RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 HIGD1BQ9P298 99 aa10.7□□□□□ -0.7
CTNS-203ENST00000399306 KRTAP4-16G5E9R7 235 aaPredicted RBP10.69□□□□□ -0.7
CTNS-203ENST00000399306 SLC25A34Q6PIV7 304 aa10.69□□□□□ -0.7
CTNS-203ENST00000399306 FAM19A1Q7Z5A9 133 aa10.69□□□□□ -0.7
CTNS-203ENST00000399306 C14orf144Q96I85 54 aa10.67□□□□□ -0.7
CTNS-203ENST00000399306 TRAV23DV6A0A075B6W5 121 aa10.66□□□□□ -0.7
CTNS-203ENST00000399306 ETDCA0A1B0GVM5 59 aa10.66□□□□□ -0.7
CTNS-203ENST00000399306 J3QL48 77 aa10.65□□□□□ -0.7
CTNS-203ENST00000399306 TRAV13-2A0A0B4J235 113 aa10.64□□□□□ -0.71
CTNS-203ENST00000399306 OR13C6PQ8NH95 151 aa10.64□□□□□ -0.71
CTNS-203ENST00000399306 TNXBP22105 4242 aa10.63□□□□□ -0.71
CTNS-203ENST00000399306 ZNF73O43830 326 aaPredicted RBP10.63□□□□□ -0.71
CTNS-203ENST00000399306 KRTAP1-4P0C5Y4 121 aa10.63□□□□□ -0.71
CTNS-203ENST00000399306 PRLHP81277 87 aa10.63□□□□□ -0.71
CTNS-203ENST00000399306 HIST1H4GQ99525 98 aa10.63□□□□□ -0.71
CTNS-203ENST00000399306 B5MCH6 92 aa10.62□□□□□ -0.71
CTNS-203ENST00000399306 TAL2Q16559 108 aa10.62□□□□□ -0.71
CTNS-203ENST00000399306 MT1HL1P0DM35 61 aa10.61□□□□□ -0.71
CTNS-203ENST00000399306 HINT1P49773 126 aaPredicted RBP10.61□□□□□ -0.71
CTNS-203ENST00000399306 KRTAP10-8P60410 259 aa10.6□□□□□ -0.71
CTNS-203ENST00000399306 Q6ZRX8 168 aa10.6□□□□□ -0.71
CTNS-203ENST00000399306 C2orf91Q6ZV80 131 aa10.6□□□□□ -0.71
CTNS-203ENST00000399306 A4D1N5 150 aa10.59□□□□□ -0.71
CTNS-203ENST00000399306 TRBV7-6A0A0J9YX20 115 aa10.58□□□□□ -0.72
CTNS-203ENST00000399306 A6NDN8 102 aa10.57□□□□□ -0.72
CTNS-203ENST00000399306 SMIM6P0DI80 62 aa10.57□□□□□ -0.72
CTNS-203ENST00000399306 RPL13AP40429 203 aaKnown RBP10.57□□□□□ -0.72
CTNS-203ENST00000399306 FAM229BQ4G0N7 80 aa10.57□□□□□ -0.72
CTNS-203ENST00000399306 HIGD2AQ9BW72 106 aa10.57□□□□□ -0.72
CTNS-203ENST00000399306 ZNF706Q9Y5V0 76 aaPredicted RBP10.57□□□□□ -0.72
CTNS-203ENST00000399306 SMCR5Q8TEV8 140 aa10.56□□□□□ -0.72
CTNS-203ENST00000399306 UQCR10Q9UDW1 63 aa10.56□□□□□ -0.72
CTNS-203ENST00000399306 HERC1Q15751 4861 aa10.53□□□□□ -0.72
CTNS-203ENST00000399306 ELOF1P60002 83 aaKnown RBP10.53□□□□□ -0.72
CTNS-203ENST00000399306 C6orf99Q4VX62 202 aa10.53□□□□□ -0.72
CTNS-203ENST00000399306 CEND1Q8N111 149 aa10.53□□□□□ -0.72
CTNS-203ENST00000399306 Q9BRP9 147 aa10.53□□□□□ -0.72
CTNS-203ENST00000399306 DHRS4-AS1Q9P1J3 65 aa10.53□□□□□ -0.72
CTNS-203ENST00000399306 TMEM238LA0A1B0GVL6 79 aa10.52□□□□□ -0.73
CTNS-203ENST00000399306 A0A1B0GWB2 263 aa10.52□□□□□ -0.73
CTNS-203ENST00000399306 A6NJY4 79 aa10.52□□□□□ -0.73
CTNS-203ENST00000399306 CRYGAP11844 174 aa10.52□□□□□ -0.73
CTNS-203ENST00000399306 SPRR4Q96PI1 79 aa10.52□□□□□ -0.73
CTNS-203ENST00000399306 COX7BP24311 80 aa10.51□□□□□ -0.73
CTNS-203ENST00000399306 PRR26Q8N8Z3 221 aa10.51□□□□□ -0.73
CTNS-203ENST00000399306 A0A0B4J2C4 111 aa10.5□□□□□ -0.73
CTNS-203ENST00000399306 LOC105371267A0A1B0GV96 52 aa10.5□□□□□ -0.73
CTNS-203ENST00000399306 HSD52Q0P140 79 aa10.5□□□□□ -0.73
CTNS-203ENST00000399306 SMIM11BQ8TCY0 68 aa10.5□□□□□ -0.73
CTNS-203ENST00000399306 CFC1BP0CG36 223 aa10.48□□□□□ -0.73
CTNS-203ENST00000399306 CFC1P0CG37 223 aa10.48□□□□□ -0.73
CTNS-203ENST00000399306 LINC00483Q53H64 154 aa10.48□□□□□ -0.73
CTNS-203ENST00000399306 A0A087X002 238 aa10.46□□□□□ -0.73
CTNS-203ENST00000399306 ERC2-IT1O76042 136 aa10.46□□□□□ -0.73
CTNS-203ENST00000399306 VAMP3Q15836 100 aa10.46□□□□□ -0.73
CTNS-203ENST00000399306 RAB37Q96AX2 223 aa10.46□□□□□ -0.73
CTNS-203ENST00000399306 NHP2Q9NX24 153 aaKnown RBP10.45□□□□□ -0.74
CTNS-203ENST00000399306 C12orf57Q99622 126 aa10.44□□□□□ -0.74
CTNS-203ENST00000399306 FXYD2P54710 66 aa10.43□□□□□ -0.74
CTNS-203ENST00000399306 BVES-AS1Q5T3Y7 98 aa10.43□□□□□ -0.74
CTNS-203ENST00000399306 CTAG1AP78358 180 aa10.42□□□□□ -0.74
CTNS-203ENST00000399306 KRTAP13-2Q52LG2 175 aa10.42□□□□□ -0.74
CTNS-203ENST00000399306 TYMSOSQ8TAI1 123 aa10.42□□□□□ -0.74
CTNS-203ENST00000399306 ANAPC11Q9NYG5 84 aa10.42□□□□□ -0.74
CTNS-203ENST00000399306 SPRR1BP22528 89 aa10.41□□□□□ -0.74
CTNS-203ENST00000399306 PRO1854Q9UHT4 67 aa10.41□□□□□ -0.74
CTNS-203ENST00000399306 GAGE2AQ6NT46 116 aa10.4□□□□□ -0.74
CTNS-203ENST00000399306 SLC25A20O43772 301 aa10.39□□□□□ -0.75
CTNS-203ENST00000399306 PRO1933Q9H354 126 aa10.38□□□□□ -0.75
CTNS-203ENST00000399306 LINC00575Q6W349 94 aa10.37□□□□□ -0.75
CTNS-203ENST00000399306 TSTD3H0UI37 97 aa10.36□□□□□ -0.75
CTNS-203ENST00000399306 ST20-AS1Q8NBB2 130 aa10.36□□□□□ -0.75
CTNS-203ENST00000399306 IGLV5-48A0A075B6I7 105 aa10.35□□□□□ -0.75
CTNS-203ENST00000399306 H0YGX0 51 aa10.35□□□□□ -0.75
CTNS-203ENST00000399306 TEX49A0A1B0GTD5 131 aa10.34□□□□□ -0.75
CTNS-203ENST00000399306 SSBP3-AS1Q7Z2R9 100 aa10.34□□□□□ -0.75
CTNS-203ENST00000399306 C3orf22Q8N5N4 141 aa10.34□□□□□ -0.75
CTNS-203ENST00000399306 hADV29S1A0JD25 119 aa10.33□□□□□ -0.76
CTNS-203ENST00000399306 H7C2G1 150 aa10.33□□□□□ -0.76
CTNS-203ENST00000399306 M0R143 59 aa10.33□□□□□ -0.76
CTNS-203ENST00000399306 Q1RN00 199 aa10.32□□□□□ -0.76
CTNS-203ENST00000399306 SPAG11AQ6PDA7 123 aa10.32□□□□□ -0.76
CTNS-203ENST00000399306 A0A1B0GX51 115 aa10.31□□□□□ -0.76
CTNS-203ENST00000399306 SNCGO76070 127 aa10.31□□□□□ -0.76
CTNS-203ENST00000399306 LINC00304Q8N9R0 145 aa10.31□□□□□ -0.76
CTNS-203ENST00000399306 LINC01547P58512 204 aaPredicted RBP10.3□□□□□ -0.76
CTNS-203ENST00000399306 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.3□□□□□ -0.76
CTNS-203ENST00000399306 LAMTOR3Q9UHA4 124 aa10.3□□□□□ -0.76
CTNS-203ENST00000399306 HMCN2Q8NDA2 5059 aa10.3□□□□□ -0.76
CTNS-203ENST00000399306 PPDPFLQ8WWR9 84 aa10.29□□□□□ -0.76
CTNS-203ENST00000399306 OCIAD2Q56VL3 154 aa10.27□□□□□ -0.77
CTNS-203ENST00000399306 Q8NBF4 154 aa10.27□□□□□ -0.77
CTNS-203ENST00000399306 IGLV9-49A0A0B4J1Y8 123 aa10.26□□□□□ -0.77
CTNS-203ENST00000399306 K7ERJ3 54 aa10.26□□□□□ -0.77
CTNS-203ENST00000399306 COX6CP09669 75 aa10.26□□□□□ -0.77
CTNS-203ENST00000399306 MOBPQ13875 183 aa10.26□□□□□ -0.77
CTNS-203ENST00000399306 Q6ZQY7 126 aa10.26□□□□□ -0.77
CTNS-203ENST00000399306 TRIAP1O43715 76 aa10.25□□□□□ -0.77
CTNS-203ENST00000399306 Q8N377 158 aa10.25□□□□□ -0.77
CTNS-203ENST00000399306 DEFB105AQ8NG35 78 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms