RNA–Protein interactions for RNA: ENST00000415380.6

SCARB1-203, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2 BASIC

Gene SCARB1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-203ENST00000415380 Q8N9L7 120 aa11.77□□□□□ -0.53
SCARB1-203ENST00000415380 KRTAP10-11P60412 298 aa11.76□□□□□ -0.53
SCARB1-203ENST00000415380 LINC01556Q5JQF7 62 aa11.76□□□□□ -0.53
SCARB1-203ENST00000415380 KCNQ1DNQ9H478 68 aa11.76□□□□□ -0.53
SCARB1-203ENST00000415380 NKAPP1Q8N9T2 125 aa11.76□□□□□ -0.53
SCARB1-203ENST00000415380 F8WDY8 70 aa11.75□□□□□ -0.53
SCARB1-203ENST00000415380 PKD1L1Q8TDX9 2849 aa11.75□□□□□ -0.53
SCARB1-203ENST00000415380 F8WEM9 126 aa11.75□□□□□ -0.53
SCARB1-203ENST00000415380 DEFB105AQ8NG35 78 aa11.75□□□□□ -0.53
SCARB1-203ENST00000415380 C7orf33Q8WU49 177 aa11.75□□□□□ -0.53
SCARB1-203ENST00000415380 BPY2O14599 106 aa11.74□□□□□ -0.53
SCARB1-203ENST00000415380 NREPQ16612 68 aa11.74□□□□□ -0.53
SCARB1-203ENST00000415380 SERP1Q9Y6X1 66 aa11.74□□□□□ -0.53
SCARB1-203ENST00000415380 EPM2AB3EWF7 344 aa11.73□□□□□ -0.53
SCARB1-203ENST00000415380 IGKV4-1P06312 121 aa11.73□□□□□ -0.53
SCARB1-203ENST00000415380 Q8N377 158 aa11.73□□□□□ -0.53
SCARB1-203ENST00000415380 C3orf84H3BNL1 204 aa11.72□□□□□ -0.53
SCARB1-203ENST00000415380 DEFB131BA0A096LNP1 70 aa11.71□□□□□ -0.54
SCARB1-203ENST00000415380 HRCT1Q6UXD1 115 aa11.7□□□□□ -0.54
SCARB1-203ENST00000415380 IGLV5-48A0A075B6I7 105 aa11.68□□□□□ -0.54
SCARB1-203ENST00000415380 NDUFC1O43677 76 aa11.68□□□□□ -0.54
SCARB1-203ENST00000415380 RPL37AP8A6NKH3 93 aa11.67□□□□□ -0.54
SCARB1-203ENST00000415380 TMEM254Q8TBM7 123 aa11.66□□□□□ -0.54
SCARB1-203ENST00000415380 C11orf45Q8TAV5 145 aa11.66□□□□□ -0.54
SCARB1-203ENST00000415380 TLX1NBP0CAT3 122 aa11.66□□□□□ -0.54
SCARB1-203ENST00000415380 DNAH10OSP0CZ25 163 aa11.66□□□□□ -0.54
SCARB1-203ENST00000415380 Q6ZRX8 168 aa11.66□□□□□ -0.54
SCARB1-203ENST00000415380 TENM3Q9P273 2699 aa11.65□□□□□ -0.54
SCARB1-203ENST00000415380 FAM168BA1KXE4 195 aa11.65□□□□□ -0.54
SCARB1-203ENST00000415380 ERC2-IT1O76042 136 aa11.65□□□□□ -0.54
SCARB1-203ENST00000415380 Q9BRP9 147 aa11.65□□□□□ -0.54
SCARB1-203ENST00000415380 DHRS4-AS1Q9P1J3 65 aa11.65□□□□□ -0.54
SCARB1-203ENST00000415380 ANK2Q01484 3957 aa11.65□□□□□ -0.54
SCARB1-203ENST00000415380 PLA2G2DQ9UNK4 145 aa11.65□□□□□ -0.55
SCARB1-203ENST00000415380 KRTAP4-16G5E9R7 235 aaPredicted RBP11.64□□□□□ -0.55
SCARB1-203ENST00000415380 OCR1Q9BZK8 76 aa11.64□□□□□ -0.55
SCARB1-203ENST00000415380 IGLV1-50A0A075B6I6 118 aa11.62□□□□□ -0.55
SCARB1-203ENST00000415380 PRYO14603 147 aa11.62□□□□□ -0.55
SCARB1-203ENST00000415380 A0A1W2PNM2 257 aa11.61□□□□□ -0.55
SCARB1-203ENST00000415380 CASC10Q5T4H9 136 aa11.61□□□□□ -0.55
SCARB1-203ENST00000415380 FUSP35637 526 aaKnown RBP eCLIP11.61□□□□□ -0.553e-6■■□□□ 13.4
SCARB1-203ENST00000415380 ST20-AS1Q8NBB2 130 aa11.61□□□□□ -0.55
SCARB1-203ENST00000415380 IGLV5-37A0A075B6J1 123 aa11.6□□□□□ -0.55
SCARB1-203ENST00000415380 ETDCA0A1B0GVM5 59 aa11.6□□□□□ -0.55
SCARB1-203ENST00000415380 SPRR1AP35321 89 aa11.6□□□□□ -0.55
SCARB1-203ENST00000415380 KRTAP7-1Q8IUC3 87 aa11.6□□□□□ -0.55
SCARB1-203ENST00000415380 MRAPQ8TCY5 172 aa11.6□□□□□ -0.55
SCARB1-203ENST00000415380 TNP2Q05952 138 aa11.59□□□□□ -0.55
SCARB1-203ENST00000415380 C1orf137Q5JT78 98 aa11.59□□□□□ -0.55
SCARB1-203ENST00000415380 A0A0U1RQV1 116 aa11.58□□□□□ -0.56
SCARB1-203ENST00000415380 ATP5EP56381 51 aaPredicted RBP11.58□□□□□ -0.56
SCARB1-203ENST00000415380 A0A1B0GW54 56 aa11.57□□□□□ -0.56
SCARB1-203ENST00000415380 LINC00588Q9Y4M8 146 aa11.57□□□□□ -0.56
SCARB1-203ENST00000415380 SMIM26A0A096LP01 95 aa11.56□□□□□ -0.56
SCARB1-203ENST00000415380 FP248Q71RG6 208 aaPredicted RBP11.56□□□□□ -0.56
SCARB1-203ENST00000415380 Q8NBF4 154 aa11.55□□□□□ -0.56
SCARB1-203ENST00000415380 SMIM29Q86T20 159 aa11.54□□□□□ -0.56
SCARB1-203ENST00000415380 MRPL55Q7Z7F7 128 aaKnown RBP11.53□□□□□ -0.56
SCARB1-203ENST00000415380 HIGD2AQ9BW72 106 aa11.53□□□□□ -0.56
SCARB1-203ENST00000415380 CMYA5Q8N3K9 4069 aa11.53□□□□□ -0.56
SCARB1-203ENST00000415380 DNAH1Q9P2D7 4330 aa11.52□□□□□ -0.56
SCARB1-203ENST00000415380 SPRR4Q96PI1 79 aa11.51□□□□□ -0.57
SCARB1-203ENST00000415380 FAM30AQ9NZY2 134 aa11.51□□□□□ -0.57
SCARB1-203ENST00000415380 FLNBO75369 2602 aaKnown RBP11.51□□□□□ -0.57
SCARB1-203ENST00000415380 UBE2BP63146 152 aa11.51□□□□□ -0.57
SCARB1-203ENST00000415380 LINC00474Q9P2X8 69 aa11.51□□□□□ -0.57
SCARB1-203ENST00000415380 DSCR10P59022 87 aa11.48□□□□□ -0.57
SCARB1-203ENST00000415380 KRTAP24-1Q3LI83 254 aa11.46□□□□□ -0.57
SCARB1-203ENST00000415380 REG3GQ6UW15 175 aa11.46□□□□□ -0.57
SCARB1-203ENST00000415380 DNAH3Q8TD57 4116 aa11.45□□□□□ -0.58
SCARB1-203ENST00000415380 K7EQZ3 153 aa11.44□□□□□ -0.58
SCARB1-203ENST00000415380 FAM229BQ4G0N7 80 aa11.44□□□□□ -0.58
SCARB1-203ENST00000415380 LINC00336Q6ZUF6 198 aa11.44□□□□□ -0.58
SCARB1-203ENST00000415380 LCE6AA0A183 80 aa11.44□□□□□ -0.58
SCARB1-203ENST00000415380 LINC00476Q8WZB0 136 aa11.43□□□□□ -0.58
SCARB1-203ENST00000415380 A0A0G2JQZ4 141 aa11.42□□□□□ -0.58
SCARB1-203ENST00000415380 A0A1W2PNN7 141 aa11.42□□□□□ -0.58
SCARB1-203ENST00000415380 STAB1Q9NY15 2570 aa11.39□□□□□ -0.59
SCARB1-203ENST00000415380 PRB2P02812 416 aaPredicted RBP11.39□□□□□ -0.59
SCARB1-203ENST00000415380 FBN1P35555 2871 aaKnown RBP11.38□□□□□ -0.59
SCARB1-203ENST00000415380 IGFL1Q6UW32 110 aa11.38□□□□□ -0.59
SCARB1-203ENST00000415380 MAST4O15021 2626 aa11.36□□□□□ -0.59
SCARB1-203ENST00000415380 PRLHP81277 87 aa11.36□□□□□ -0.59
SCARB1-203ENST00000415380 A0A096LNI7 61 aa11.36□□□□□ -0.59
SCARB1-203ENST00000415380 PSCAO43653 123 aa11.36□□□□□ -0.59
SCARB1-203ENST00000415380 HCG22E2RYF7 251 aa11.35□□□□□ -0.59
SCARB1-203ENST00000415380 ZCCHC13Q8WW36 166 aaKnown RBP11.35□□□□□ -0.59
SCARB1-203ENST00000415380 MPLKIPQ8TAP9 179 aa11.35□□□□□ -0.59
SCARB1-203ENST00000415380 PRO0628Q9UI54 55 aa11.35□□□□□ -0.59
SCARB1-203ENST00000415380 BAHCC1Q9P281 2608 aa11.34□□□□□ -0.59
SCARB1-203ENST00000415380 IGKV2-24A0A0C4DH68 120 aa11.34□□□□□ -0.59
SCARB1-203ENST00000415380 DEFB116Q30KQ4 102 aa11.34□□□□□ -0.59
SCARB1-203ENST00000415380 NOTCH1P46531 2555 aa11.33□□□□□ -0.6
SCARB1-203ENST00000415380 C16orf90A8MZG2 172 aa11.32□□□□□ -0.6
SCARB1-203ENST00000415380 F8P00451 2351 aa11.32□□□□□ -0.6
SCARB1-203ENST00000415380 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.31□□□□□ -0.6
SCARB1-203ENST00000415380 HUWE1Q7Z6Z7 4374 aaKnown RBP11.31□□□□□ -0.6
SCARB1-203ENST00000415380 IGLV8-61A0A075B6I0 122 aa11.3□□□□□ -0.6
SCARB1-203ENST00000415380 KRTAP1-5Q9BYS1 174 aa11.3□□□□□ -0.6
SCARB1-203ENST00000415380 A0A087WSZ3 146 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms