RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 B5MCH6 92 aa13.31□□□□□ -0.28
PTCD3-203ENST00000409783 S100A12P80511 92 aa13.31□□□□□ -0.28
PTCD3-203ENST00000409783 LINC00518Q8N0U6 118 aa13.31□□□□□ -0.28
PTCD3-203ENST00000409783 COPS9Q8WXC6 57 aa13.31□□□□□ -0.28
PTCD3-203ENST00000409783 TRAV23DV6A0A075B6W5 121 aa13.3□□□□□ -0.28
PTCD3-203ENST00000409783 HIGD2AQ9BW72 106 aa13.3□□□□□ -0.28
PTCD3-203ENST00000409783 PAM16Q9Y3D7 125 aa13.3□□□□□ -0.28
PTCD3-203ENST00000409783 DLEU1O43261 78 aa13.29□□□□□ -0.28
PTCD3-203ENST00000409783 SPATA45Q537H7 98 aa13.29□□□□□ -0.28
PTCD3-203ENST00000409783 PYY3Q5JQD4 70 aa13.29□□□□□ -0.28
PTCD3-203ENST00000409783 ANAPC11Q9NYG5 84 aa13.28□□□□□ -0.28
PTCD3-203ENST00000409783 A0A087X002 238 aa13.27□□□□□ -0.29
PTCD3-203ENST00000409783 ZNF73O43830 326 aaPredicted RBP13.27□□□□□ -0.29
PTCD3-203ENST00000409783 OR13C6PQ8NH95 151 aa13.27□□□□□ -0.29
PTCD3-203ENST00000409783 SMCR5Q8TEV8 140 aa13.27□□□□□ -0.29
PTCD3-203ENST00000409783 VAMP8Q9BV40 100 aa13.27□□□□□ -0.29
PTCD3-203ENST00000409783 C14orf144Q96I85 54 aa13.26□□□□□ -0.29
PTCD3-203ENST00000409783 Q6ZRX8 168 aa13.25□□□□□ -0.29
PTCD3-203ENST00000409783 Q9BRP9 147 aa13.24□□□□□ -0.29
PTCD3-203ENST00000409783 RPL13AP40429 203 aaKnown RBP13.23□□□□□ -0.29
PTCD3-203ENST00000409783 CBY1Q9Y3M2 126 aa13.23□□□□□ -0.29
PTCD3-203ENST00000409783 FAM229BQ4G0N7 80 aa13.22□□□□□ -0.29
PTCD3-203ENST00000409783 SPRR4Q96PI1 79 aa13.22□□□□□ -0.29
PTCD3-203ENST00000409783 ERC2-IT1O76042 136 aa13.21□□□□□ -0.29
PTCD3-203ENST00000409783 CRYGAP11844 174 aa13.21□□□□□ -0.29
PTCD3-203ENST00000409783 KRTAP13-2Q52LG2 175 aa13.2□□□□□ -0.3
PTCD3-203ENST00000409783 HMCN2Q8NDA2 5059 aa13.2□□□□□ -0.3
PTCD3-203ENST00000409783 C2orf91Q6ZV80 131 aa13.19□□□□□ -0.3
PTCD3-203ENST00000409783 A4D1N5 150 aa13.18□□□□□ -0.3
PTCD3-203ENST00000409783 SLC25A34Q6PIV7 304 aa13.18□□□□□ -0.3
PTCD3-203ENST00000409783 HIGD1BQ9P298 99 aa13.18□□□□□ -0.3
PTCD3-203ENST00000409783 A6NDN8 102 aa13.17□□□□□ -0.3
PTCD3-203ENST00000409783 HIST1H4GQ99525 98 aa13.17□□□□□ -0.3
PTCD3-203ENST00000409783 ZNF706Q9Y5V0 76 aaPredicted RBP13.16□□□□□ -0.3
PTCD3-203ENST00000409783 TRAV13-2A0A0B4J235 113 aa13.15□□□□□ -0.3
PTCD3-203ENST00000409783 C6orf99Q4VX62 202 aa13.15□□□□□ -0.3
PTCD3-203ENST00000409783 HINT1P49773 126 aaPredicted RBP13.14□□□□□ -0.31
PTCD3-203ENST00000409783 ELOF1P60002 83 aaKnown RBP13.13□□□□□ -0.31
PTCD3-203ENST00000409783 TYMSOSQ8TAI1 123 aa13.13□□□□□ -0.31
PTCD3-203ENST00000409783 LINC00483Q53H64 154 aa13.12□□□□□ -0.31
PTCD3-203ENST00000409783 TRBV7-6A0A0J9YX20 115 aa13.1□□□□□ -0.31
PTCD3-203ENST00000409783 COX7BP24311 80 aa13.1□□□□□ -0.31
PTCD3-203ENST00000409783 C3orf22Q8N5N4 141 aa13.1□□□□□ -0.31
PTCD3-203ENST00000409783 SMIM11BQ8TCY0 68 aa13.1□□□□□ -0.31
PTCD3-203ENST00000409783 GAGE2AQ6NT46 116 aa13.08□□□□□ -0.32
PTCD3-203ENST00000409783 ST20-AS1Q8NBB2 130 aa13.07□□□□□ -0.32
PTCD3-203ENST00000409783 C12orf57Q99622 126 aa13.07□□□□□ -0.32
PTCD3-203ENST00000409783 DHRS4-AS1Q9P1J3 65 aa13.07□□□□□ -0.32
PTCD3-203ENST00000409783 A0A1B0GWB2 263 aa13.05□□□□□ -0.32
PTCD3-203ENST00000409783 TAL2Q16559 108 aa13.05□□□□□ -0.32
PTCD3-203ENST00000409783 CFC1BP0CG36 223 aa13.03□□□□□ -0.32
PTCD3-203ENST00000409783 CFC1P0CG37 223 aa13.03□□□□□ -0.32
PTCD3-203ENST00000409783 CEND1Q8N111 149 aa13.02□□□□□ -0.33
PTCD3-203ENST00000409783 SPRR1BP22528 89 aa12.99□□□□□ -0.33
PTCD3-203ENST00000409783 LINC00304Q8N9R0 145 aa12.99□□□□□ -0.33
PTCD3-203ENST00000409783 A0A0B4J2C4 111 aa12.97□□□□□ -0.33
PTCD3-203ENST00000409783 FXYD2P54710 66 aa12.97□□□□□ -0.33
PTCD3-203ENST00000409783 UQCR10Q9UDW1 63 aa12.97□□□□□ -0.33
PTCD3-203ENST00000409783 TSPAN13O95857 204 aa12.96□□□□□ -0.33
PTCD3-203ENST00000409783 HSD52Q0P140 79 aa12.94□□□□□ -0.34
PTCD3-203ENST00000409783 IGLV9-49A0A0B4J1Y8 123 aa12.93□□□□□ -0.34
PTCD3-203ENST00000409783 LINC01547P58512 204 aaPredicted RBP12.93□□□□□ -0.34
PTCD3-203ENST00000409783 RAB37Q96AX2 223 aa12.93□□□□□ -0.34
PTCD3-203ENST00000409783 MOBPQ13875 183 aa12.92□□□□□ -0.34
PTCD3-203ENST00000409783 VAMP3Q15836 100 aa12.92□□□□□ -0.34
PTCD3-203ENST00000409783 LINC00575Q6W349 94 aa12.92□□□□□ -0.34
PTCD3-203ENST00000409783 Q8NBF4 154 aa12.92□□□□□ -0.34
PTCD3-203ENST00000409783 IGLV5-48A0A075B6I7 105 aa12.9□□□□□ -0.34
PTCD3-203ENST00000409783 TMEM238LA0A1B0GVL6 79 aa12.9□□□□□ -0.34
PTCD3-203ENST00000409783 A6NJY4 79 aa12.9□□□□□ -0.34
PTCD3-203ENST00000409783 SMIM6P0DI80 62 aa12.9□□□□□ -0.34
PTCD3-203ENST00000409783 CTAG1AP78358 180 aa12.9□□□□□ -0.34
PTCD3-203ENST00000409783 SSBP3-AS1Q7Z2R9 100 aa12.9□□□□□ -0.34
PTCD3-203ENST00000409783 NHP2Q9NX24 153 aaKnown RBP12.9□□□□□ -0.34
PTCD3-203ENST00000409783 LOC105371267A0A1B0GV96 52 aa12.89□□□□□ -0.35
PTCD3-203ENST00000409783 H7C2G1 150 aa12.89□□□□□ -0.35
PTCD3-203ENST00000409783 SPAG11AQ6PDA7 123 aa12.88□□□□□ -0.35
PTCD3-203ENST00000409783 DEFB105AQ8NG35 78 aa12.88□□□□□ -0.35
PTCD3-203ENST00000409783 TEX49A0A1B0GTD5 131 aa12.87□□□□□ -0.35
PTCD3-203ENST00000409783 BVES-AS1Q5T3Y7 98 aa12.87□□□□□ -0.35
PTCD3-203ENST00000409783 PRO1933Q9H354 126 aa12.87□□□□□ -0.35
PTCD3-203ENST00000409783 PRO1854Q9UHT4 67 aa12.87□□□□□ -0.35
PTCD3-203ENST00000409783 SMIM29Q86T20 159 aa12.86□□□□□ -0.35
PTCD3-203ENST00000409783 LRP2P98164 4655 aa12.85□□□□□ -0.35
PTCD3-203ENST00000409783 SLC25A20O43772 301 aa12.85□□□□□ -0.35
PTCD3-203ENST00000409783 hADV29S1A0JD25 119 aa12.84□□□□□ -0.35
PTCD3-203ENST00000409783 Q8N377 158 aa12.84□□□□□ -0.35
PTCD3-203ENST00000409783 LAMTOR3Q9UHA4 124 aa12.84□□□□□ -0.35
PTCD3-203ENST00000409783 C9orf153Q5TBE3 101 aa12.83□□□□□ -0.36
PTCD3-203ENST00000409783 Q1RN00 199 aa12.81□□□□□ -0.36
PTCD3-203ENST00000409783 C4orf48Q5BLP8 95 aa12.81□□□□□ -0.36
PTCD3-203ENST00000409783 K7ERJ3 54 aa12.8□□□□□ -0.36
PTCD3-203ENST00000409783 SPINK1P00995 79 aa12.8□□□□□ -0.36
PTCD3-203ENST00000409783 Q6ZQY7 126 aa12.8□□□□□ -0.36
PTCD3-203ENST00000409783 LPAP08519 4548 aa12.8□□□□□ -0.36
PTCD3-203ENST00000409783 PRR4Q16378 134 aa12.79□□□□□ -0.36
PTCD3-203ENST00000409783 RETNLBQ9BQ08 111 aa12.78□□□□□ -0.36
PTCD3-203ENST00000409783 H0YGX0 51 aa12.77□□□□□ -0.37
PTCD3-203ENST00000409783 FAM218AQ96MZ4 157 aa12.77□□□□□ -0.37
PTCD3-203ENST00000409783 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms