RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 TRAV23DV6A0A075B6W5 121 aa18.4■□□□□ 0.54
TRAF3IP1-203ENST00000409739 B5MCH6 92 aa18.4■□□□□ 0.54
TRAF3IP1-203ENST00000409739 SCGB1D1O95968 90 aa18.37■□□□□ 0.53
TRAF3IP1-203ENST00000409739 KRTAP13-2Q52LG2 175 aa18.37■□□□□ 0.53
TRAF3IP1-203ENST00000409739 SMCR5Q8TEV8 140 aa18.37■□□□□ 0.53
TRAF3IP1-203ENST00000409739 TYMSOSQ8TAI1 123 aa18.36■□□□□ 0.53
TRAF3IP1-203ENST00000409739 SPRR4Q96PI1 79 aa18.35■□□□□ 0.53
TRAF3IP1-203ENST00000409739 Q6ZRX8 168 aa18.34■□□□□ 0.53
TRAF3IP1-203ENST00000409739 Q6ZVH6 145 aa18.34■□□□□ 0.53
TRAF3IP1-203ENST00000409739 IFITM1P13164 125 aa18.33■□□□□ 0.52
TRAF3IP1-203ENST00000409739 OR13C6PQ8NH95 151 aa18.33■□□□□ 0.52
TRAF3IP1-203ENST00000409739 COPS9Q8WXC6 57 aa18.33■□□□□ 0.52
TRAF3IP1-203ENST00000409739 PPDPFQ9H3Y8 114 aa18.33■□□□□ 0.52
TRAF3IP1-203ENST00000409739 ZNF73O43830 326 aaPredicted RBP18.32■□□□□ 0.52
TRAF3IP1-203ENST00000409739 ZNF706Q9Y5V0 76 aaPredicted RBP18.32■□□□□ 0.52
TRAF3IP1-203ENST00000409739 Q9BRP9 147 aa18.31■□□□□ 0.52
TRAF3IP1-203ENST00000409739 LINC00518Q8N0U6 118 aa18.3■□□□□ 0.52
TRAF3IP1-203ENST00000409739 CBY1Q9Y3M2 126 aa18.3■□□□□ 0.52
TRAF3IP1-203ENST00000409739 MUSTN1Q8IVN3 82 aa18.28■□□□□ 0.52
TRAF3IP1-203ENST00000409739 ERC2-IT1O76042 136 aa18.27■□□□□ 0.52
TRAF3IP1-203ENST00000409739 JOSD1Q15040 202 aaPredicted RBP18.23■□□□□ 0.51
TRAF3IP1-203ENST00000409739 C3orf22Q8N5N4 141 aa18.23■□□□□ 0.51
TRAF3IP1-203ENST00000409739 HINT1P49773 126 aaPredicted RBP18.19■□□□□ 0.5
TRAF3IP1-203ENST00000409739 LINC00483Q53H64 154 aa18.19■□□□□ 0.5
TRAF3IP1-203ENST00000409739 TSPAN13O95857 204 aa18.17■□□□□ 0.5
TRAF3IP1-203ENST00000409739 COX8AP10176 69 aa18.17■□□□□ 0.5
TRAF3IP1-203ENST00000409739 GAGE2AQ6NT46 116 aa18.16■□□□□ 0.5
TRAF3IP1-203ENST00000409739 LINC00304Q8N9R0 145 aa18.16■□□□□ 0.5
TRAF3IP1-203ENST00000409739 C6orf99Q4VX62 202 aa18.14■□□□□ 0.49
TRAF3IP1-203ENST00000409739 A6NDN8 102 aa18.13■□□□□ 0.49
TRAF3IP1-203ENST00000409739 PAM16Q9Y3D7 125 aa18.12■□□□□ 0.49
TRAF3IP1-203ENST00000409739 LRP2P98164 4655 aa18.11■□□□□ 0.49
TRAF3IP1-203ENST00000409739 ELOF1P60002 83 aaKnown RBP18.11■□□□□ 0.49
TRAF3IP1-203ENST00000409739 DLEU1O43261 78 aa18.09■□□□□ 0.49
TRAF3IP1-203ENST00000409739 COX7BP24311 80 aa18.09■□□□□ 0.49
TRAF3IP1-203ENST00000409739 SPATA45Q537H7 98 aa18.09■□□□□ 0.49
TRAF3IP1-203ENST00000409739 TMA7Q9Y2S6 64 aaKnown RBP18.09■□□□□ 0.49
TRAF3IP1-203ENST00000409739 TRAV13-2A0A0B4J235 113 aa18.08■□□□□ 0.48
TRAF3IP1-203ENST00000409739 VAMP8Q9BV40 100 aa18.08■□□□□ 0.48
TRAF3IP1-203ENST00000409739 ST20-AS1Q8NBB2 130 aa18.07■□□□□ 0.48
TRAF3IP1-203ENST00000409739 DHRS4-AS1Q9P1J3 65 aa18.07■□□□□ 0.48
TRAF3IP1-203ENST00000409739 A4D1N5 150 aa18.06■□□□□ 0.48
TRAF3IP1-203ENST00000409739 C14orf144Q96I85 54 aa18.06■□□□□ 0.48
TRAF3IP1-203ENST00000409739 TRBV7-6A0A0J9YX20 115 aa18.04■□□□□ 0.48
TRAF3IP1-203ENST00000409739 HIST1H4GQ99525 98 aa18.03■□□□□ 0.48
TRAF3IP1-203ENST00000409739 PRR4Q16378 134 aa18.01■□□□□ 0.47
TRAF3IP1-203ENST00000409739 Q8NBF4 154 aa18.01■□□□□ 0.47
TRAF3IP1-203ENST00000409739 SMIM11BQ8TCY0 68 aa18.01■□□□□ 0.47
TRAF3IP1-203ENST00000409739 IGLV9-49A0A0B4J1Y8 123 aa18■□□□□ 0.47
TRAF3IP1-203ENST00000409739 A0A1B0GWB2 263 aa18■□□□□ 0.47
TRAF3IP1-203ENST00000409739 MOBPQ13875 183 aa17.99■□□□□ 0.47
TRAF3IP1-203ENST00000409739 CTAG1AP78358 180 aa17.98■□□□□ 0.47
TRAF3IP1-203ENST00000409739 PYY3Q5JQD4 70 aa17.97■□□□□ 0.47
TRAF3IP1-203ENST00000409739 LPAP08519 4548 aa17.97■□□□□ 0.47
TRAF3IP1-203ENST00000409739 SPAG11AQ6PDA7 123 aa17.96■□□□□ 0.47
TRAF3IP1-203ENST00000409739 SLC25A34Q6PIV7 304 aa17.96■□□□□ 0.47
TRAF3IP1-203ENST00000409739 HIGD1BQ9P298 99 aa17.96■□□□□ 0.47
TRAF3IP1-203ENST00000409739 UBR4Q5T4S7 5183 aa17.96■□□□□ 0.47
TRAF3IP1-203ENST00000409739 C12orf57Q99622 126 aa17.94■□□□□ 0.46
TRAF3IP1-203ENST00000409739 SPRR1BP22528 89 aa17.93■□□□□ 0.46
TRAF3IP1-203ENST00000409739 C2orf91Q6ZV80 131 aa17.93■□□□□ 0.46
TRAF3IP1-203ENST00000409739 RETNLBQ9BQ08 111 aa17.91■□□□□ 0.46
TRAF3IP1-203ENST00000409739 C4orf48Q5BLP8 95 aa17.9■□□□□ 0.46
TRAF3IP1-203ENST00000409739 SSBP3-AS1Q7Z2R9 100 aa17.9■□□□□ 0.46
TRAF3IP1-203ENST00000409739 C9orf153Q5TBE3 101 aa17.89■□□□□ 0.45
TRAF3IP1-203ENST00000409739 TAL2Q16559 108 aa17.83■□□□□ 0.44
TRAF3IP1-203ENST00000409739 DEFB105AQ8NG35 78 aa17.83■□□□□ 0.44
TRAF3IP1-203ENST00000409739 SPINK1P00995 79 aa17.82■□□□□ 0.44
TRAF3IP1-203ENST00000409739 NHP2Q9NX24 153 aaKnown RBP17.82■□□□□ 0.44
TRAF3IP1-203ENST00000409739 VAMP3Q15836 100 aa17.81■□□□□ 0.44
TRAF3IP1-203ENST00000409739 TEX49A0A1B0GTD5 131 aa17.8■□□□□ 0.44
TRAF3IP1-203ENST00000409739 CFC1BP0CG36 223 aa17.8■□□□□ 0.44
TRAF3IP1-203ENST00000409739 CFC1P0CG37 223 aa17.8■□□□□ 0.44
TRAF3IP1-203ENST00000409739 LINC01547P58512 204 aaPredicted RBP17.8■□□□□ 0.44
TRAF3IP1-203ENST00000409739 LAMTOR3Q9UHA4 124 aa17.8■□□□□ 0.44
TRAF3IP1-203ENST00000409739 IGLV5-48A0A075B6I7 105 aa17.79■□□□□ 0.44
TRAF3IP1-203ENST00000409739 CEND1Q8N111 149 aa17.77■□□□□ 0.44
TRAF3IP1-203ENST00000409739 Q1RN00 199 aa17.76■□□□□ 0.43
TRAF3IP1-203ENST00000409739 LINC00575Q6W349 94 aa17.76■□□□□ 0.43
TRAF3IP1-203ENST00000409739 A0A0B4J2C4 111 aa17.75■□□□□ 0.43
TRAF3IP1-203ENST00000409739 SLC25A20O43772 301 aa17.75■□□□□ 0.43
TRAF3IP1-203ENST00000409739 RPS29P62273 56 aaKnown RBP17.74■□□□□ 0.43
TRAF3IP1-203ENST00000409739 RAB37Q96AX2 223 aa17.74■□□□□ 0.43
TRAF3IP1-203ENST00000409739 SMIM29Q86T20 159 aa17.72■□□□□ 0.43
TRAF3IP1-203ENST00000409739 H7C2G1 150 aa17.71■□□□□ 0.43
TRAF3IP1-203ENST00000409739 BVES-AS1Q5T3Y7 98 aa17.7■□□□□ 0.42
TRAF3IP1-203ENST00000409739 IGLV7-46A0A075B6I9 117 aa17.69■□□□□ 0.42
TRAF3IP1-203ENST00000409739 hADV29S1A0JD25 119 aa17.68■□□□□ 0.42
TRAF3IP1-203ENST00000409739 FXYD2P54710 66 aa17.68■□□□□ 0.42
TRAF3IP1-203ENST00000409739 Q8N377 158 aa17.68■□□□□ 0.42
TRAF3IP1-203ENST00000409739 TMEM238LA0A1B0GVL6 79 aa17.67■□□□□ 0.42
TRAF3IP1-203ENST00000409739 A6NJY4 79 aa17.67■□□□□ 0.42
TRAF3IP1-203ENST00000409739 Q6ZQY7 126 aa17.65■□□□□ 0.42
TRAF3IP1-203ENST00000409739 FP248Q71RG6 208 aaPredicted RBP17.64■□□□□ 0.41
TRAF3IP1-203ENST00000409739 HSD52Q0P140 79 aa17.63■□□□□ 0.41
TRAF3IP1-203ENST00000409739 TPRXLQ17RH7 258 aa17.63■□□□□ 0.41
TRAF3IP1-203ENST00000409739 UQCR10Q9UDW1 63 aa17.62■□□□□ 0.41
TRAF3IP1-203ENST00000409739 PRO1933Q9H354 126 aa17.6■□□□□ 0.41
TRAF3IP1-203ENST00000409739 PRO1854Q9UHT4 67 aa17.59■□□□□ 0.41
TRAF3IP1-203ENST00000409739 HRCT1Q6UXD1 115 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms