RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 B5MCH6 92 aa10.56□□□□□ -0.72
PDLIM2-206ENST00000409141 PCP2Q8IVA1 136 aa10.56□□□□□ -0.72
PDLIM2-206ENST00000409141 TRAV23DV6A0A075B6W5 121 aa10.55□□□□□ -0.72
PDLIM2-206ENST00000409141 OR13C6PQ8NH95 151 aa10.55□□□□□ -0.72
PDLIM2-206ENST00000409141 SPRR4Q96PI1 79 aa10.55□□□□□ -0.72
PDLIM2-206ENST00000409141 ZNF706Q9Y5V0 76 aaPredicted RBP10.55□□□□□ -0.72
PDLIM2-206ENST00000409141 SPANXDQ9BXN6 97 aa10.55□□□□□ -0.72
PDLIM2-206ENST00000409141 HSBP1L1C9JCN9 74 aa10.54□□□□□ -0.72
PDLIM2-206ENST00000409141 ZNF73O43830 326 aaPredicted RBP10.53□□□□□ -0.72
PDLIM2-206ENST00000409141 TSPAN13O95857 204 aa10.53□□□□□ -0.72
PDLIM2-206ENST00000409141 CBY1Q9Y3M2 126 aa10.53□□□□□ -0.72
PDLIM2-206ENST00000409141 Q6ZRX8 168 aa10.52□□□□□ -0.73
PDLIM2-206ENST00000409141 LINC00518Q8N0U6 118 aa10.52□□□□□ -0.73
PDLIM2-206ENST00000409141 COPS9Q8WXC6 57 aa10.52□□□□□ -0.73
PDLIM2-206ENST00000409141 SCGB1D1O95968 90 aa10.51□□□□□ -0.73
PDLIM2-206ENST00000409141 IFITM1P13164 125 aa10.5□□□□□ -0.73
PDLIM2-206ENST00000409141 Q6ZVH6 145 aa10.5□□□□□ -0.73
PDLIM2-206ENST00000409141 UBR4Q5T4S7 5183 aa10.5□□□□□ -0.73
PDLIM2-206ENST00000409141 HINT1P49773 126 aaPredicted RBP10.49□□□□□ -0.73
PDLIM2-206ENST00000409141 JOSD1Q15040 202 aaPredicted RBP10.49□□□□□ -0.73
PDLIM2-206ENST00000409141 C3orf22Q8N5N4 141 aa10.49□□□□□ -0.73
PDLIM2-206ENST00000409141 Q9BRP9 147 aa10.49□□□□□ -0.73
PDLIM2-206ENST00000409141 PPDPFQ9H3Y8 114 aa10.49□□□□□ -0.73
PDLIM2-206ENST00000409141 ERC2-IT1O76042 136 aa10.49□□□□□ -0.73
PDLIM2-206ENST00000409141 MUSTN1Q8IVN3 82 aa10.49□□□□□ -0.73
PDLIM2-206ENST00000409141 LINC00304Q8N9R0 145 aa10.48□□□□□ -0.73
PDLIM2-206ENST00000409141 GAGE2AQ6NT46 116 aa10.47□□□□□ -0.73
PDLIM2-206ENST00000409141 PRR4Q16378 134 aa10.44□□□□□ -0.74
PDLIM2-206ENST00000409141 LINC00483Q53H64 154 aa10.44□□□□□ -0.74
PDLIM2-206ENST00000409141 LRP2P98164 4655 aa10.43□□□□□ -0.74
PDLIM2-206ENST00000409141 A6NDN8 102 aa10.42□□□□□ -0.74
PDLIM2-206ENST00000409141 C6orf99Q4VX62 202 aa10.41□□□□□ -0.74
PDLIM2-206ENST00000409141 COX7BP24311 80 aa10.4□□□□□ -0.74
PDLIM2-206ENST00000409141 DHRS4-AS1Q9P1J3 65 aa10.4□□□□□ -0.74
PDLIM2-206ENST00000409141 ST20-AS1Q8NBB2 130 aa10.38□□□□□ -0.75
PDLIM2-206ENST00000409141 IGLV9-49A0A0B4J1Y8 123 aa10.37□□□□□ -0.75
PDLIM2-206ENST00000409141 TRAV13-2A0A0B4J235 113 aa10.37□□□□□ -0.75
PDLIM2-206ENST00000409141 ELOF1P60002 83 aaKnown RBP10.37□□□□□ -0.75
PDLIM2-206ENST00000409141 CTAG1AP78358 180 aa10.37□□□□□ -0.75
PDLIM2-206ENST00000409141 C4orf48Q5BLP8 95 aa10.37□□□□□ -0.75
PDLIM2-206ENST00000409141 SPAG11AQ6PDA7 123 aa10.37□□□□□ -0.75
PDLIM2-206ENST00000409141 Q8NBF4 154 aa10.37□□□□□ -0.75
PDLIM2-206ENST00000409141 COX8AP10176 69 aa10.36□□□□□ -0.75
PDLIM2-206ENST00000409141 TRBV7-6A0A0J9YX20 115 aa10.35□□□□□ -0.75
PDLIM2-206ENST00000409141 MOBPQ13875 183 aa10.35□□□□□ -0.75
PDLIM2-206ENST00000409141 LOC105371267A0A1B0GV96 52 aa10.34□□□□□ -0.75
PDLIM2-206ENST00000409141 RETNLBQ9BQ08 111 aa10.34□□□□□ -0.75
PDLIM2-206ENST00000409141 A4D1N5 150 aa10.33□□□□□ -0.76
PDLIM2-206ENST00000409141 SSBP3-AS1Q7Z2R9 100 aa10.33□□□□□ -0.76
PDLIM2-206ENST00000409141 HIST1H4GQ99525 98 aa10.33□□□□□ -0.76
PDLIM2-206ENST00000409141 A0A1B0GWB2 263 aa10.32□□□□□ -0.76
PDLIM2-206ENST00000409141 DLEU1O43261 78 aa10.32□□□□□ -0.76
PDLIM2-206ENST00000409141 SPATA45Q537H7 98 aa10.32□□□□□ -0.76
PDLIM2-206ENST00000409141 C14orf144Q96I85 54 aa10.32□□□□□ -0.76
PDLIM2-206ENST00000409141 PAM16Q9Y3D7 125 aa10.32□□□□□ -0.76
PDLIM2-206ENST00000409141 PYY3Q5JQD4 70 aa10.31□□□□□ -0.76
PDLIM2-206ENST00000409141 SMIM11BQ8TCY0 68 aa10.31□□□□□ -0.76
PDLIM2-206ENST00000409141 VAMP8Q9BV40 100 aa10.3□□□□□ -0.76
PDLIM2-206ENST00000409141 LPAP08519 4548 aa10.3□□□□□ -0.76
PDLIM2-206ENST00000409141 C9orf153Q5TBE3 101 aa10.3□□□□□ -0.76
PDLIM2-206ENST00000409141 SPINK1P00995 79 aa10.29□□□□□ -0.76
PDLIM2-206ENST00000409141 SPRR1BP22528 89 aa10.29□□□□□ -0.76
PDLIM2-206ENST00000409141 TAL2Q16559 108 aa10.29□□□□□ -0.76
PDLIM2-206ENST00000409141 SLC25A34Q6PIV7 304 aa10.29□□□□□ -0.76
PDLIM2-206ENST00000409141 DEFB105AQ8NG35 78 aa10.28□□□□□ -0.76
PDLIM2-206ENST00000409141 VAMP3Q15836 100 aa10.26□□□□□ -0.77
PDLIM2-206ENST00000409141 SMIM6P0DI80 62 aa10.25□□□□□ -0.77
PDLIM2-206ENST00000409141 C12orf57Q99622 126 aa10.25□□□□□ -0.77
PDLIM2-206ENST00000409141 LAMTOR3Q9UHA4 124 aa10.25□□□□□ -0.77
PDLIM2-206ENST00000409141 NHP2Q9NX24 153 aaKnown RBP10.24□□□□□ -0.77
PDLIM2-206ENST00000409141 HIGD1BQ9P298 99 aa10.24□□□□□ -0.77
PDLIM2-206ENST00000409141 RNF213Q63HN8 5207 aa10.24□□□□□ -0.77
PDLIM2-206ENST00000409141 IGLV7-46A0A075B6I9 117 aa10.23□□□□□ -0.77
PDLIM2-206ENST00000409141 TEX49A0A1B0GTD5 131 aa10.23□□□□□ -0.77
PDLIM2-206ENST00000409141 SLC25A20O43772 301 aa10.21□□□□□ -0.78
PDLIM2-206ENST00000409141 Q1RN00 199 aa10.21□□□□□ -0.78
PDLIM2-206ENST00000409141 RPS29P62273 56 aaKnown RBP10.2□□□□□ -0.78
PDLIM2-206ENST00000409141 C2orf91Q6ZV80 131 aa10.2□□□□□ -0.78
PDLIM2-206ENST00000409141 IGLV5-48A0A075B6I7 105 aa10.18□□□□□ -0.78
PDLIM2-206ENST00000409141 LINC01547P58512 204 aaPredicted RBP10.18□□□□□ -0.78
PDLIM2-206ENST00000409141 LINC00575Q6W349 94 aa10.18□□□□□ -0.78
PDLIM2-206ENST00000409141 CFC1BP0CG36 223 aa10.17□□□□□ -0.78
PDLIM2-206ENST00000409141 CFC1P0CG37 223 aa10.17□□□□□ -0.78
PDLIM2-206ENST00000409141 FP248Q71RG6 208 aaPredicted RBP10.17□□□□□ -0.78
PDLIM2-206ENST00000409141 RAB37Q96AX2 223 aa10.17□□□□□ -0.78
PDLIM2-206ENST00000409141 SMIM29Q86T20 159 aa10.17□□□□□ -0.78
PDLIM2-206ENST00000409141 H7C2G1 150 aa10.16□□□□□ -0.78
PDLIM2-206ENST00000409141 TPRXLQ17RH7 258 aa10.16□□□□□ -0.78
PDLIM2-206ENST00000409141 Q8N377 158 aa10.16□□□□□ -0.78
PDLIM2-206ENST00000409141 hADV29S1A0JD25 119 aa10.15□□□□□ -0.78
PDLIM2-206ENST00000409141 BVES-AS1Q5T3Y7 98 aa10.15□□□□□ -0.78
PDLIM2-206ENST00000409141 HRCT1Q6UXD1 115 aa10.15□□□□□ -0.78
PDLIM2-206ENST00000409141 CEND1Q8N111 149 aa10.14□□□□□ -0.79
PDLIM2-206ENST00000409141 CDIP1Q9H305 208 aa10.14□□□□□ -0.79
PDLIM2-206ENST00000409141 PRO1933Q9H354 126 aa10.14□□□□□ -0.79
PDLIM2-206ENST00000409141 A0A0B4J2C4 111 aa10.12□□□□□ -0.79
PDLIM2-206ENST00000409141 Q6ZQY7 126 aa10.12□□□□□ -0.79
PDLIM2-206ENST00000409141 TMEM238LA0A1B0GVL6 79 aa10.1□□□□□ -0.79
PDLIM2-206ENST00000409141 A6NJY4 79 aa10.1□□□□□ -0.79
PDLIM2-206ENST00000409141 LIMD2Q9BT23 127 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms