RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 ORAOV1Q8WV07 137 aa2.66□□□□□ -1.98
HMGB3P19-201ENST00000403971 KMT2CQ8NEZ4 4911 aaKnown RBP2.66□□□□□ -1.98
HMGB3P19-201ENST00000403971 HYDINQ4G0P3 5121 aa2.65□□□□□ -1.98
HMGB3P19-201ENST00000403971 DNAH5Q8TE73 4624 aa2.65□□□□□ -1.98
HMGB3P19-201ENST00000403971 MYMXA0A1B0GTQ4 84 aa2.65□□□□□ -1.99
HMGB3P19-201ENST00000403971 A8MUU9 505 aa2.65□□□□□ -1.99
HMGB3P19-201ENST00000403971 LINC00587B1AMM8 73 aa2.65□□□□□ -1.99
HMGB3P19-201ENST00000403971 M0R2N4 97 aa2.65□□□□□ -1.99
HMGB3P19-201ENST00000403971 NDUFA1O15239 70 aa2.65□□□□□ -1.99
HMGB3P19-201ENST00000403971 PSCAO43653 123 aa2.65□□□□□ -1.99
HMGB3P19-201ENST00000403971 SPAG11BQ08648 103 aa2.65□□□□□ -1.99
HMGB3P19-201ENST00000403971 C1orf134Q5TEV5 83 aa2.65□□□□□ -1.99
HMGB3P19-201ENST00000403971 ZNF625Q96I27 306 aaPredicted RBP2.65□□□□□ -1.99
HMGB3P19-201ENST00000403971 UQCR10Q9UDW1 63 aa2.65□□□□□ -1.99
HMGB3P19-201ENST00000403971 NDUFA12Q9UI09 145 aa2.65□□□□□ -1.99
HMGB3P19-201ENST00000403971 DNAH11Q96DT5 4516 aa2.64□□□□□ -1.99
HMGB3P19-201ENST00000403971 FRAS1Q86XX4 4008 aa2.64□□□□□ -1.99
HMGB3P19-201ENST00000403971 TRBV30A0A0K0K1B3 111 aa2.64□□□□□ -1.99
HMGB3P19-201ENST00000403971 ZNF815PA8K554 130 aa2.64□□□□□ -1.99
HMGB3P19-201ENST00000403971 TSTD3H0UI37 97 aa2.64□□□□□ -1.99
HMGB3P19-201ENST00000403971 TIMM17BO60830 172 aa2.64□□□□□ -1.99
HMGB3P19-201ENST00000403971 PFN2P35080 140 aa2.64□□□□□ -1.99
HMGB3P19-201ENST00000403971 TSPEAR-AS2P59090 65 aa2.64□□□□□ -1.99
HMGB3P19-201ENST00000403971 CKS1BP61024 79 aa2.64□□□□□ -1.99
HMGB3P19-201ENST00000403971 CNBPP62633 177 aaKnown RBP2.64□□□□□ -1.99
HMGB3P19-201ENST00000403971 COX17Q14061 63 aa2.64□□□□□ -1.99
HMGB3P19-201ENST00000403971 C14orf144Q96I85 54 aa2.64□□□□□ -1.99
HMGB3P19-201ENST00000403971 MIEN1Q9BRT3 115 aa2.64□□□□□ -1.99
HMGB3P19-201ENST00000403971 TOMM7Q9P0U1 55 aa2.64□□□□□ -1.99
HMGB3P19-201ENST00000403971 HIGD1BQ9P298 99 aa2.64□□□□□ -1.99
HMGB3P19-201ENST00000403971 FAT2Q9NYQ8 4349 aa2.64□□□□□ -1.99
HMGB3P19-201ENST00000403971 A0A087WTM6 91 aa2.63□□□□□ -1.99
HMGB3P19-201ENST00000403971 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.63□□□□□ -1.99
HMGB3P19-201ENST00000403971 CIRBPQ14011 172 aaKnown RBP2.63□□□□□ -1.99
HMGB3P19-201ENST00000403971 SCGB1D4Q6XE38 83 aa2.63□□□□□ -1.99
HMGB3P19-201ENST00000403971 SPANXB1Q9NS25 103 aaPredicted RBP2.63□□□□□ -1.99
HMGB3P19-201ENST00000403971 PKIGQ9Y2B9 76 aa2.63□□□□□ -1.99
HMGB3P19-201ENST00000403971 RYR2Q92736 4967 aa2.63□□□□□ -1.99
HMGB3P19-201ENST00000403971 DNAH8Q96JB1 4490 aa2.62□□□□□ -1.99
HMGB3P19-201ENST00000403971 LOC107984156A0A0G2JMH3 177 aa2.62□□□□□ -1.99
HMGB3P19-201ENST00000403971 TMEM238C9JI98 176 aa2.62□□□□□ -1.99
HMGB3P19-201ENST00000403971 WFDC2Q14508 124 aa2.62□□□□□ -1.99
HMGB3P19-201ENST00000403971 TAL2Q16559 108 aa2.62□□□□□ -1.99
HMGB3P19-201ENST00000403971 C2orf82Q6UX34 121 aa2.62□□□□□ -1.99
HMGB3P19-201ENST00000403971 UNQ6190/PRO20217Q6UXQ8 127 aa2.62□□□□□ -1.99
HMGB3P19-201ENST00000403971 Q6ZRU5 148 aa2.62□□□□□ -1.99
HMGB3P19-201ENST00000403971 LINC00336Q6ZUF6 198 aa2.62□□□□□ -1.99
HMGB3P19-201ENST00000403971 C2orf91Q6ZV80 131 aa2.62□□□□□ -1.99
HMGB3P19-201ENST00000403971 ARL17AQ8IVW1 177 aa2.62□□□□□ -1.99
HMGB3P19-201ENST00000403971 Q8N814 137 aa2.62□□□□□ -1.99
HMGB3P19-201ENST00000403971 C9orf163Q8N9P6 203 aa2.62□□□□□ -1.99
HMGB3P19-201ENST00000403971 CARD19Q96LW7 228 aa2.62□□□□□ -1.99
HMGB3P19-201ENST00000403971 TTTY13Q9BZ97 58 aa2.62□□□□□ -1.99
HMGB3P19-201ENST00000403971 PRO1933Q9H354 126 aa2.62□□□□□ -1.99
HMGB3P19-201ENST00000403971 C6orf48Q9UBA6 75 aa2.62□□□□□ -1.99
HMGB3P19-201ENST00000403971 TP73-AS1Q9UF72 201 aa2.62□□□□□ -1.99
HMGB3P19-201ENST00000403971 ERG28Q9UKR5 140 aa2.62□□□□□ -1.99
HMGB3P19-201ENST00000403971 CBY1Q9Y3M2 126 aa2.62□□□□□ -1.99
HMGB3P19-201ENST00000403971 LECT2O14960 151 aa2.61□□□□□ -1.99
HMGB3P19-201ENST00000403971 IFITM1P13164 125 aa2.61□□□□□ -1.99
HMGB3P19-201ENST00000403971 KRTAP5-9P26371 169 aa2.61□□□□□ -1.99
HMGB3P19-201ENST00000403971 MEIG1Q5JSS6 88 aa2.61□□□□□ -1.99
HMGB3P19-201ENST00000403971 COPS9Q8WXC6 57 aa2.61□□□□□ -1.99
HMGB3P19-201ENST00000403971 LINC00526Q96FQ7 95 aa2.61□□□□□ -1.99
HMGB3P19-201ENST00000403971 SPANXDQ9BXN6 97 aa2.61□□□□□ -1.99
HMGB3P19-201ENST00000403971 SPANXCQ9NY87 97 aa2.61□□□□□ -1.99
HMGB3P19-201ENST00000403971 PKD1P98161 4303 aa2.61□□□□□ -1.99
HMGB3P19-201ENST00000403971 HECTD4Q9Y4D8 3996 aa2.6□□□□□ -1.99
HMGB3P19-201ENST00000403971 LOC107984640A0A0U1RRK4 108 aa2.6□□□□□ -1.99
HMGB3P19-201ENST00000403971 SMIM13P0DJ93 91 aa2.6□□□□□ -1.99
HMGB3P19-201ENST00000403971 DDTP30046 118 aa2.6□□□□□ -1.99
HMGB3P19-201ENST00000403971 LINC00158P58513 81 aa2.6□□□□□ -1.99
HMGB3P19-201ENST00000403971 HSD52Q0P140 79 aa2.6□□□□□ -1.99
HMGB3P19-201ENST00000403971 MIR7-3HGQ8N6C7 128 aa2.6□□□□□ -1.99
HMGB3P19-201ENST00000403971 LINC00308Q8TCZ7 52 aa2.6□□□□□ -1.99
HMGB3P19-201ENST00000403971 RYR3Q15413 4870 aa2.6□□□□□ -1.99
HMGB3P19-201ENST00000403971 DYNC1H1Q14204 4646 aaKnown RBP2.6□□□□□ -1.99
HMGB3P19-201ENST00000403971 LRP1BQ9NZR2 4599 aa2.6□□□□□ -1.99
HMGB3P19-201ENST00000403971 C16orf90A8MZG2 172 aa2.59□□□□□ -1.99
HMGB3P19-201ENST00000403971 M0R143 59 aa2.59□□□□□ -1.99
HMGB3P19-201ENST00000403971 NDUFC2O95298 119 aa2.59□□□□□ -1.99
HMGB3P19-201ENST00000403971 C9orf116Q5BN46 136 aaPredicted RBP2.59□□□□□ -1.99
HMGB3P19-201ENST00000403971 SDIM1Q6ZPB5 146 aa2.59□□□□□ -1.99
HMGB3P19-201ENST00000403971 SND1-IT1Q9HBX3 110 aa2.59□□□□□ -1.99
HMGB3P19-201ENST00000403971 LINC00474Q9P2X8 69 aa2.59□□□□□ -1.99
HMGB3P19-201ENST00000403971 CTAG1AP78358 180 aa2.58□□□□□ -2
HMGB3P19-201ENST00000403971 SOSTDC1Q6X4U4 206 aa2.58□□□□□ -2
HMGB3P19-201ENST00000403971 MUSTN1Q8IVN3 82 aa2.58□□□□□ -2
HMGB3P19-201ENST00000403971 DAND5Q8N907 189 aa2.58□□□□□ -2
HMGB3P19-201ENST00000403971 SPANXA2-OT1Q8N9U9 137 aa2.58□□□□□ -2
HMGB3P19-201ENST00000403971 ST20-AS1Q8NBB2 130 aa2.58□□□□□ -2
HMGB3P19-201ENST00000403971 A0A0B4J2C4 111 aa2.57□□□□□ -2
HMGB3P19-201ENST00000403971 TRBV10-2A0A0K0K1G8 114 aa2.57□□□□□ -2
HMGB3P19-201ENST00000403971 FXYD2P54710 66 aa2.57□□□□□ -2
HMGB3P19-201ENST00000403971 RPL18AQ02543 176 aaKnown RBP2.57□□□□□ -2
HMGB3P19-201ENST00000403971 BVES-AS1Q5T3Y7 98 aa2.57□□□□□ -2
HMGB3P19-201ENST00000403971 KRTAP4-3Q9BYR4 195 aa2.57□□□□□ -2
HMGB3P19-201ENST00000403971 XAGE1AQ9HD64 81 aa2.57□□□□□ -2
HMGB3P19-201ENST00000403971 A0A096LNI7 61 aa2.56□□□□□ -2
HMGB3P19-201ENST00000403971 TRAV13-2A0A0B4J235 113 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms