RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 ELOF1P60002 83 aaKnown RBP5.42□□□□□ -1.54
PTPRD-204ENST00000397606 MXRA5Q9NR99 2828 aa5.42□□□□□ -1.54
PTPRD-204ENST00000397606 IGLV6-57P01721 117 aa5.41□□□□□ -1.54
PTPRD-204ENST00000397606 Q6ZRX8 168 aa5.41□□□□□ -1.54
PTPRD-204ENST00000397606 FAM104AQ969W3 186 aa5.41□□□□□ -1.54
PTPRD-204ENST00000397606 FAM168BA1KXE4 195 aa5.4□□□□□ -1.54
PTPRD-204ENST00000397606 SERTAD4-AS1Q5TG53 156 aa5.4□□□□□ -1.54
PTPRD-204ENST00000397606 ATP5EP2Q5VTU8 51 aa5.4□□□□□ -1.54
PTPRD-204ENST00000397606 HRCT1Q6UXD1 115 aa5.4□□□□□ -1.54
PTPRD-204ENST00000397606 BCE1O60756 84 aa5.4□□□□□ -1.54
PTPRD-204ENST00000397606 PLA2G2DQ9UNK4 145 aa5.4□□□□□ -1.55
PTPRD-204ENST00000397606 CIRBP-AS1Q8TBR5 109 aa5.4□□□□□ -1.55
PTPRD-204ENST00000397606 C9orf129Q5T035 196 aaKnown RBP5.39□□□□□ -1.55
PTPRD-204ENST00000397606 IGLV1-50A0A075B6I6 118 aa5.39□□□□□ -1.55
PTPRD-204ENST00000397606 KCNQ1DNQ9H478 68 aa5.39□□□□□ -1.55
PTPRD-204ENST00000397606 EPM2AB3EWF7 344 aa5.38□□□□□ -1.55
PTPRD-204ENST00000397606 SPINK6Q6UWN8 80 aa5.38□□□□□ -1.55
PTPRD-204ENST00000397606 TNP2Q05952 138 aa5.38□□□□□ -1.55
PTPRD-204ENST00000397606 EIF4EBP3O60516 100 aaPredicted RBP5.37□□□□□ -1.55
PTPRD-204ENST00000397606 PLA2G1BP04054 148 aaKnown RBP5.37□□□□□ -1.55
PTPRD-204ENST00000397606 OTOGQ6ZRI0 2925 aa5.37□□□□□ -1.55
PTPRD-204ENST00000397606 SMG1Q96Q15 3661 aaKnown RBP5.35□□□□□ -1.55
PTPRD-204ENST00000397606 FAM218AQ96MZ4 157 aa5.35□□□□□ -1.55
PTPRD-204ENST00000397606 RPL37AP61513 92 aaKnown RBP5.35□□□□□ -1.55
PTPRD-204ENST00000397606 FAM240AA0A1B0GVK7 77 aa5.35□□□□□ -1.55
PTPRD-204ENST00000397606 SCXQ7RTU7 201 aa5.35□□□□□ -1.55
PTPRD-204ENST00000397606 CRYGAP11844 174 aa5.34□□□□□ -1.55
PTPRD-204ENST00000397606 ATOX1O00244 68 aa5.34□□□□□ -1.55
PTPRD-204ENST00000397606 MP68P56378 58 aa5.34□□□□□ -1.55
PTPRD-204ENST00000397606 SMIM20Q8N5G0 67 aa5.34□□□□□ -1.55
PTPRD-204ENST00000397606 FAM236AA0A1B0GUQ0 79 aa5.33□□□□□ -1.56
PTPRD-204ENST00000397606 FAM236BA0A1B0GV22 79 aa5.33□□□□□ -1.56
PTPRD-204ENST00000397606 A0A1W2PNN7 141 aa5.33□□□□□ -1.56
PTPRD-204ENST00000397606 SDIM1Q6ZPB5 146 aa5.33□□□□□ -1.56
PTPRD-204ENST00000397606 A0A087WSZ3 146 aa5.33□□□□□ -1.56
PTPRD-204ENST00000397606 LCE6AA0A183 80 aa5.33□□□□□ -1.56
PTPRD-204ENST00000397606 LIMD2Q9BT23 127 aa5.33□□□□□ -1.56
PTPRD-204ENST00000397606 KRTAP1-5Q9BYS1 174 aa5.33□□□□□ -1.56
PTPRD-204ENST00000397606 LINC00528Q8N1L1 170 aa5.33□□□□□ -1.56
PTPRD-204ENST00000397606 XGP55808 180 aa5.32□□□□□ -1.56
PTPRD-204ENST00000397606 MOBPQ13875 183 aa5.32□□□□□ -1.56
PTPRD-204ENST00000397606 IGLV5-37A0A075B6J1 123 aa5.32□□□□□ -1.56
PTPRD-204ENST00000397606 B5MCH6 92 aa5.32□□□□□ -1.56
PTPRD-204ENST00000397606 ZNF861PO60384 105 aa5.32□□□□□ -1.56
PTPRD-204ENST00000397606 ST20-AS1Q8NBB2 130 aa5.31□□□□□ -1.56
PTPRD-204ENST00000397606 Q8NBF4 154 aa5.31□□□□□ -1.56
PTPRD-204ENST00000397606 STAB2Q8WWQ8 2551 aa5.3□□□□□ -1.56
PTPRD-204ENST00000397606 J3KT08 172 aa5.3□□□□□ -1.56
PTPRD-204ENST00000397606 KRTAP26-1Q6PEX3 210 aa5.3□□□□□ -1.56
PTPRD-204ENST00000397606 C3orf22Q8N5N4 141 aa5.3□□□□□ -1.56
PTPRD-204ENST00000397606 A0A1B0GW54 56 aa5.3□□□□□ -1.56
PTPRD-204ENST00000397606 IMUPQ9GZP8 106 aa5.29□□□□□ -1.56
PTPRD-204ENST00000397606 TYMSOSQ8TAI1 123 aa5.29□□□□□ -1.56
PTPRD-204ENST00000397606 PSORS1C2Q9UIG4 136 aa5.29□□□□□ -1.56
PTPRD-204ENST00000397606 MT-ATP8P03928 68 aa5.29□□□□□ -1.56
PTPRD-204ENST00000397606 IGKV4-1P06312 121 aa5.28□□□□□ -1.56
PTPRD-204ENST00000397606 SMR3BP02814 79 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-204ENST00000397606 IGLV7-43P04211 117 aa5.28□□□□□ -1.56
PTPRD-204ENST00000397606 Q6ZR54 194 aa5.27□□□□□ -1.57
PTPRD-204ENST00000397606 SPACA4Q8TDM5 124 aa5.27□□□□□ -1.57
PTPRD-204ENST00000397606 WFDC13Q8IUB5 93 aa5.27□□□□□ -1.57
PTPRD-204ENST00000397606 PRO0461Q9UI25 63 aa5.27□□□□□ -1.57
PTPRD-204ENST00000397606 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.27□□□□□ -1.57
PTPRD-204ENST00000397606 SMCPP49901 116 aaPredicted RBP5.26□□□□□ -1.57
PTPRD-204ENST00000397606 Q6ZVQ6 151 aa5.26□□□□□ -1.57
PTPRD-204ENST00000397606 LOC110117498A0A087WWA1 95 aa5.25□□□□□ -1.57
PTPRD-204ENST00000397606 LINC00846Q9NV44 126 aa5.25□□□□□ -1.57
PTPRD-204ENST00000397606 BSNQ9UPA5 3926 aa5.24□□□□□ -1.57
PTPRD-204ENST00000397606 IGHV6-1A0A0B4J1U7 121 aa5.24□□□□□ -1.57
PTPRD-204ENST00000397606 Q6ZQT0 140 aa5.24□□□□□ -1.57
PTPRD-204ENST00000397606 PLAC8Q9NZF1 115 aa5.24□□□□□ -1.57
PTPRD-204ENST00000397606 SSBP3-AS1Q7Z2R9 100 aa5.23□□□□□ -1.57
PTPRD-204ENST00000397606 TRBV7-4A0A0J9YYF1 115 aa5.23□□□□□ -1.57
PTPRD-204ENST00000397606 TENM1Q9UKZ4 2725 aa5.22□□□□□ -1.57
PTPRD-204ENST00000397606 NBPF19A0A087WUL8 3843 aa5.22□□□□□ -1.57
PTPRD-204ENST00000397606 Q8N377 158 aa5.22□□□□□ -1.57
PTPRD-204ENST00000397606 DEFB116Q30KQ4 102 aa5.22□□□□□ -1.57
PTPRD-204ENST00000397606 LINC01547P58512 204 aaPredicted RBP5.21□□□□□ -1.58
PTPRD-204ENST00000397606 SPRR4Q96PI1 79 aa5.21□□□□□ -1.58
PTPRD-204ENST00000397606 CXCL6P80162 114 aa5.21□□□□□ -1.58
PTPRD-204ENST00000397606 ERC2-IT1O76042 136 aa5.2□□□□□ -1.58
PTPRD-204ENST00000397606 CASC2Q6XLA1 102 aa5.2□□□□□ -1.58
PTPRD-204ENST00000397606 SPAG11AQ6PDA7 123 aa5.2□□□□□ -1.58
PTPRD-204ENST00000397606 J3QL48 77 aa5.19□□□□□ -1.58
PTPRD-204ENST00000397606 Q6Q795 121 aa5.19□□□□□ -1.58
PTPRD-204ENST00000397606 KRTAP10-2P60368 255 aa5.18□□□□□ -1.58
PTPRD-204ENST00000397606 IGFL1Q6UW32 110 aa5.18□□□□□ -1.58
PTPRD-204ENST00000397606 SPENQ96T58 3664 aaKnown RBP5.18□□□□□ -1.58
PTPRD-204ENST00000397606 CELSR1Q9NYQ6 3014 aa5.18□□□□□ -1.58
PTPRD-204ENST00000397606 LINC00304Q8N9R0 145 aa5.18□□□□□ -1.58
PTPRD-204ENST00000397606 Q6ZRN7 208 aaPredicted RBP5.17□□□□□ -1.58
PTPRD-204ENST00000397606 C20orf197Q8N268 126 aa5.17□□□□□ -1.58
PTPRD-204ENST00000397606 SPRR1AP35321 89 aa5.17□□□□□ -1.58
PTPRD-204ENST00000397606 Q8NDZ9 215 aa5.17□□□□□ -1.58
PTPRD-204ENST00000397606 HCG22E2RYF7 251 aa5.17□□□□□ -1.58
PTPRD-204ENST00000397606 A0A087WVE0 104 aa5.17□□□□□ -1.58
PTPRD-204ENST00000397606 SERP2Q8N6R1 65 aa5.17□□□□□ -1.58
PTPRD-204ENST00000397606 UQCRQO14949 82 aa5.16□□□□□ -1.58
PTPRD-204ENST00000397606 ANAPC11Q9NYG5 84 aa5.16□□□□□ -1.58
PTPRD-204ENST00000397606 KRTAP10-1P60331 282 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms