RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 TRAV7A0A075B6U4 112 aa16.75■□□□□ 0.27
COL13A1-203ENST00000398969 DEFB131BA0A096LNP1 70 aa16.75■□□□□ 0.27
COL13A1-203ENST00000398969 TRAV10A0A0B4J240 114 aa16.75■□□□□ 0.27
COL13A1-203ENST00000398969 FAM19A5Q7Z5A7 132 aaPredicted RBP16.73■□□□□ 0.27
COL13A1-203ENST00000398969 PRB2P02812 416 aaPredicted RBP16.72■□□□□ 0.27
COL13A1-203ENST00000398969 TENM3Q9P273 2699 aa16.72■□□□□ 0.27
COL13A1-203ENST00000398969 SCXQ7RTU7 201 aa16.72■□□□□ 0.27
COL13A1-203ENST00000398969 C11orf45Q8TAV5 145 aa16.7■□□□□ 0.26
COL13A1-203ENST00000398969 KCNQ1DNQ9H478 68 aa16.7■□□□□ 0.26
COL13A1-203ENST00000398969 NBEAL1Q6ZS30 2694 aa16.69■□□□□ 0.26
COL13A1-203ENST00000398969 SERTAD4-AS1Q5TG53 156 aa16.69■□□□□ 0.26
COL13A1-203ENST00000398969 NKAPP1Q8N9T2 125 aa16.68■□□□□ 0.26
COL13A1-203ENST00000398969 C7orf33Q8WU49 177 aa16.67■□□□□ 0.26
COL13A1-203ENST00000398969 DNAH10OSP0CZ25 163 aa16.66■□□□□ 0.26
COL13A1-203ENST00000398969 OXTP01178 125 aa16.66■□□□□ 0.26
COL13A1-203ENST00000398969 K7EIL1 84 aa16.64■□□□□ 0.25
COL13A1-203ENST00000398969 TLX1NBP0CAT3 122 aa16.61■□□□□ 0.25
COL13A1-203ENST00000398969 MDFIQ99750 246 aa16.61■□□□□ 0.25
COL13A1-203ENST00000398969 H7BZZ5 65 aa16.59■□□□□ 0.25
COL13A1-203ENST00000398969 KLKP1Q107X0 134 aa16.59■□□□□ 0.25
COL13A1-203ENST00000398969 Q8N377 158 aa16.59■□□□□ 0.25
COL13A1-203ENST00000398969 TM2D3Q9BRN9 247 aa16.59■□□□□ 0.25
COL13A1-203ENST00000398969 MGAM2Q2M2H8 2515 aa16.59■□□□□ 0.25
COL13A1-203ENST00000398969 DEFB105AQ8NG35 78 aa16.59■□□□□ 0.25
COL13A1-203ENST00000398969 PLA2G2DQ9UNK4 145 aa16.58■□□□□ 0.25
COL13A1-203ENST00000398969 MRAPQ8TCY5 172 aa16.58■□□□□ 0.24
COL13A1-203ENST00000398969 FAM236DA0A1B0GTK5 79 aa16.56■□□□□ 0.24
COL13A1-203ENST00000398969 FAM236CP0DP71 79 aa16.56■□□□□ 0.24
COL13A1-203ENST00000398969 NREPQ16612 68 aa16.54■□□□□ 0.24
COL13A1-203ENST00000398969 IGLV5-48A0A075B6I7 105 aa16.54■□□□□ 0.24
COL13A1-203ENST00000398969 Q6ZRX8 168 aa16.54■□□□□ 0.24
COL13A1-203ENST00000398969 SNURFQ9Y675 71 aa16.54■□□□□ 0.24
COL13A1-203ENST00000398969 FAM168BA1KXE4 195 aa16.53■□□□□ 0.24
COL13A1-203ENST00000398969 RPL37AP8A6NKH3 93 aa16.53■□□□□ 0.24
COL13A1-203ENST00000398969 Q8N9L7 120 aa16.53■□□□□ 0.24
COL13A1-203ENST00000398969 CASC10Q5T4H9 136 aa16.53■□□□□ 0.24
COL13A1-203ENST00000398969 DHRS4-AS1Q9P1J3 65 aa16.53■□□□□ 0.24
COL13A1-203ENST00000398969 LINC00588Q9Y4M8 146 aa16.53■□□□□ 0.24
COL13A1-203ENST00000398969 KRTAP4-16G5E9R7 235 aaPredicted RBP16.52■□□□□ 0.24
COL13A1-203ENST00000398969 C3orf84H3BNL1 204 aa16.52■□□□□ 0.24
COL13A1-203ENST00000398969 IGKV4-1P06312 121 aa16.52■□□□□ 0.23
COL13A1-203ENST00000398969 RMI2Q96E14 147 aa16.52■□□□□ 0.23
COL13A1-203ENST00000398969 IGLV5-37A0A075B6J1 123 aa16.51■□□□□ 0.23
COL13A1-203ENST00000398969 Q9BRP9 147 aa16.51■□□□□ 0.23
COL13A1-203ENST00000398969 IGLV1-50A0A075B6I6 118 aa16.5■□□□□ 0.23
COL13A1-203ENST00000398969 PRYO14603 147 aa16.5■□□□□ 0.23
COL13A1-203ENST00000398969 BPY2O14599 106 aa16.5■□□□□ 0.23
COL13A1-203ENST00000398969 HUWE1Q7Z6Z7 4374 aaKnown RBP16.48■□□□□ 0.23
COL13A1-203ENST00000398969 SPRR1AP35321 89 aa16.48■□□□□ 0.23
COL13A1-203ENST00000398969 KRTAP7-1Q8IUC3 87 aa16.48■□□□□ 0.23
COL13A1-203ENST00000398969 ETDCA0A1B0GVM5 59 aa16.45■□□□□ 0.22
COL13A1-203ENST00000398969 F8WEM9 126 aa16.43■□□□□ 0.22
COL13A1-203ENST00000398969 TNP2Q05952 138 aa16.43■□□□□ 0.22
COL13A1-203ENST00000398969 ST20-AS1Q8NBB2 130 aa16.43■□□□□ 0.22
COL13A1-203ENST00000398969 FUSP35637 526 aaKnown RBP eCLIP16.42■□□□□ 0.22
COL13A1-203ENST00000398969 A0A1W2PNM2 257 aa16.41■□□□□ 0.22
COL13A1-203ENST00000398969 Q5XG85 94 aa16.4■□□□□ 0.22
COL13A1-203ENST00000398969 SERP1Q9Y6X1 66 aa16.4■□□□□ 0.22
COL13A1-203ENST00000398969 EPM2AB3EWF7 344 aa16.39■□□□□ 0.21
COL13A1-203ENST00000398969 A0A1B0GW54 56 aa16.39■□□□□ 0.21
COL13A1-203ENST00000398969 MRPL55Q7Z7F7 128 aaKnown RBP16.39■□□□□ 0.21
COL13A1-203ENST00000398969 C1orf137Q5JT78 98 aa16.38■□□□□ 0.21
COL13A1-203ENST00000398969 NDUFC1O43677 76 aa16.38■□□□□ 0.21
COL13A1-203ENST00000398969 ERC2-IT1O76042 136 aa16.38■□□□□ 0.21
COL13A1-203ENST00000398969 DNAH1Q9P2D7 4330 aa16.37■□□□□ 0.21
COL13A1-203ENST00000398969 TMEM254Q8TBM7 123 aa16.37■□□□□ 0.21
COL13A1-203ENST00000398969 OCR1Q9BZK8 76 aa16.36■□□□□ 0.21
COL13A1-203ENST00000398969 C5orf47Q569G3 176 aa16.36■□□□□ 0.21
COL13A1-203ENST00000398969 Q8NBF4 154 aa16.34■□□□□ 0.21
COL13A1-203ENST00000398969 C4orf26Q17RF5 130 aa16.33■□□□□ 0.2
COL13A1-203ENST00000398969 UBE2BP63146 152 aa16.31■□□□□ 0.2
COL13A1-203ENST00000398969 SPRR4Q96PI1 79 aa16.29■□□□□ 0.2
COL13A1-203ENST00000398969 REG3GQ6UW15 175 aa16.28■□□□□ 0.2
COL13A1-203ENST00000398969 DNAH9Q9NYC9 4486 aa16.26■□□□□ 0.19
COL13A1-203ENST00000398969 A0A0U1RQV1 116 aa16.25■□□□□ 0.19
COL13A1-203ENST00000398969 COL7A1Q02388 2944 aa16.25■□□□□ 0.19
COL13A1-203ENST00000398969 B9D2Q9BPU9 175 aa16.24■□□□□ 0.19
COL13A1-203ENST00000398969 ATP5EP56381 51 aaPredicted RBP16.24■□□□□ 0.19
COL13A1-203ENST00000398969 HRCT1Q6UXD1 115 aa16.23■□□□□ 0.19
COL13A1-203ENST00000398969 SMIM29Q86T20 159 aa16.23■□□□□ 0.19
COL13A1-203ENST00000398969 STAB2Q8WWQ8 2551 aa16.23■□□□□ 0.19
COL13A1-203ENST00000398969 DSCR10P59022 87 aa16.19■□□□□ 0.18
COL13A1-203ENST00000398969 LINC00476Q8WZB0 136 aa16.18■□□□□ 0.18
COL13A1-203ENST00000398969 A0A096LNI7 61 aa16.17■□□□□ 0.18
COL13A1-203ENST00000398969 FAM30AQ9NZY2 134 aa16.16■□□□□ 0.18
COL13A1-203ENST00000398969 HIGD2AQ9BW72 106 aa16.16■□□□□ 0.18
COL13A1-203ENST00000398969 KRTAP1-5Q9BYS1 174 aa16.15■□□□□ 0.18
COL13A1-203ENST00000398969 C16orf90A8MZG2 172 aa16.14■□□□□ 0.17
COL13A1-203ENST00000398969 SMIM26A0A096LP01 95 aa16.13■□□□□ 0.17
COL13A1-203ENST00000398969 IGKV2-24A0A0C4DH68 120 aa16.13■□□□□ 0.17
COL13A1-203ENST00000398969 K7EQZ3 153 aa16.13■□□□□ 0.17
COL13A1-203ENST00000398969 A0A1W2PNN7 141 aa16.12■□□□□ 0.17
COL13A1-203ENST00000398969 PRLHP81277 87 aa16.12■□□□□ 0.17
COL13A1-203ENST00000398969 A0A0G2JQZ4 141 aa16.11■□□□□ 0.17
COL13A1-203ENST00000398969 CNBPP62633 177 aaKnown RBP16.11■□□□□ 0.17
COL13A1-203ENST00000398969 IGFL1Q6UW32 110 aa16.11■□□□□ 0.17
COL13A1-203ENST00000398969 FP248Q71RG6 208 aaPredicted RBP16.11■□□□□ 0.17
COL13A1-203ENST00000398969 LCE6AA0A183 80 aa16.1■□□□□ 0.17
COL13A1-203ENST00000398969 PSCAO43653 123 aa16.05■□□□□ 0.16
COL13A1-203ENST00000398969 IGLV8-61A0A075B6I0 122 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms