RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 HIVEP1P15822 2718 aa7□□□□□ -1.29
CLIP4-204ENST00000404424 ATRQ13535 2644 aa7□□□□□ -1.29
CLIP4-204ENST00000404424 A0A1B0GW54 56 aa7□□□□□ -1.29
CLIP4-204ENST00000404424 NREPQ16612 68 aa7□□□□□ -1.29
CLIP4-204ENST00000404424 SERTAD4-AS1Q5TG53 156 aa7□□□□□ -1.29
CLIP4-204ENST00000404424 SCXQ7RTU7 201 aa7□□□□□ -1.29
CLIP4-204ENST00000404424 IGLV5-48A0A075B6I7 105 aa6.99□□□□□ -1.29
CLIP4-204ENST00000404424 IGLV5-37A0A075B6J1 123 aa6.99□□□□□ -1.29
CLIP4-204ENST00000404424 Q8N377 158 aa6.99□□□□□ -1.29
CLIP4-204ENST00000404424 PRYO14603 147 aa6.98□□□□□ -1.29
CLIP4-204ENST00000404424 OXTP01178 125 aa6.98□□□□□ -1.29
CLIP4-204ENST00000404424 MRAPQ8TCY5 172 aa6.98□□□□□ -1.29
CLIP4-204ENST00000404424 NDUFC1O43677 76 aa6.98□□□□□ -1.29
CLIP4-204ENST00000404424 Q6ZRX8 168 aa6.97□□□□□ -1.29
CLIP4-204ENST00000404424 BPY2O14599 106 aa6.96□□□□□ -1.29
CLIP4-204ENST00000404424 ERC2-IT1O76042 136 aa6.96□□□□□ -1.29
CLIP4-204ENST00000404424 TM2D3Q9BRN9 247 aa6.96□□□□□ -1.29
CLIP4-204ENST00000404424 IGLV1-50A0A075B6I6 118 aa6.96□□□□□ -1.3
CLIP4-204ENST00000404424 KRTAP4-16G5E9R7 235 aaPredicted RBP6.96□□□□□ -1.3
CLIP4-204ENST00000404424 IGKV4-1P06312 121 aa6.96□□□□□ -1.3
CLIP4-204ENST00000404424 SPRR1AP35321 89 aa6.96□□□□□ -1.3
CLIP4-204ENST00000404424 DEFB105AQ8NG35 78 aa6.96□□□□□ -1.3
CLIP4-204ENST00000404424 HECTD1Q9ULT8 2610 aa6.96□□□□□ -1.3
CLIP4-204ENST00000404424 SERP1Q9Y6X1 66 aa6.95□□□□□ -1.3
CLIP4-204ENST00000404424 FUSP35637 526 aaKnown RBP eCLIP6.95□□□□□ -1.3
CLIP4-204ENST00000404424 C5orf47Q569G3 176 aa6.95□□□□□ -1.3
CLIP4-204ENST00000404424 RMI2Q96E14 147 aa6.95□□□□□ -1.3
CLIP4-204ENST00000404424 SNURFQ9Y675 71 aa6.95□□□□□ -1.3
CLIP4-204ENST00000404424 ETDCA0A1B0GVM5 59 aa6.94□□□□□ -1.3
CLIP4-204ENST00000404424 EPM2AB3EWF7 344 aa6.94□□□□□ -1.3
CLIP4-204ENST00000404424 LINC00588Q9Y4M8 146 aa6.94□□□□□ -1.3
CLIP4-204ENST00000404424 ANK2Q01484 3957 aa6.94□□□□□ -1.3
CLIP4-204ENST00000404424 C3orf84H3BNL1 204 aa6.93□□□□□ -1.3
CLIP4-204ENST00000404424 Q9BRP9 147 aa6.93□□□□□ -1.3
CLIP4-204ENST00000404424 F8WEM9 126 aa6.93□□□□□ -1.3
CLIP4-204ENST00000404424 TNP2Q05952 138 aa6.93□□□□□ -1.3
CLIP4-204ENST00000404424 RPL37AP8A6NKH3 93 aa6.92□□□□□ -1.3
CLIP4-204ENST00000404424 ATP5EP56381 51 aaPredicted RBP6.92□□□□□ -1.3
CLIP4-204ENST00000404424 KRTAP24-1Q3LI83 254 aa6.92□□□□□ -1.3
CLIP4-204ENST00000404424 Q8N9L7 120 aa6.92□□□□□ -1.3
CLIP4-204ENST00000404424 FAM168BA1KXE4 195 aa6.91□□□□□ -1.3
CLIP4-204ENST00000404424 C1orf137Q5JT78 98 aa6.91□□□□□ -1.3
CLIP4-204ENST00000404424 Q5XG85 94 aa6.91□□□□□ -1.3
CLIP4-204ENST00000404424 TMEM254Q8TBM7 123 aa6.91□□□□□ -1.3
CLIP4-204ENST00000404424 MRPL55Q7Z7F7 128 aaKnown RBP6.91□□□□□ -1.3
CLIP4-204ENST00000404424 OCR1Q9BZK8 76 aa6.91□□□□□ -1.3
CLIP4-204ENST00000404424 A0A1W2PNM2 257 aa6.9□□□□□ -1.3
CLIP4-204ENST00000404424 CASC10Q5T4H9 136 aa6.9□□□□□ -1.31
CLIP4-204ENST00000404424 KRTAP7-1Q8IUC3 87 aa6.9□□□□□ -1.31
CLIP4-204ENST00000404424 Q8NBF4 154 aa6.9□□□□□ -1.31
CLIP4-204ENST00000404424 SPRR4Q96PI1 79 aa6.89□□□□□ -1.31
CLIP4-204ENST00000404424 CMYA5Q8N3K9 4069 aa6.89□□□□□ -1.31
CLIP4-204ENST00000404424 C4orf26Q17RF5 130 aa6.88□□□□□ -1.31
CLIP4-204ENST00000404424 ST20-AS1Q8NBB2 130 aa6.88□□□□□ -1.31
CLIP4-204ENST00000404424 DNAH3Q8TD57 4116 aa6.87□□□□□ -1.31
CLIP4-204ENST00000404424 DNAH1Q9P2D7 4330 aa6.87□□□□□ -1.31
CLIP4-204ENST00000404424 REG3GQ6UW15 175 aa6.87□□□□□ -1.31
CLIP4-204ENST00000404424 A0A0U1RQV1 116 aa6.86□□□□□ -1.31
CLIP4-204ENST00000404424 UBE2BP63146 152 aa6.86□□□□□ -1.31
CLIP4-204ENST00000404424 PKD1L1Q8TDX9 2849 aa6.85□□□□□ -1.31
CLIP4-204ENST00000404424 SMIM26A0A096LP01 95 aa6.85□□□□□ -1.31
CLIP4-204ENST00000404424 TENM3Q9P273 2699 aa6.84□□□□□ -1.31
CLIP4-204ENST00000404424 HRCT1Q6UXD1 115 aa6.83□□□□□ -1.32
CLIP4-204ENST00000404424 SMIM29Q86T20 159 aa6.83□□□□□ -1.32
CLIP4-204ENST00000404424 DSCR10P59022 87 aa6.82□□□□□ -1.32
CLIP4-204ENST00000404424 LCE6AA0A183 80 aa6.81□□□□□ -1.32
CLIP4-204ENST00000404424 C16orf90A8MZG2 172 aa6.81□□□□□ -1.32
CLIP4-204ENST00000404424 LINC00476Q8WZB0 136 aa6.81□□□□□ -1.32
CLIP4-204ENST00000404424 CNBPP62633 177 aaKnown RBP6.81□□□□□ -1.32
CLIP4-204ENST00000404424 HIGD2AQ9BW72 106 aa6.8□□□□□ -1.32
CLIP4-204ENST00000404424 FAM30AQ9NZY2 134 aa6.79□□□□□ -1.32
CLIP4-204ENST00000404424 F8P00451 2351 aa6.79□□□□□ -1.32
CLIP4-204ENST00000404424 IGLV8-61A0A075B6I0 122 aa6.79□□□□□ -1.32
CLIP4-204ENST00000404424 A0A096LNI7 61 aa6.78□□□□□ -1.32
CLIP4-204ENST00000404424 K7EIL1 84 aa6.78□□□□□ -1.32
CLIP4-204ENST00000404424 K7EQZ3 153 aa6.78□□□□□ -1.32
CLIP4-204ENST00000404424 PRB2P02812 416 aaPredicted RBP6.78□□□□□ -1.32
CLIP4-204ENST00000404424 IGFL1Q6UW32 110 aa6.78□□□□□ -1.32
CLIP4-204ENST00000404424 FP248Q71RG6 208 aaPredicted RBP6.78□□□□□ -1.32
CLIP4-204ENST00000404424 HUWE1Q7Z6Z7 4374 aaKnown RBP6.78□□□□□ -1.32
CLIP4-204ENST00000404424 A0A1W2PNN7 141 aa6.76□□□□□ -1.33
CLIP4-204ENST00000404424 HCG22E2RYF7 251 aa6.76□□□□□ -1.33
CLIP4-204ENST00000404424 IGKV2-24A0A0C4DH68 120 aa6.75□□□□□ -1.33
CLIP4-204ENST00000404424 PSCAO43653 123 aa6.75□□□□□ -1.33
CLIP4-204ENST00000404424 PRLHP81277 87 aa6.75□□□□□ -1.33
CLIP4-204ENST00000404424 C14orf177Q52M58 125 aa6.75□□□□□ -1.33
CLIP4-204ENST00000404424 KRTAP1-5Q9BYS1 174 aa6.74□□□□□ -1.33
CLIP4-204ENST00000404424 ZCCHC13Q8WW36 166 aaKnown RBP6.74□□□□□ -1.33
CLIP4-204ENST00000404424 FLNBO75369 2602 aaKnown RBP6.73□□□□□ -1.33
CLIP4-204ENST00000404424 H0Y9J4 135 aa6.73□□□□□ -1.33
CLIP4-204ENST00000404424 UBE2AP49459 152 aa6.73□□□□□ -1.33
CLIP4-204ENST00000404424 STAB1Q9NY15 2570 aa6.72□□□□□ -1.33
CLIP4-204ENST00000404424 FBN1P35555 2871 aaKnown RBP6.72□□□□□ -1.33
CLIP4-204ENST00000404424 A0A087WSZ3 146 aa6.72□□□□□ -1.33
CLIP4-204ENST00000404424 SPRR1BP22528 89 aa6.72□□□□□ -1.33
CLIP4-204ENST00000404424 LINC00474Q9P2X8 69 aa6.72□□□□□ -1.33
CLIP4-204ENST00000404424 PKIGQ9Y2B9 76 aa6.72□□□□□ -1.33
CLIP4-204ENST00000404424 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.71□□□□□ -1.33
CLIP4-204ENST00000404424 UBE2DNLQ8IWF7 75 aa6.71□□□□□ -1.33
CLIP4-204ENST00000404424 A0A0G2JQZ4 141 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 167.2 ms