE1-211ENST00000420363 PPDPFQ9H3Y8 114 aa12.56□□□□□ -0.4
CPNE1-211ENST00000420363 Q6ZRX8 168 aa12.55□□□□□ -0.4
CPNE1-211ENST00000420363 SMCR5Q8TEV8 140 aa12.55□□□□□ -0.4
CPNE1-211ENST00000420363 Q6ZVH6 145 aa12.54□□□□□ -0.4
CPNE1-211ENST00000420363 COPS9Q8WXC6 57 aa12.54□□□□□ -0.4
CPNE1-211ENST00000420363 ZNF73O43830 326 aaPredicted RBP12.52□□□□□ -0.41
CPNE1-211ENST00000420363 PCP2Q8IVA1 136 aa12.52□□□□□ -0.41
CPNE1-211ENST00000420363 LPAP08519 4548 aa12.51□□□□□ -0.41
CPNE1-211ENST00000420363 IFITM1P13164 125 aa12.51□□□□□ -0.41
CPNE1-211ENST00000420363 LINC00518Q8N0U6 118 aa12.51□□□□□ -0.41
CPNE1-211ENST00000420363 C5orf52A6NGY3 159 aa12.5□□□□□ -0.41
CPNE1-211ENST00000420363 JOSD1Q15040 202 aaPredicted RBP12.5□□□□□ -0.41
CPNE1-211ENST00000420363 HSBP1L1C9JCN9 74 aa12.49□□□□□ -0.41
CPNE1-211ENST00000420363 Q9BRP9 147 aa12.49□□□□□ -0.41
CPNE1-211ENST00000420363 CTAG1AP78358 180 aa12.48□□□□□ -0.41
CPNE1-211ENST00000420363 LINC00483Q53H64 154 aa12.48□□□□□ -0.41
CPNE1-211ENST00000420363 LINC00304Q8N9R0 145 aa12.47□□□□□ -0.41
CPNE1-211ENST00000420363 OR13C6PQ8NH95 151 aa12.46□□□□□ -0.41
CPNE1-211ENST00000420363 HINT1P49773 126 aaPredicted RBP12.45□□□□□ -0.42
CPNE1-211ENST00000420363 C3orf22Q8N5N4 141 aa12.45□□□□□ -0.42
CPNE1-211ENST00000420363 ERC2-IT1O76042 136 aa12.43□□□□□ -0.42
CPNE1-211ENST00000420363 TSPAN13O95857 204 aa12.41□□□□□ -0.42
CPNE1-211ENST00000420363 SCGB1D1O95968 90 aa12.4□□□□□ -0.42
CPNE1-211ENST00000420363 PRR4Q16378 134 aa12.4□□□□□ -0.42
CPNE1-211ENST00000420363 MUSTN1Q8IVN3 82 aa12.4□□□□□ -0.42
CPNE1-211ENST00000420363 GAGE2AQ6NT46 116 aa12.39□□□□□ -0.43
CPNE1-211ENST00000420363 SPAG11AQ6PDA7 123 aa12.38□□□□□ -0.43
CPNE1-211ENST00000420363 ELOF1P60002 83 aaKnown RBP12.37□□□□□ -0.43
CPNE1-211ENST00000420363 DHRS4-AS1Q9P1J3 65 aa12.37□□□□□ -0.43
CPNE1-211ENST00000420363 TRBV7-6A0A0J9YX20 115 aa12.36□□□□□ -0.43
CPNE1-211ENST00000420363 C6orf99Q4VX62 202 aa12.35□□□□□ -0.43
CPNE1-211ENST00000420363 TRAV13-2A0A0B4J235 113 aa12.34□□□□□ -0.43
CPNE1-211ENST00000420363 A6NDN8 102 aa12.33□□□□□ -0.44
CPNE1-211ENST00000420363 COX7BP24311 80 aa12.33□□□□□ -0.44
CPNE1-211ENST00000420363 Q8NBF4 154 aa12.32□□□□□ -0.44
CPNE1-211ENST00000420363 COX8AP10176 69 aa12.31□□□□□ -0.44
CPNE1-211ENST00000420363 A0A1B0GWB2 263 aa12.3□□□□□ -0.44
CPNE1-211ENST00000420363 DLEU1O43261 78 aa12.3□□□□□ -0.44
CPNE1-211ENST00000420363 SSBP3-AS1Q7Z2R9 100 aa12.3□□□□□ -0.44
CPNE1-211ENST00000420363 SPRR1BP22528 89 aa12.29□□□□□ -0.44
CPNE1-211ENST00000420363 MOBPQ13875 183 aa12.29□□□□□ -0.44
CPNE1-211ENST00000420363 C4orf48Q5BLP8 95 aa12.29□□□□□ -0.44
CPNE1-211ENST00000420363 ST20-AS1Q8NBB2 130 aa12.29□□□□□ -0.44
CPNE1-211ENST00000420363 MUC2Q02817 5179 aa12.28□□□□□ -0.44
CPNE1-211ENST00000420363 IGLV9-49A0A0B4J1Y8 123 aa12.28□□□□□ -0.44
CPNE1-211ENST00000420363 A4D1N5 150 aa12.26□□□□□ -0.45
CPNE1-211ENST00000420363 SPINK1P00995 79 aa12.26□□□□□ -0.45
CPNE1-211ENST00000420363 SLC25A34Q6PIV7 304 aa12.26□□□□□ -0.45
CPNE1-211ENST00000420363 RPS29P62273 56 aaKnown RBP12.25□□□□□ -0.45
CPNE1-211ENST00000420363 RETNLBQ9BQ08 111 aa12.24□□□□□ -0.45
CPNE1-211ENST00000420363 SPATA45Q537H7 98 aa12.23□□□□□ -0.45
CPNE1-211ENST00000420363 SMIM11BQ8TCY0 68 aa12.23□□□□□ -0.45
CPNE1-211ENST00000420363 HIST1H4GQ99525 98 aa12.23□□□□□ -0.45
CPNE1-211ENST00000420363 VAMP8Q9BV40 100 aa12.23□□□□□ -0.45
CPNE1-211ENST00000420363 PAM16Q9Y3D7 125 aa12.23□□□□□ -0.45
CPNE1-211ENST00000420363 C9orf153Q5TBE3 101 aa12.22□□□□□ -0.45
CPNE1-211ENST00000420363 A0A0U1RQV1 116 aa12.21□□□□□ -0.45
CPNE1-211ENST00000420363 NHP2Q9NX24 153 aaKnown RBP12.21□□□□□ -0.45
CPNE1-211ENST00000420363 HIGD1BQ9P298 99 aa12.2□□□□□ -0.46
CPNE1-211ENST00000420363 LAMTOR3Q9UHA4 124 aa12.19□□□□□ -0.46
CPNE1-211ENST00000420363 TPRXLQ17RH7 258 aa12.18□□□□□ -0.46
CPNE1-211ENST00000420363 FP248Q71RG6 208 aaPredicted RBP12.18□□□□□ -0.46
CPNE1-211ENST00000420363 C14orf144Q96I85 54 aa12.18□□□□□ -0.46
CPNE1-211ENST00000420363 IGLV5-48A0A075B6I7 105 aa12.17□□□□□ -0.46
CPNE1-211ENST00000420363 TEX49A0A1B0GTD5 131 aa12.17□□□□□ -0.46
CPNE1-211ENST00000420363 VAMP3Q15836 100 aa12.16□□□□□ -0.46
CPNE1-211ENST00000420363 IGLV7-46A0A075B6I9 117 aa12.15□□□□□ -0.46
CPNE1-211ENST00000420363 TAL2Q16559 108 aa12.15□□□□□ -0.46
CPNE1-211ENST00000420363 LINC01547P58512 204 aaPredicted RBP12.13□□□□□ -0.47
CPNE1-211ENST00000420363 C2orf91Q6ZV80 131 aa12.13□□□□□ -0.47
CPNE1-211ENST00000420363 SLC25A20O43772 301 aa12.12□□□□□ -0.47
CPNE1-211ENST00000420363 PYY3Q5JQD4 70 aa12.11□□□□□ -0.47
CPNE1-211ENST00000420363 Q8N377 158 aa12.11□□□□□ -0.47
CPNE1-211ENST00000420363 DEFB105AQ8NG35 78 aa12.11□□□□□ -0.47
CPNE1-211ENST00000420363 C12orf57Q99622 126 aa12.11□□□□□ -0.47
CPNE1-211ENST00000420363 LINC00575Q6W349 94 aa12.1□□□□□ -0.47
CPNE1-211ENST00000420363 Q1RN00 199 aa12.09□□□□□ -0.47
CPNE1-211ENST00000420363 SMIM29Q86T20 159 aa12.09□□□□□ -0.47
CPNE1-211ENST00000420363 BVES-AS1Q5T3Y7 98 aa12.08□□□□□ -0.48
CPNE1-211ENST00000420363 TMA7Q9Y2S6 64 aaKnown RBP12.08□□□□□ -0.48
CPNE1-211ENST00000420363 A0A0B4J2C4 111 aa12.07□□□□□ -0.48
CPNE1-211ENST00000420363 CFC1BP0CG36 223 aa12.06□□□□□ -0.48
CPNE1-211ENST00000420363 CFC1P0CG37 223 aa12.06□□□□□ -0.48
CPNE1-211ENST00000420363 CD164Q04900 197 aa12.05□□□□□ -0.48
CPNE1-211ENST00000420363 LIMD2Q9BT23 127 aa12.05□□□□□ -0.48
CPNE1-211ENST00000420363 PRO1933Q9H354 126 aa12.05□□□□□ -0.48
CPNE1-211ENST00000420363 hADV29S1A0JD25 119 aa12.04□□□□□ -0.48
CPNE1-211ENST00000420363 CEND1Q8N111 149 aa12.04□□□□□ -0.48
CPNE1-211ENST00000420363 RAB37Q96AX2 223 aa12.04□□□□□ -0.48
CPNE1-211ENST00000420363 CDIP1Q9H305 208 aa12.04□□□□□ -0.48
CPNE1-211ENST00000420363 TMEM238LA0A1B0GVL6 79 aa12.03□□□□□ -0.48
CPNE1-211ENST00000420363 A6NJY4 79 aa12.03□□□□□ -0.48
CPNE1-211ENST00000420363 Q6ZQY7 126 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms