RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 MAP1LC3CQ9BXW4 147 aa1.21□□□□□ -2.22
RNU4-53P-201ENST00000410828 TRAV23DV6A0A075B6W5 121 aa1.2□□□□□ -2.22
RNU4-53P-201ENST00000410828 LOC107984156A0A0G2JMH3 177 aa1.2□□□□□ -2.22
RNU4-53P-201ENST00000410828 LINC01546A6NGU7 62 aa1.2□□□□□ -2.22
RNU4-53P-201ENST00000410828 C11orf86A6NJI1 115 aa1.2□□□□□ -2.22
RNU4-53P-201ENST00000410828 ZNF73O43830 326 aaPredicted RBP1.2□□□□□ -2.22
RNU4-53P-201ENST00000410828 TCL1BO95988 128 aa1.2□□□□□ -2.22
RNU4-53P-201ENST00000410828 AKR1D1P51857 326 aa1.2□□□□□ -2.22
RNU4-53P-201ENST00000410828 TAL2Q16559 108 aa1.2□□□□□ -2.22
RNU4-53P-201ENST00000410828 KRTAP20-1Q3LI63 56 aa1.2□□□□□ -2.22
RNU4-53P-201ENST00000410828 C6orf99Q4VX62 202 aa1.2□□□□□ -2.22
RNU4-53P-201ENST00000410828 Q75L30 129 aa1.2□□□□□ -2.22
RNU4-53P-201ENST00000410828 ARL17AQ8IVW1 177 aa1.2□□□□□ -2.22
RNU4-53P-201ENST00000410828 ANAPC16Q96DE5 110 aa1.2□□□□□ -2.22
RNU4-53P-201ENST00000410828 MIEN1Q9BRT3 115 aa1.2□□□□□ -2.22
RNU4-53P-201ENST00000410828 SMCO4Q9NRQ5 59 aa1.2□□□□□ -2.22
RNU4-53P-201ENST00000410828 SPANXB1Q9NS25 103 aaPredicted RBP1.2□□□□□ -2.22
RNU4-53P-201ENST00000410828 DHRS4-AS1Q9P1J3 65 aa1.2□□□□□ -2.22
RNU4-53P-201ENST00000410828 CBY1Q9Y3M2 126 aa1.2□□□□□ -2.22
RNU4-53P-201ENST00000410828 CHTOPQ9Y3Y2 248 aaKnown RBP1.2□□□□□ -2.22
RNU4-53P-201ENST00000410828 MUC12Q9UKN1 5478 aa1.2□□□□□ -2.22
RNU4-53P-201ENST00000410828 TEX49A0A1B0GTD5 131 aa1.19□□□□□ -2.22
RNU4-53P-201ENST00000410828 FAM236DA0A1B0GTK5 79 aa1.19□□□□□ -2.22
RNU4-53P-201ENST00000410828 MYMXA0A1B0GTQ4 84 aa1.19□□□□□ -2.22
RNU4-53P-201ENST00000410828 TMEM223A0PJW6 202 aa1.19□□□□□ -2.22
RNU4-53P-201ENST00000410828 NDUFC2O95298 119 aa1.19□□□□□ -2.22
RNU4-53P-201ENST00000410828 HBDP02042 147 aa1.19□□□□□ -2.22
RNU4-53P-201ENST00000410828 FAM236CP0DP71 79 aa1.19□□□□□ -2.22
RNU4-53P-201ENST00000410828 LGALS3P17931 250 aaKnown RBP1.19□□□□□ -2.22
RNU4-53P-201ENST00000410828 Q1RN00 199 aa1.19□□□□□ -2.22
RNU4-53P-201ENST00000410828 COMMD7Q86VX2 200 aa1.19□□□□□ -2.22
RNU4-53P-201ENST00000410828 PCP2Q8IVA1 136 aa1.19□□□□□ -2.22
RNU4-53P-201ENST00000410828 DEFB105AQ8NG35 78 aa1.19□□□□□ -2.22
RNU4-53P-201ENST00000410828 C20orf166-AS1Q96NR2 134 aa1.19□□□□□ -2.22
RNU4-53P-201ENST00000410828 LINC00614P0C842 121 aa1.18□□□□□ -2.22
RNU4-53P-201ENST00000410828 IFITM2Q01629 132 aa1.18□□□□□ -2.22
RNU4-53P-201ENST00000410828 RHEBQ15382 184 aa1.18□□□□□ -2.22
RNU4-53P-201ENST00000410828 COX19Q49B96 90 aa1.18□□□□□ -2.22
RNU4-53P-201ENST00000410828 OBSCN-AS1Q96MR7 158 aa1.18□□□□□ -2.22
RNU4-53P-201ENST00000410828 A0A096LNJ9 63 aa1.17□□□□□ -2.22
RNU4-53P-201ENST00000410828 TRAV12-1A0A0B4J245 112 aa1.17□□□□□ -2.22
RNU4-53P-201ENST00000410828 A0A0G2JQZ4 141 aa1.17□□□□□ -2.22
RNU4-53P-201ENST00000410828 COX7BP24311 80 aa1.17□□□□□ -2.22
RNU4-53P-201ENST00000410828 S100PP25815 95 aa1.17□□□□□ -2.22
RNU4-53P-201ENST00000410828 FABP9Q0Z7S8 132 aa1.17□□□□□ -2.22
RNU4-53P-201ENST00000410828 OR13C6PQ8NH95 151 aa1.17□□□□□ -2.22
RNU4-53P-201ENST00000410828 Q96NJ1 140 aa1.17□□□□□ -2.22
RNU4-53P-201ENST00000410828 SEC11CQ9BY50 192 aa1.17□□□□□ -2.22
RNU4-53P-201ENST00000410828 RBM12B-AS1Q9P1G2 102 aa1.17□□□□□ -2.22
RNU4-53P-201ENST00000410828 IGLV5-48A0A075B6I7 105 aa1.16□□□□□ -2.22
RNU4-53P-201ENST00000410828 A8MUU9 505 aa1.16□□□□□ -2.22
RNU4-53P-201ENST00000410828 J3QQQ9 107 aa1.16□□□□□ -2.22
RNU4-53P-201ENST00000410828 LEPROTO15243 131 aa1.16□□□□□ -2.22
RNU4-53P-201ENST00000410828 NMUP48645 174 aa1.16□□□□□ -2.22
RNU4-53P-201ENST00000410828 ELOF1P60002 83 aaKnown RBP1.16□□□□□ -2.22
RNU4-53P-201ENST00000410828 HERVK_113P61574 105 aa1.16□□□□□ -2.22
RNU4-53P-201ENST00000410828 PMCHL1Q16048 86 aa1.16□□□□□ -2.22
RNU4-53P-201ENST00000410828 IGFL1Q6UW32 110 aa1.16□□□□□ -2.22
RNU4-53P-201ENST00000410828 SOSTDC1Q6X4U4 206 aa1.16□□□□□ -2.22
RNU4-53P-201ENST00000410828 Q6ZVH6 145 aa1.16□□□□□ -2.22
RNU4-53P-201ENST00000410828 MTURNQ8N3F0 131 aa1.16□□□□□ -2.22
RNU4-53P-201ENST00000410828 C18orf32Q8TCD1 76 aa1.16□□□□□ -2.22
RNU4-53P-201ENST00000410828 IFI27L1Q96BM0 104 aa1.16□□□□□ -2.22
RNU4-53P-201ENST00000410828 URB1-AS1Q96HZ7 61 aa1.16□□□□□ -2.22
RNU4-53P-201ENST00000410828 SPANXDQ9BXN6 97 aa1.16□□□□□ -2.22
RNU4-53P-201ENST00000410828 RPS10P5Q9NQ39 176 aa1.16□□□□□ -2.22
RNU4-53P-201ENST00000410828 SPANXCQ9NY87 97 aa1.16□□□□□ -2.22
RNU4-53P-201ENST00000410828 MDN1Q9NU22 5596 aa1.16□□□□□ -2.22
RNU4-53P-201ENST00000410828 TRBV7-6A0A0J9YX20 115 aa1.15□□□□□ -2.23
RNU4-53P-201ENST00000410828 TRBV7-7A0A0K0K1E9 115 aa1.15□□□□□ -2.23
RNU4-53P-201ENST00000410828 ZNF815PA8K554 130 aa1.15□□□□□ -2.23
RNU4-53P-201ENST00000410828 A8MWP4 228 aa1.15□□□□□ -2.23
RNU4-53P-201ENST00000410828 F8WEM9 126 aa1.15□□□□□ -2.23
RNU4-53P-201ENST00000410828 LST1O00453 97 aa1.15□□□□□ -2.23
RNU4-53P-201ENST00000410828 EIF4EBP3O60516 100 aaPredicted RBP1.15□□□□□ -2.23
RNU4-53P-201ENST00000410828 TSPEAR-AS2P59090 65 aa1.15□□□□□ -2.23
RNU4-53P-201ENST00000410828 NPC2P61916 151 aa1.15□□□□□ -2.23
RNU4-53P-201ENST00000410828 ADAMTSL4-AS1Q5T5F5 129 aa1.15□□□□□ -2.23
RNU4-53P-201ENST00000410828 Q6JHZ5 121 aa1.15□□□□□ -2.23
RNU4-53P-201ENST00000410828 LINC00518Q8N0U6 118 aa1.15□□□□□ -2.23
RNU4-53P-201ENST00000410828 Q8N9P0 234 aaPredicted RBP1.15□□□□□ -2.23
RNU4-53P-201ENST00000410828 MPLKIPQ8TAP9 179 aa1.15□□□□□ -2.23
RNU4-53P-201ENST00000410828 LINC00308Q8TCZ7 52 aa1.15□□□□□ -2.23
RNU4-53P-201ENST00000410828 NHP2Q9NX24 153 aaKnown RBP1.15□□□□□ -2.23
RNU4-53P-201ENST00000410828 TRAV13-2A0A0B4J235 113 aa1.14□□□□□ -2.23
RNU4-53P-201ENST00000410828 A0A0J9YXY3 114 aa1.14□□□□□ -2.23
RNU4-53P-201ENST00000410828 A0A1B0GWB2 263 aa1.14□□□□□ -2.23
RNU4-53P-201ENST00000410828 A4D1N5 150 aa1.14□□□□□ -2.23
RNU4-53P-201ENST00000410828 H0Y8G0 127 aa1.14□□□□□ -2.23
RNU4-53P-201ENST00000410828 KRTAP2-3P0C7H8 128 aa1.14□□□□□ -2.23
RNU4-53P-201ENST00000410828 HRES1P13985 223 aa1.14□□□□□ -2.23
RNU4-53P-201ENST00000410828 PLNP26678 52 aa1.14□□□□□ -2.23
RNU4-53P-201ENST00000410828 CLEC2BQ92478 149 aa1.14□□□□□ -2.23
RNU4-53P-201ENST00000410828 CHCHD1Q96BP2 118 aaKnown RBP1.14□□□□□ -2.23
RNU4-53P-201ENST00000410828 KRTAP2-4Q9BYR9 128 aa1.14□□□□□ -2.23
RNU4-53P-201ENST00000410828 TRAPPC1Q9Y5R8 145 aa1.14□□□□□ -2.23
RNU4-53P-201ENST00000410828 hCG_2014768A0A024R1R8 64 aa1.13□□□□□ -2.23
RNU4-53P-201ENST00000410828 A6NN06 94 aa1.13□□□□□ -2.23
RNU4-53P-201ENST00000410828 KRTAP16-1A8MUX0 517 aa1.13□□□□□ -2.23
RNU4-53P-201ENST00000410828 TIMM17BO60830 172 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms