RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 CCDC179H3BU77 68 aa5.09□□□□□ -1.59
USP47-203ENST00000399455 ANAPC11Q9NYG5 84 aa5.09□□□□□ -1.59
USP47-203ENST00000399455 ABCA12Q86UK0 2595 aa5.09□□□□□ -1.59
USP47-203ENST00000399455 SEC61BP60468 96 aaKnown RBP5.09□□□□□ -1.59
USP47-203ENST00000399455 DOPEY1Q5JWR5 2465 aa5.08□□□□□ -1.6
USP47-203ENST00000399455 PLAC8Q9NZF1 115 aa5.08□□□□□ -1.6
USP47-203ENST00000399455 PRR15Q8IV56 129 aa5.08□□□□□ -1.6
USP47-203ENST00000399455 MUC4Q99102 2169 aa5.07□□□□□ -1.6
USP47-203ENST00000399455 PRR26Q8N8Z3 221 aa5.07□□□□□ -1.6
USP47-203ENST00000399455 F8P00451 2351 aa5.07□□□□□ -1.6
USP47-203ENST00000399455 JMJD1CQ15652 2540 aa5.07□□□□□ -1.6
USP47-203ENST00000399455 C2CD3Q4AC94 2353 aa5.07□□□□□ -1.6
USP47-203ENST00000399455 K7EQZ3 153 aa5.07□□□□□ -1.6
USP47-203ENST00000399455 PSPHP1O15172 72 aa5.06□□□□□ -1.6
USP47-203ENST00000399455 LITAFQ99732 161 aa5.06□□□□□ -1.6
USP47-203ENST00000399455 PKD1L2Q7Z442 2459 aa5.06□□□□□ -1.6
USP47-203ENST00000399455 SPTBN4Q9H254 2564 aa5.06□□□□□ -1.6
USP47-203ENST00000399455 Q8N377 158 aa5.06□□□□□ -1.6
USP47-203ENST00000399455 FN1P02751 2386 aaKnown RBP5.05□□□□□ -1.6
USP47-203ENST00000399455 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.04□□□□□ -1.6
USP47-203ENST00000399455 MYO18BQ8IUG5 2567 aa5.04□□□□□ -1.6
USP47-203ENST00000399455 PMAIP1Q13794 54 aa5.03□□□□□ -1.6
USP47-203ENST00000399455 HRES1P13985 223 aa5.01□□□□□ -1.61
USP47-203ENST00000399455 IGLV8-61A0A075B6I0 122 aa5□□□□□ -1.61
USP47-203ENST00000399455 ERC2-IT1O76042 136 aa5□□□□□ -1.61
USP47-203ENST00000399455 FASNP49327 2511 aaKnown RBP4.98□□□□□ -1.61
USP47-203ENST00000399455 LINC01600Q96MT4 127 aa4.98□□□□□ -1.61
USP47-203ENST00000399455 LINC01554Q52M75 96 aa4.97□□□□□ -1.61
USP47-203ENST00000399455 C1orf195Q5TG92 126 aa4.97□□□□□ -1.61
USP47-203ENST00000399455 COA5Q86WW8 74 aa4.97□□□□□ -1.61
USP47-203ENST00000399455 CHD8Q9HCK8 2581 aa4.96□□□□□ -1.61
USP47-203ENST00000399455 IGLV5-48A0A075B6I7 105 aa4.96□□□□□ -1.62
USP47-203ENST00000399455 CRIPTQ9P021 101 aa4.96□□□□□ -1.62
USP47-203ENST00000399455 FP248Q71RG6 208 aaPredicted RBP4.96□□□□□ -1.62
USP47-203ENST00000399455 CEP295Q9C0D2 2601 aa4.96□□□□□ -1.62
USP47-203ENST00000399455 A8MUN3 132 aa4.95□□□□□ -1.62
USP47-203ENST00000399455 MYO9AB2RTY4 2548 aa4.95□□□□□ -1.62
USP47-203ENST00000399455 UQCR11O14957 56 aa4.95□□□□□ -1.62
USP47-203ENST00000399455 FAM104AQ969W3 186 aa4.94□□□□□ -1.62
USP47-203ENST00000399455 S4R3F8 94 aa4.94□□□□□ -1.62
USP47-203ENST00000399455 KRTAP10-1P60331 282 aa4.94□□□□□ -1.62
USP47-203ENST00000399455 USP9XQ93008 2570 aaPredicted RBP4.93□□□□□ -1.62
USP47-203ENST00000399455 A0A0G2JQZ4 141 aa4.93□□□□□ -1.62
USP47-203ENST00000399455 Q8N1X5 172 aa4.92□□□□□ -1.62
USP47-203ENST00000399455 CSAG1Q6PB30 78 aa4.92□□□□□ -1.62
USP47-203ENST00000399455 SMCPP49901 116 aaPredicted RBP4.91□□□□□ -1.62
USP47-203ENST00000399455 ZCCHC13Q8WW36 166 aaKnown RBP4.91□□□□□ -1.62
USP47-203ENST00000399455 TLN2Q9Y4G6 2542 aa4.91□□□□□ -1.62
USP47-203ENST00000399455 CAMK2N1Q7Z7J9 78 aa4.9□□□□□ -1.62
USP47-203ENST00000399455 SPINT4Q6UDR6 99 aa4.9□□□□□ -1.62
USP47-203ENST00000399455 KRTAP10-2P60368 255 aa4.9□□□□□ -1.63
USP47-203ENST00000399455 MIR22HGQ0VDD5 57 aa4.89□□□□□ -1.63
USP47-203ENST00000399455 PRO0461Q9UI25 63 aa4.89□□□□□ -1.63
USP47-203ENST00000399455 A0A1W2PNM2 257 aa4.88□□□□□ -1.63
USP47-203ENST00000399455 CYP4F30PQ9H0H9 118 aa4.88□□□□□ -1.63
USP47-203ENST00000399455 Q6ZR54 194 aa4.87□□□□□ -1.63
USP47-203ENST00000399455 ACANP16112 2415 aa4.87□□□□□ -1.63
USP47-203ENST00000399455 LINC00483Q53H64 154 aa4.86□□□□□ -1.63
USP47-203ENST00000399455 A0A0D9SG42 100 aa4.86□□□□□ -1.63
USP47-203ENST00000399455 WDR87Q6ZQQ6 2873 aa4.86□□□□□ -1.63
USP47-203ENST00000399455 CDC42SE1Q9NRR8 79 aa4.85□□□□□ -1.63
USP47-203ENST00000399455 SPANXA2-OT1Q8N9U9 137 aa4.85□□□□□ -1.63
USP47-203ENST00000399455 KRTAP1-5Q9BYS1 174 aa4.84□□□□□ -1.63
USP47-203ENST00000399455 EIF4EBP3O60516 100 aaPredicted RBP4.83□□□□□ -1.64
USP47-203ENST00000399455 POLQO75417 2590 aa4.83□□□□□ -1.64
USP47-203ENST00000399455 USP9YO00507 2555 aaPredicted RBP4.82□□□□□ -1.64
USP47-203ENST00000399455 SPRR1AP35321 89 aa4.82□□□□□ -1.64
USP47-203ENST00000399455 MTORP42345 2549 aa4.81□□□□□ -1.64
USP47-203ENST00000399455 SPRR1BP22528 89 aa4.81□□□□□ -1.64
USP47-203ENST00000399455 EPG5Q9HCE0 2579 aa4.79□□□□□ -1.64
USP47-203ENST00000399455 RPS28P62857 69 aaKnown RBP4.79□□□□□ -1.64
USP47-203ENST00000399455 HECTD1Q9ULT8 2610 aa4.79□□□□□ -1.64
USP47-203ENST00000399455 PLAC4Q8WY50 150 aa4.79□□□□□ -1.64
USP47-203ENST00000399455 C4orf26Q17RF5 130 aa4.78□□□□□ -1.64
USP47-203ENST00000399455 SPINK7P58062 85 aa4.77□□□□□ -1.65
USP47-203ENST00000399455 RPS29P62273 56 aaKnown RBP4.77□□□□□ -1.65
USP47-203ENST00000399455 R4GN34 69 aa4.77□□□□□ -1.65
USP47-203ENST00000399455 HELZ2Q9BYK8 2649 aaKnown RBP4.77□□□□□ -1.65
USP47-203ENST00000399455 KLKP1Q107X0 134 aa4.76□□□□□ -1.65
USP47-203ENST00000399455 KRTAP26-1Q6PEX3 210 aa4.75□□□□□ -1.65
USP47-203ENST00000399455 DMAC1Q96GE9 116 aa4.74□□□□□ -1.65
USP47-203ENST00000399455 A0A1B0GU33 70 aa4.74□□□□□ -1.65
USP47-203ENST00000399455 PRO0628Q9UI54 55 aa4.74□□□□□ -1.65
USP47-203ENST00000399455 MMP24-AS1A0A0U1RRL7 71 aa4.73□□□□□ -1.65
USP47-203ENST00000399455 LCA10Q71F78 164 aa4.72□□□□□ -1.65
USP47-203ENST00000399455 Q5W150 140 aa4.71□□□□□ -1.66
USP47-203ENST00000399455 FLNAP21333 2647 aaKnown RBP4.71□□□□□ -1.66
USP47-203ENST00000399455 SETD2Q9BYW2 2564 aaPredicted RBP4.7□□□□□ -1.66
USP47-203ENST00000399455 ITPR3Q14573 2671 aa4.7□□□□□ -1.66
USP47-203ENST00000399455 CENPFP49454 3210 aa4.69□□□□□ -1.66
USP47-203ENST00000399455 LINC00472Q9H8W2 130 aa4.68□□□□□ -1.66
USP47-203ENST00000399455 LUZP6Q538Z0 58 aa4.68□□□□□ -1.66
USP47-203ENST00000399455 Q6ZRN7 208 aaPredicted RBP4.67□□□□□ -1.66
USP47-203ENST00000399455 M0QZ58 72 aa4.66□□□□□ -1.66
USP47-203ENST00000399455 Q1T7F1 81 aa4.65□□□□□ -1.66
USP47-203ENST00000399455 OCR1Q9BZK8 76 aa4.65□□□□□ -1.66
USP47-203ENST00000399455 FLNBO75369 2602 aaKnown RBP4.64□□□□□ -1.67
USP47-203ENST00000399455 SRCAPQ6ZRS2 3230 aa4.64□□□□□ -1.67
USP47-203ENST00000399455 H1FX-AS1Q4G0G2 97 aa4.64□□□□□ -1.67
USP47-203ENST00000399455 PANO1I0J062 215 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms