RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 NDUFA5Q16718 116 aa10.6□□□□□ -0.71
UBXN4-202ENST00000415164 PCOTHQ58A44 107 aa10.6□□□□□ -0.71
UBXN4-202ENST00000415164 LCE2CQ5TA81 110 aa10.59□□□□□ -0.71
UBXN4-202ENST00000415164 LEPROTL1O95214 131 aa10.58□□□□□ -0.72
UBXN4-202ENST00000415164 NDUFC2O95298 119 aa10.58□□□□□ -0.72
UBXN4-202ENST00000415164 SVBPQ8N300 66 aa10.58□□□□□ -0.72
UBXN4-202ENST00000415164 PMCHL2Q9BQD1 86 aa10.58□□□□□ -0.72
UBXN4-202ENST00000415164 PLNP26678 52 aa10.57□□□□□ -0.72
UBXN4-202ENST00000415164 HINT1P49773 126 aaPredicted RBP10.57□□□□□ -0.72
UBXN4-202ENST00000415164 LIMD2Q9BT23 127 aa10.57□□□□□ -0.72
UBXN4-202ENST00000415164 NMUP48645 174 aa10.56□□□□□ -0.72
UBXN4-202ENST00000415164 DPM2O94777 84 aa10.55□□□□□ -0.72
UBXN4-202ENST00000415164 FABP4P15090 132 aa10.54□□□□□ -0.72
UBXN4-202ENST00000415164 MT1HP80294 61 aa10.54□□□□□ -0.72
UBXN4-202ENST00000415164 SOSTDC1Q6X4U4 206 aa10.54□□□□□ -0.72
UBXN4-202ENST00000415164 OR13C6PQ8NH95 151 aa10.53□□□□□ -0.72
UBXN4-202ENST00000415164 EIF4EBP3O60516 100 aaPredicted RBP10.52□□□□□ -0.73
UBXN4-202ENST00000415164 IGKCP01834 107 aa10.52□□□□□ -0.73
UBXN4-202ENST00000415164 KRTAP19-2Q3LHN2 52 aa10.51□□□□□ -0.73
UBXN4-202ENST00000415164 ADAMTSL4-AS1Q5T5F5 129 aa10.51□□□□□ -0.73
UBXN4-202ENST00000415164 SLC25A34Q6PIV7 304 aa10.51□□□□□ -0.73
UBXN4-202ENST00000415164 YPEL4Q96NS1 127 aa10.51□□□□□ -0.73
UBXN4-202ENST00000415164 SERF1AO75920 110 aa10.5□□□□□ -0.73
UBXN4-202ENST00000415164 CFC1BP0CG36 223 aa10.5□□□□□ -0.73
UBXN4-202ENST00000415164 LAMTOR3Q9UHA4 124 aa10.5□□□□□ -0.73
UBXN4-202ENST00000415164 HSPB8Q9UJY1 196 aa10.5□□□□□ -0.73
UBXN4-202ENST00000415164 CBY1Q9Y3M2 126 aa10.5□□□□□ -0.73
UBXN4-202ENST00000415164 A0A0J9YXY3 114 aa10.49□□□□□ -0.73
UBXN4-202ENST00000415164 C5orf52A6NGY3 159 aa10.48□□□□□ -0.73
UBXN4-202ENST00000415164 TRGC2P03986 189 aa10.48□□□□□ -0.73
UBXN4-202ENST00000415164 H7C2G1 150 aa10.47□□□□□ -0.73
UBXN4-202ENST00000415164 DEFB105AQ8NG35 78 aa10.47□□□□□ -0.73
UBXN4-202ENST00000415164 DHRS4-AS1Q9P1J3 65 aa10.47□□□□□ -0.73
UBXN4-202ENST00000415164 LINC00310P59036 64 aa10.46□□□□□ -0.73
UBXN4-202ENST00000415164 Q1RN00 199 aa10.46□□□□□ -0.73
UBXN4-202ENST00000415164 M0R2T5 61 aa10.45□□□□□ -0.74
UBXN4-202ENST00000415164 SPRR1BP22528 89 aa10.45□□□□□ -0.74
UBXN4-202ENST00000415164 TAL2Q16559 108 aa10.44□□□□□ -0.74
UBXN4-202ENST00000415164 SPANXCQ9NY87 97 aa10.43□□□□□ -0.74
UBXN4-202ENST00000415164 COX7BP24311 80 aa10.42□□□□□ -0.74
UBXN4-202ENST00000415164 LINC00308Q8TCZ7 52 aa10.42□□□□□ -0.74
UBXN4-202ENST00000415164 E9PLD3 99 aa10.41□□□□□ -0.74
UBXN4-202ENST00000415164 PRO1933Q9H354 126 aa10.41□□□□□ -0.74
UBXN4-202ENST00000415164 KRTAP10-6P60371 365 aaPredicted RBP10.4□□□□□ -0.74
UBXN4-202ENST00000415164 COX6B2Q6YFQ2 88 aa10.4□□□□□ -0.74
UBXN4-202ENST00000415164 C6orf99Q4VX62 202 aa10.38□□□□□ -0.75
UBXN4-202ENST00000415164 SPANXDQ9BXN6 97 aa10.38□□□□□ -0.75
UBXN4-202ENST00000415164 LORP23490 312 aaPredicted RBP10.37□□□□□ -0.75
UBXN4-202ENST00000415164 ELOF1P60002 83 aaKnown RBP10.37□□□□□ -0.75
UBXN4-202ENST00000415164 CD164Q04900 197 aa10.36□□□□□ -0.75
UBXN4-202ENST00000415164 LITAFQ99732 161 aa10.36□□□□□ -0.75
UBXN4-202ENST00000415164 TEX49A0A1B0GTD5 131 aa10.35□□□□□ -0.75
UBXN4-202ENST00000415164 A0A0G2JQZ4 141 aa10.34□□□□□ -0.75
UBXN4-202ENST00000415164 ZNF815PA8K554 130 aa10.33□□□□□ -0.76
UBXN4-202ENST00000415164 AKR1D1P51857 326 aa10.33□□□□□ -0.76
UBXN4-202ENST00000415164 RPL37P61927 97 aaKnown RBP10.32□□□□□ -0.76
UBXN4-202ENST00000415164 C1orf195Q5TG92 126 aa10.32□□□□□ -0.76
UBXN4-202ENST00000415164 TIMM17BO60830 172 aa10.31□□□□□ -0.76
UBXN4-202ENST00000415164 LINC00518Q8N0U6 118 aa10.31□□□□□ -0.76
UBXN4-202ENST00000415164 TTTY13Q9BZ97 58 aa10.3□□□□□ -0.76
UBXN4-202ENST00000415164 FLGP20930 4061 aaPredicted RBP10.28□□□□□ -0.76
UBXN4-202ENST00000415164 SYS1-DBNDD2H3BUS1 97 aa10.28□□□□□ -0.76
UBXN4-202ENST00000415164 SMIM29Q86T20 159 aa10.27□□□□□ -0.77
UBXN4-202ENST00000415164 Q5XG85 94 aa10.26□□□□□ -0.77
UBXN4-202ENST00000415164 A6NDN8 102 aa10.25□□□□□ -0.77
UBXN4-202ENST00000415164 A0A1B0GWB2 263 aa10.24□□□□□ -0.77
UBXN4-202ENST00000415164 SCGB1D4Q6XE38 83 aa10.24□□□□□ -0.77
UBXN4-202ENST00000415164 Q6Q795 121 aa10.23□□□□□ -0.77
UBXN4-202ENST00000415164 TRBV7-6A0A0J9YX20 115 aa10.22□□□□□ -0.77
UBXN4-202ENST00000415164 TCL1BO95988 128 aa10.22□□□□□ -0.77
UBXN4-202ENST00000415164 LINC01545Q5VT33 79 aa10.21□□□□□ -0.77
UBXN4-202ENST00000415164 IGLV5-48A0A075B6I7 105 aa10.2□□□□□ -0.78
UBXN4-202ENST00000415164 COLCA2A8K830 154 aa10.19□□□□□ -0.78
UBXN4-202ENST00000415164 PET117Q6UWS5 81 aa10.19□□□□□ -0.78
UBXN4-202ENST00000415164 PCP2Q8IVA1 136 aa10.18□□□□□ -0.78
UBXN4-202ENST00000415164 F8WEM9 126 aa10.17□□□□□ -0.78
UBXN4-202ENST00000415164 COPS9Q8WXC6 57 aa10.17□□□□□ -0.78
UBXN4-202ENST00000415164 NHP2Q9NX24 153 aaKnown RBP10.16□□□□□ -0.78
UBXN4-202ENST00000415164 A4D1N5 150 aa10.14□□□□□ -0.79
UBXN4-202ENST00000415164 MUSTN1Q8IVN3 82 aa10.14□□□□□ -0.79
UBXN4-202ENST00000415164 IFITM1P13164 125 aa10.13□□□□□ -0.79
UBXN4-202ENST00000415164 KRTDAPP60985 99 aa10.13□□□□□ -0.79
UBXN4-202ENST00000415164 HIST1H2BKO60814 126 aa10.12□□□□□ -0.79
UBXN4-202ENST00000415164 HIST1H2BJP06899 126 aa10.12□□□□□ -0.79
UBXN4-202ENST00000415164 C3orf79P0CE67 100 aa10.12□□□□□ -0.79
UBXN4-202ENST00000415164 HIST1H2BOP23527 126 aa10.12□□□□□ -0.79
UBXN4-202ENST00000415164 HIST1H2BBP33778 126 aa10.12□□□□□ -0.79
UBXN4-202ENST00000415164 HIST1H2BDP58876 126 aa10.12□□□□□ -0.79
UBXN4-202ENST00000415164 HIST1H2BCP62807 126 aa10.12□□□□□ -0.79
UBXN4-202ENST00000415164 HIST2H2BEQ16778 126 aa10.12□□□□□ -0.79
UBXN4-202ENST00000415164 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.12□□□□□ -0.79
UBXN4-202ENST00000415164 HIST1H2BHQ93079 126 aa10.12□□□□□ -0.79
UBXN4-202ENST00000415164 HIST1H2BNQ99877 126 aa10.12□□□□□ -0.79
UBXN4-202ENST00000415164 HIST1H2BMQ99879 126 aa10.12□□□□□ -0.79
UBXN4-202ENST00000415164 ATP11AUNQ6ZP68 121 aa10.11□□□□□ -0.79
UBXN4-202ENST00000415164 SMIM11BQ8TCY0 68 aa10.11□□□□□ -0.79
UBXN4-202ENST00000415164 SLC7A5P1Q8MH63 180 aa10.1□□□□□ -0.79
UBXN4-202ENST00000415164 OBSCN-AS1Q96MR7 158 aa10.1□□□□□ -0.79
UBXN4-202ENST00000415164 TRAV13-2A0A0B4J235 113 aa10.09□□□□□ -0.79
UBXN4-202ENST00000415164 ANKRD39Q53RE8 183 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms