RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 LCE2BO14633 110 aa9.33□□□□□ -0.92
UFD1-202ENST00000399523 FABP9Q0Z7S8 132 aa9.33□□□□□ -0.92
UFD1-202ENST00000399523 MYMXA0A1B0GTQ4 84 aa9.32□□□□□ -0.92
UFD1-202ENST00000399523 H7C2G1 150 aa9.32□□□□□ -0.92
UFD1-202ENST00000399523 COX19Q49B96 90 aa9.31□□□□□ -0.92
UFD1-202ENST00000399523 NDUFC2O95298 119 aa9.3□□□□□ -0.92
UFD1-202ENST00000399523 PRO1933Q9H354 126 aa9.3□□□□□ -0.92
UFD1-202ENST00000399523 TRAV12-1A0A0B4J245 112 aa9.28□□□□□ -0.92
UFD1-202ENST00000399523 SMIM29Q86T20 159 aa9.28□□□□□ -0.92
UFD1-202ENST00000399523 C18orf32Q8TCD1 76 aa9.28□□□□□ -0.92
UFD1-202ENST00000399523 MT2AP02795 61 aa9.27□□□□□ -0.93
UFD1-202ENST00000399523 HINT1P49773 126 aaPredicted RBP9.27□□□□□ -0.93
UFD1-202ENST00000399523 SEC11CQ9BY50 192 aa9.27□□□□□ -0.93
UFD1-202ENST00000399523 S100PP25815 95 aa9.26□□□□□ -0.93
UFD1-202ENST00000399523 MIEN1Q9BRT3 115 aa9.26□□□□□ -0.93
UFD1-202ENST00000399523 DHRS4-AS1Q9P1J3 65 aa9.25□□□□□ -0.93
UFD1-202ENST00000399523 Q1RN00 199 aa9.24□□□□□ -0.93
UFD1-202ENST00000399523 AKR1D1P51857 326 aa9.23□□□□□ -0.93
UFD1-202ENST00000399523 TSPEAR-AS2P59090 65 aa9.23□□□□□ -0.93
UFD1-202ENST00000399523 COMMD7Q86VX2 200 aa9.23□□□□□ -0.93
UFD1-202ENST00000399523 RPS10P5Q9NQ39 176 aa9.23□□□□□ -0.93
UFD1-202ENST00000399523 CBY1Q9Y3M2 126 aa9.23□□□□□ -0.93
UFD1-202ENST00000399523 C20orf202A1L168 122 aa9.22□□□□□ -0.93
UFD1-202ENST00000399523 IFITM2Q01629 132 aa9.22□□□□□ -0.93
UFD1-202ENST00000399523 ATP11AUNQ6ZP68 121 aa9.22□□□□□ -0.93
UFD1-202ENST00000399523 KRTAP9-3Q9BYQ3 159 aa9.22□□□□□ -0.93
UFD1-202ENST00000399523 IFI27L1Q96BM0 104 aa9.21□□□□□ -0.94
UFD1-202ENST00000399523 MT1FP04733 61 aa9.2□□□□□ -0.94
UFD1-202ENST00000399523 EIF4EBP3O60516 100 aaPredicted RBP9.19□□□□□ -0.94
UFD1-202ENST00000399523 SOSTDC1Q6X4U4 206 aa9.19□□□□□ -0.94
UFD1-202ENST00000399523 Q75L30 129 aa9.19□□□□□ -0.94
UFD1-202ENST00000399523 LEPROTO15243 131 aa9.18□□□□□ -0.94
UFD1-202ENST00000399523 TAL2Q16559 108 aa9.18□□□□□ -0.94
UFD1-202ENST00000399523 A0A0G2JQZ4 141 aa9.17□□□□□ -0.94
UFD1-202ENST00000399523 TEX49A0A1B0GTD5 131 aa9.17□□□□□ -0.94
UFD1-202ENST00000399523 C10orf91Q5T1B1 145 aa9.16□□□□□ -0.94
UFD1-202ENST00000399523 DEFB105AQ8NG35 78 aa9.16□□□□□ -0.94
UFD1-202ENST00000399523 LINC00846Q9NV44 126 aa9.16□□□□□ -0.94
UFD1-202ENST00000399523 TCL1BO95988 128 aa9.15□□□□□ -0.94
UFD1-202ENST00000399523 J3QQQ9 107 aa9.14□□□□□ -0.95
UFD1-202ENST00000399523 RHEBQ15382 184 aa9.14□□□□□ -0.95
UFD1-202ENST00000399523 TRAPPC1Q9Y5R8 145 aa9.14□□□□□ -0.95
UFD1-202ENST00000399523 NMUP48645 174 aa9.13□□□□□ -0.95
UFD1-202ENST00000399523 ELOF1P60002 83 aaKnown RBP9.13□□□□□ -0.95
UFD1-202ENST00000399523 NPC2P61916 151 aa9.13□□□□□ -0.95
UFD1-202ENST00000399523 KRTAP6-3Q3LI67 103 aa9.13□□□□□ -0.95
UFD1-202ENST00000399523 KRTAP19-6Q3LI70 58 aa9.12□□□□□ -0.95
UFD1-202ENST00000399523 ADAMTSL4-AS1Q5T5F5 129 aa9.12□□□□□ -0.95
UFD1-202ENST00000399523 TMEM218A2RU14 115 aa9.11□□□□□ -0.95
UFD1-202ENST00000399523 KRTAP10-10P60014 251 aa9.11□□□□□ -0.95
UFD1-202ENST00000399523 COX7BP24311 80 aa9.1□□□□□ -0.95
UFD1-202ENST00000399523 OR13C6PQ8NH95 151 aa9.1□□□□□ -0.95
UFD1-202ENST00000399523 OBSCN-AS1Q96MR7 158 aa9.1□□□□□ -0.95
UFD1-202ENST00000399523 CHCHD1Q96BP2 118 aaKnown RBP9.09□□□□□ -0.95
UFD1-202ENST00000399523 PCP2Q8IVA1 136 aa9.08□□□□□ -0.96
UFD1-202ENST00000399523 IGLV5-48A0A075B6I7 105 aa9.07□□□□□ -0.96
UFD1-202ENST00000399523 TRBV20-1A0A075B6N2 111 aa9.07□□□□□ -0.96
UFD1-202ENST00000399523 LGALS3P17931 250 aaKnown RBP9.07□□□□□ -0.96
UFD1-202ENST00000399523 SPANXCQ9NY87 97 aa9.07□□□□□ -0.96
UFD1-202ENST00000399523 C6orf99Q4VX62 202 aa9.06□□□□□ -0.96
UFD1-202ENST00000399523 UQCC3Q6UW78 93 aa9.06□□□□□ -0.96
UFD1-202ENST00000399523 A0A0J9YXY3 114 aa9.05□□□□□ -0.96
UFD1-202ENST00000399523 SPANXDQ9BXN6 97 aa9.05□□□□□ -0.96
UFD1-202ENST00000399523 PLNP26678 52 aa9.04□□□□□ -0.96
UFD1-202ENST00000399523 H0Y8G0 127 aa9.03□□□□□ -0.96
UFD1-202ENST00000399523 HERVK_113P61574 105 aa9.03□□□□□ -0.96
UFD1-202ENST00000399523 TRBV7-6A0A0J9YX20 115 aa9.01□□□□□ -0.97
UFD1-202ENST00000399523 LINC00308Q8TCZ7 52 aa9.01□□□□□ -0.97
UFD1-202ENST00000399523 CLLU1Q5K131 121 aa9□□□□□ -0.97
UFD1-202ENST00000399523 Q96NJ1 140 aa8.98□□□□□ -0.97
UFD1-202ENST00000399523 LITAFQ99732 161 aa8.98□□□□□ -0.97
UFD1-202ENST00000399523 DPM2O94777 84 aa8.97□□□□□ -0.97
UFD1-202ENST00000399523 C20orf166-AS1Q96NR2 134 aa8.97□□□□□ -0.97
UFD1-202ENST00000399523 HSBP1O75506 76 aa8.96□□□□□ -0.98
UFD1-202ENST00000399523 NEBP20929 6669 aa8.96□□□□□ -0.98
UFD1-202ENST00000399523 A0A1B0GWB2 263 aa8.95□□□□□ -0.98
UFD1-202ENST00000399523 LINC00518Q8N0U6 118 aa8.95□□□□□ -0.98
UFD1-202ENST00000399523 TRBV7-7A0A0K0K1E9 115 aa8.94□□□□□ -0.98
UFD1-202ENST00000399523 A8MUU9 505 aa8.94□□□□□ -0.98
UFD1-202ENST00000399523 IGKCP01834 107 aa8.93□□□□□ -0.98
UFD1-202ENST00000399523 FAM236DA0A1B0GTK5 79 aa8.92□□□□□ -0.98
UFD1-202ENST00000399523 TIMM17BO60830 172 aa8.92□□□□□ -0.98
UFD1-202ENST00000399523 LEPROTL1O95214 131 aa8.92□□□□□ -0.98
UFD1-202ENST00000399523 FAM236CP0DP71 79 aa8.92□□□□□ -0.98
UFD1-202ENST00000399523 IGFL1Q6UW32 110 aa8.92□□□□□ -0.98
UFD1-202ENST00000399523 PMCHL2Q9BQD1 86 aa8.92□□□□□ -0.98
UFD1-202ENST00000399523 E9PLD3 99 aa8.9□□□□□ -0.98
UFD1-202ENST00000399523 F8WEM9 126 aa8.88□□□□□ -0.99
UFD1-202ENST00000399523 MPLKIPQ8TAP9 179 aa8.88□□□□□ -0.99
UFD1-202ENST00000399523 A4D1N5 150 aa8.87□□□□□ -0.99
UFD1-202ENST00000399523 Q6JHZ5 121 aa8.87□□□□□ -0.99
UFD1-202ENST00000399523 CLEC2BQ92478 149 aa8.87□□□□□ -0.99
UFD1-202ENST00000399523 NHP2Q9NX24 153 aaKnown RBP8.85□□□□□ -0.99
UFD1-202ENST00000399523 HSPB8Q9UJY1 196 aa8.84□□□□□ -0.99
UFD1-202ENST00000399523 KRTAP16-1A8MUX0 517 aa8.83□□□□□ -1
UFD1-202ENST00000399523 LST1O00453 97 aa8.83□□□□□ -1
UFD1-202ENST00000399523 RBM12B-AS1Q9P1G2 102 aa8.83□□□□□ -1
UFD1-202ENST00000399523 LINC00310P59036 64 aa8.82□□□□□ -1
UFD1-202ENST00000399523 SERF1AO75920 110 aa8.81□□□□□ -1
UFD1-202ENST00000399523 HRES1P13985 223 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 1519.5 ms