RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 M0R143 59 aa5.68□□□□□ -1.5
RFFL-203ENST00000413582 SMIM13P0DJ93 91 aa5.68□□□□□ -1.5
RFFL-203ENST00000413582 ARL17AQ8IVW1 177 aa5.68□□□□□ -1.5
RFFL-203ENST00000413582 ADAMTSL4-AS1Q5T5F5 129 aa5.67□□□□□ -1.5
RFFL-203ENST00000413582 FAM19A5Q7Z5A7 132 aaPredicted RBP5.67□□□□□ -1.5
RFFL-203ENST00000413582 CEND1Q8N111 149 aa5.67□□□□□ -1.5
RFFL-203ENST00000413582 PFN2P35080 140 aa5.66□□□□□ -1.5
RFFL-203ENST00000413582 RPL24P83731 157 aaKnown RBP5.66□□□□□ -1.5
RFFL-203ENST00000413582 KRTAP7-1Q8IUC3 87 aa5.66□□□□□ -1.5
RFFL-203ENST00000413582 MIR7-3HGQ8N6C7 128 aa5.66□□□□□ -1.5
RFFL-203ENST00000413582 LINC00308Q8TCZ7 52 aa5.66□□□□□ -1.5
RFFL-203ENST00000413582 TSPAN13O95857 204 aa5.65□□□□□ -1.5
RFFL-203ENST00000413582 MUSTN1Q8IVN3 82 aa5.65□□□□□ -1.5
RFFL-203ENST00000413582 M0QXV9 152 aa5.64□□□□□ -1.51
RFFL-203ENST00000413582 NDUFC2O95298 119 aa5.64□□□□□ -1.51
RFFL-203ENST00000413582 BVES-AS1Q5T3Y7 98 aa5.64□□□□□ -1.51
RFFL-203ENST00000413582 SND1-IT1Q9HBX3 110 aa5.64□□□□□ -1.51
RFFL-203ENST00000413582 A0A0U1RRA0 63 aa5.63□□□□□ -1.51
RFFL-203ENST00000413582 UBE2BP63146 152 aa5.63□□□□□ -1.51
RFFL-203ENST00000413582 MUC17Q685J3 4493 aa5.62□□□□□ -1.51
RFFL-203ENST00000413582 A6NDN8 102 aa5.62□□□□□ -1.51
RFFL-203ENST00000413582 HINT1P49773 126 aaPredicted RBP5.62□□□□□ -1.51
RFFL-203ENST00000413582 SOSTDC1Q6X4U4 206 aa5.62□□□□□ -1.51
RFFL-203ENST00000413582 DAND5Q8N907 189 aa5.62□□□□□ -1.51
RFFL-203ENST00000413582 A0A087X002 238 aa5.61□□□□□ -1.51
RFFL-203ENST00000413582 A0A0B4J2C4 111 aa5.61□□□□□ -1.51
RFFL-203ENST00000413582 A0A1B0GWB2 263 aa5.61□□□□□ -1.51
RFFL-203ENST00000413582 B5MCH6 92 aa5.61□□□□□ -1.51
RFFL-203ENST00000413582 FXYD2P54710 66 aa5.61□□□□□ -1.51
RFFL-203ENST00000413582 GAGE2EQ4V326 116 aa5.61□□□□□ -1.51
RFFL-203ENST00000413582 C9orf129Q5T035 196 aaKnown RBP5.61□□□□□ -1.51
RFFL-203ENST00000413582 GAGE2DQ9UEU5 116 aa5.61□□□□□ -1.51
RFFL-203ENST00000413582 FSIP2Q5CZC0 6907 aa5.6□□□□□ -1.51
RFFL-203ENST00000413582 TRBV10-2A0A0K0K1G8 114 aa5.6□□□□□ -1.51
RFFL-203ENST00000413582 ZNF861PO60384 105 aa5.6□□□□□ -1.51
RFFL-203ENST00000413582 SNHG12Q9BXW3 62 aa5.6□□□□□ -1.51
RFFL-203ENST00000413582 IGLV5-37A0A075B6J1 123 aa5.59□□□□□ -1.51
RFFL-203ENST00000413582 TRAV13-2A0A0B4J235 113 aa5.59□□□□□ -1.51
RFFL-203ENST00000413582 CFC1BP0CG36 223 aa5.59□□□□□ -1.51
RFFL-203ENST00000413582 CFC1P0CG37 223 aa5.59□□□□□ -1.51
RFFL-203ENST00000413582 COL5A1-AS1Q5SY13 56 aa5.59□□□□□ -1.51
RFFL-203ENST00000413582 NPC2P61916 151 aa5.58□□□□□ -1.52
RFFL-203ENST00000413582 TPRXLQ17RH7 258 aa5.58□□□□□ -1.52
RFFL-203ENST00000413582 RETNLBQ9BQ08 111 aa5.58□□□□□ -1.52
RFFL-203ENST00000413582 XAGE1AQ9HD64 81 aa5.58□□□□□ -1.52
RFFL-203ENST00000413582 NHP2Q9NX24 153 aaKnown RBP5.58□□□□□ -1.52
RFFL-203ENST00000413582 CRCT1Q9UGL9 99 aa5.58□□□□□ -1.52
RFFL-203ENST00000413582 PRO1854Q9UHT4 67 aa5.58□□□□□ -1.52
RFFL-203ENST00000413582 M0R378 163 aa5.57□□□□□ -1.52
RFFL-203ENST00000413582 VPREB1P12018 145 aa5.57□□□□□ -1.52
RFFL-203ENST00000413582 TYMSOSQ8TAI1 123 aa5.57□□□□□ -1.52
RFFL-203ENST00000413582 RAB37Q96AX2 223 aa5.57□□□□□ -1.52
RFFL-203ENST00000413582 IGKV2-28A0A075B6P5 120 aa5.56□□□□□ -1.52
RFFL-203ENST00000413582 IGKV2D-28P01615 120 aa5.56□□□□□ -1.52
RFFL-203ENST00000413582 BATFQ16520 125 aa5.56□□□□□ -1.52
RFFL-203ENST00000413582 TMEM126AQ9H061 195 aa5.56□□□□□ -1.52
RFFL-203ENST00000413582 CRYGAP11844 174 aa5.55□□□□□ -1.52
RFFL-203ENST00000413582 NKAPP1Q8N9T2 125 aa5.55□□□□□ -1.52
RFFL-203ENST00000413582 KRTAP13-2Q52LG2 175 aa5.54□□□□□ -1.52
RFFL-203ENST00000413582 LINC00337Q8N6G1 96 aa5.54□□□□□ -1.52
RFFL-203ENST00000413582 IGLV7-46A0A075B6I9 117 aa5.53□□□□□ -1.52
RFFL-203ENST00000413582 IGLV6-57P01721 117 aa5.53□□□□□ -1.52
RFFL-203ENST00000413582 S100A7L2Q5SY68 101 aa5.53□□□□□ -1.52
RFFL-203ENST00000413582 Q8NDZ9 215 aa5.53□□□□□ -1.52
RFFL-203ENST00000413582 ANAPC11Q9NYG5 84 aa5.53□□□□□ -1.52
RFFL-203ENST00000413582 C22orf24Q9Y442 160 aa5.53□□□□□ -1.52
RFFL-203ENST00000413582 C9orf118A6NHY6 69 aa5.52□□□□□ -1.53
RFFL-203ENST00000413582 TAX1BP3O14907 124 aa5.52□□□□□ -1.53
RFFL-203ENST00000413582 RPL28P46779 137 aaKnown RBP5.52□□□□□ -1.53
RFFL-203ENST00000413582 MRPL55Q7Z7F7 128 aaKnown RBP5.52□□□□□ -1.53
RFFL-203ENST00000413582 LINC00304Q8N9R0 145 aa5.52□□□□□ -1.53
RFFL-203ENST00000413582 OR13C6PQ8NH95 151 aa5.52□□□□□ -1.53
RFFL-203ENST00000413582 K7ERJ3 54 aa5.51□□□□□ -1.53
RFFL-203ENST00000413582 NCR3O14931 201 aa5.51□□□□□ -1.53
RFFL-203ENST00000413582 BCE1O60756 84 aa5.51□□□□□ -1.53
RFFL-203ENST00000413582 COX6CP09669 75 aa5.5□□□□□ -1.53
RFFL-203ENST00000413582 LYRM7Q5U5X0 104 aa5.5□□□□□ -1.53
RFFL-203ENST00000413582 LINC00167Q96N53 147 aa5.5□□□□□ -1.53
RFFL-203ENST00000413582 KCNQ1DNQ9H478 68 aa5.5□□□□□ -1.53
RFFL-203ENST00000413582 TRBV7-6A0A0J9YX20 115 aa5.49□□□□□ -1.53
RFFL-203ENST00000413582 TRBV10-3A0A0K0K1G6 114 aa5.49□□□□□ -1.53
RFFL-203ENST00000413582 H0YGX0 51 aa5.49□□□□□ -1.53
RFFL-203ENST00000413582 PRYO14603 147 aa5.49□□□□□ -1.53
RFFL-203ENST00000413582 LINC01547P58512 204 aaPredicted RBP5.49□□□□□ -1.53
RFFL-203ENST00000413582 VAMP3Q15836 100 aa5.49□□□□□ -1.53
RFFL-203ENST00000413582 Q1RN00 199 aa5.49□□□□□ -1.53
RFFL-203ENST00000413582 KRTAP13-1Q8IUC0 172 aa5.49□□□□□ -1.53
RFFL-203ENST00000413582 SMIM11BQ8TCY0 68 aa5.49□□□□□ -1.53
RFFL-203ENST00000413582 TRAV23DV6A0A075B6W5 121 aa5.48□□□□□ -1.53
RFFL-203ENST00000413582 FAM229BQ4G0N7 80 aa5.48□□□□□ -1.53
RFFL-203ENST00000413582 GAGE10A6NGK3 116 aa5.47□□□□□ -1.53
RFFL-203ENST00000413582 RPL37AP8A6NKH3 93 aa5.47□□□□□ -1.53
RFFL-203ENST00000413582 H3BUT2 72 aa5.47□□□□□ -1.53
RFFL-203ENST00000413582 H7C2G1 150 aa5.47□□□□□ -1.53
RFFL-203ENST00000413582 SPRR1AP35321 89 aa5.47□□□□□ -1.53
RFFL-203ENST00000413582 PSMB2P49721 201 aa5.47□□□□□ -1.53
RFFL-203ENST00000413582 KRTAP4-1Q9BYQ7 146 aa5.47□□□□□ -1.53
RFFL-203ENST00000413582 TRBV20-1A0A075B6N2 111 aa5.46□□□□□ -1.54
RFFL-203ENST00000413582 A0A1B0GX51 115 aa5.46□□□□□ -1.54
RFFL-203ENST00000413582 A0A1W2PPM0 123 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms