RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 PRB4P10163 310 aaPredicted RBP4.14□□□□□ -1.75
SMCO1-201ENST00000397537 CASC2Q6XLA1 102 aa4.14□□□□□ -1.75
SMCO1-201ENST00000397537 UBL5Q9BZL1 73 aa4.14□□□□□ -1.75
SMCO1-201ENST00000397537 C14orf132Q9NPU4 83 aa4.14□□□□□ -1.75
SMCO1-201ENST00000397537 LINC00846Q9NV44 126 aa4.14□□□□□ -1.75
SMCO1-201ENST00000397537 TENM3Q9P273 2699 aa4.13□□□□□ -1.75
SMCO1-201ENST00000397537 IGHV3OR16-8A0A075B7F1 116 aa4.13□□□□□ -1.75
SMCO1-201ENST00000397537 I3L3M4 83 aa4.13□□□□□ -1.75
SMCO1-201ENST00000397537 MAPK1IP1LQ8NDC0 245 aa4.13□□□□□ -1.75
SMCO1-201ENST00000397537 MUC4Q99102 2169 aa4.13□□□□□ -1.75
SMCO1-201ENST00000397537 KPRPQ5T749 579 aaPredicted RBP4.12□□□□□ -1.75
SMCO1-201ENST00000397537 Q8N9P0 234 aaPredicted RBP4.12□□□□□ -1.75
SMCO1-201ENST00000397537 OBSCN-AS1Q96MR7 158 aa4.12□□□□□ -1.75
SMCO1-201ENST00000397537 TMEM14CQ9P0S9 112 aa4.12□□□□□ -1.75
SMCO1-201ENST00000397537 S4R3C0 116 aa4.12□□□□□ -1.75
SMCO1-201ENST00000397537 MPDZO75970 2070 aa4.12□□□□□ -1.75
SMCO1-201ENST00000397537 CMYA5Q8N3K9 4069 aa4.12□□□□□ -1.75
SMCO1-201ENST00000397537 A8MU10 97 aa4.11□□□□□ -1.75
SMCO1-201ENST00000397537 PSCAO43653 123 aa4.11□□□□□ -1.75
SMCO1-201ENST00000397537 SPTBP11277 2137 aa4.11□□□□□ -1.75
SMCO1-201ENST00000397537 CR1P17927 2039 aa4.11□□□□□ -1.75
SMCO1-201ENST00000397537 IGIPA6NJ69 53 aa4.11□□□□□ -1.75
SMCO1-201ENST00000397537 M0R1W7 72 aa4.11□□□□□ -1.75
SMCO1-201ENST00000397537 P0C880 135 aa4.11□□□□□ -1.75
SMCO1-201ENST00000397537 MOBPQ13875 183 aa4.1□□□□□ -1.75
SMCO1-201ENST00000397537 C10orf128Q5T292 105 aa4.1□□□□□ -1.75
SMCO1-201ENST00000397537 ZNF833PQ6ZTB9 187 aa4.1□□□□□ -1.75
SMCO1-201ENST00000397537 KLK12Q9UKR0 248 aa4.1□□□□□ -1.75
SMCO1-201ENST00000397537 KIF25-AS1Q9Y6Z4 181 aa4.1□□□□□ -1.75
SMCO1-201ENST00000397537 IGLV3-16A0A075B6K0 115 aa4.09□□□□□ -1.75
SMCO1-201ENST00000397537 IGHV3-64A0A075B6Q5 118 aa4.09□□□□□ -1.75
SMCO1-201ENST00000397537 NREPQ16612 68 aa4.09□□□□□ -1.75
SMCO1-201ENST00000397537 ENHOQ6UWT2 76 aa4.09□□□□□ -1.75
SMCO1-201ENST00000397537 CDC42SE2Q9NRR3 84 aa4.09□□□□□ -1.75
SMCO1-201ENST00000397537 IGLV2-18A0A075B6J9 118 aa4.09□□□□□ -1.76
SMCO1-201ENST00000397537 IGKV3D-11A0A0A0MRZ8 115 aa4.09□□□□□ -1.76
SMCO1-201ENST00000397537 LOC101927531A0A1B0GV80 90 aa4.09□□□□□ -1.76
SMCO1-201ENST00000397537 JMJD7-PLA2G4BH0Y9G9 81 aa4.09□□□□□ -1.76
SMCO1-201ENST00000397537 SAA2P0DJI9 122 aaPredicted RBP4.09□□□□□ -1.76
SMCO1-201ENST00000397537 NDPQ00604 133 aa4.09□□□□□ -1.76
SMCO1-201ENST00000397537 FREM1Q5H8C1 2179 aa4.08□□□□□ -1.76
SMCO1-201ENST00000397537 A0A087WSZ3 146 aa4.08□□□□□ -1.76
SMCO1-201ENST00000397537 DYNC2H1Q8NCM8 4307 aaKnown RBP4.08□□□□□ -1.76
SMCO1-201ENST00000397537 IGLV10-54A0A075B6I4 117 aa4.07□□□□□ -1.76
SMCO1-201ENST00000397537 STATHP02808 62 aa4.07□□□□□ -1.76
SMCO1-201ENST00000397537 ELOF1P60002 83 aaKnown RBP4.07□□□□□ -1.76
SMCO1-201ENST00000397537 Q86TA4 180 aa4.07□□□□□ -1.76
SMCO1-201ENST00000397537 IGKV3-11P04433 115 aa4.07□□□□□ -1.76
SMCO1-201ENST00000397537 LINC00483Q53H64 154 aa4.07□□□□□ -1.76
SMCO1-201ENST00000397537 AMELXQ99217 191 aa4.07□□□□□ -1.76
SMCO1-201ENST00000397537 FREM3P0C091 2139 aa4.06□□□□□ -1.76
SMCO1-201ENST00000397537 IGKV3D-15A0A087WSY6 115 aa4.06□□□□□ -1.76
SMCO1-201ENST00000397537 RPS27P42677 84 aaKnown RBP4.06□□□□□ -1.76
SMCO1-201ENST00000397537 MIR22HGQ0VDD5 57 aa4.06□□□□□ -1.76
SMCO1-201ENST00000397537 SACSQ9NZJ4 4579 aa4.06□□□□□ -1.76
SMCO1-201ENST00000397537 ROS1P08922 2347 aa4.05□□□□□ -1.76
SMCO1-201ENST00000397537 NDUFB1O75438 58 aa4.05□□□□□ -1.76
SMCO1-201ENST00000397537 TFF1P04155 84 aa4.05□□□□□ -1.76
SMCO1-201ENST00000397537 FAM74A4Q5TZK3 123 aa4.05□□□□□ -1.76
SMCO1-201ENST00000397537 LINC00322Q6ZN03 302 aaPredicted RBP4.05□□□□□ -1.76
SMCO1-201ENST00000397537 CCL19Q99731 98 aa4.05□□□□□ -1.76
SMCO1-201ENST00000397537 CADP27708 2225 aa4.05□□□□□ -1.76
SMCO1-201ENST00000397537 TRAV12-3A0A0B4J271 114 aa4.05□□□□□ -1.76
SMCO1-201ENST00000397537 CXorf51AA0A1B0GTR3 108 aa4.05□□□□□ -1.76
SMCO1-201ENST00000397537 ODF3BA8MYP8 253 aa4.05□□□□□ -1.76
SMCO1-201ENST00000397537 Q8TAT8 98 aa4.05□□□□□ -1.76
SMCO1-201ENST00000397537 PRR15LQ9BU68 103 aa4.05□□□□□ -1.76
SMCO1-201ENST00000397537 CNFNQ9BYD5 112 aa4.05□□□□□ -1.76
SMCO1-201ENST00000397537 MRPL36Q9P0J6 103 aaKnown RBP4.05□□□□□ -1.76
SMCO1-201ENST00000397537 DNAJC13O75165 2243 aa4.04□□□□□ -1.76
SMCO1-201ENST00000397537 PDE6HQ13956 83 aa4.04□□□□□ -1.76
SMCO1-201ENST00000397537 NOTCH3Q9UM47 2321 aa4.04□□□□□ -1.76
SMCO1-201ENST00000397537 C22orf24Q9Y442 160 aa4.04□□□□□ -1.76
SMCO1-201ENST00000397537 DNAH1Q9P2D7 4330 aa4.03□□□□□ -1.76
SMCO1-201ENST00000397537 TRAV21A0A0B4J279 112 aa4.03□□□□□ -1.76
SMCO1-201ENST00000397537 IGLV3-1P01715 115 aa4.03□□□□□ -1.76
SMCO1-201ENST00000397537 C9orf163Q8N9P6 203 aa4.03□□□□□ -1.76
SMCO1-201ENST00000397537 Q9BRP9 147 aa4.03□□□□□ -1.76
SMCO1-201ENST00000397537 R4GN34 69 aa4.03□□□□□ -1.76
SMCO1-201ENST00000397537 HEATR5BQ9P2D3 2071 aa4.03□□□□□ -1.76
SMCO1-201ENST00000397537 MED12Q93074 2177 aa4.03□□□□□ -1.76
SMCO1-201ENST00000397537 TRAV10A0A0B4J240 114 aa4.02□□□□□ -1.77
SMCO1-201ENST00000397537 H0YGX0 51 aa4.02□□□□□ -1.77
SMCO1-201ENST00000397537 COL7A1Q02388 2944 aa4.02□□□□□ -1.77
SMCO1-201ENST00000397537 UBR4Q5T4S7 5183 aa4.02□□□□□ -1.77
SMCO1-201ENST00000397537 C10orf113Q5VZT2 155 aa4.02□□□□□ -1.77
SMCO1-201ENST00000397537 SMIM2Q9BVW6 85 aa4.02□□□□□ -1.77
SMCO1-201ENST00000397537 TENM2Q9NT68 2774 aa4.02□□□□□ -1.77
SMCO1-201ENST00000397537 IGKV3-20P01619 116 aa4.01□□□□□ -1.77
SMCO1-201ENST00000397537 NDUFA4L2Q9NRX3 87 aa4.01□□□□□ -1.77
SMCO1-201ENST00000397537 TRBV6-5A0A0K0K1A5 114 aa4□□□□□ -1.77
SMCO1-201ENST00000397537 COX14Q96I36 57 aa4□□□□□ -1.77
SMCO1-201ENST00000397537 ORMDL1Q9P0S3 153 aa4□□□□□ -1.77
SMCO1-201ENST00000397537 CTSGP08311 255 aa4□□□□□ -1.77
SMCO1-201ENST00000397537 PDE6GP18545 87 aa4□□□□□ -1.77
SMCO1-201ENST00000397537 LYPD1Q8N2G4 141 aa4□□□□□ -1.77
SMCO1-201ENST00000397537 SPINK14Q6IE38 97 aa3.99□□□□□ -1.77
SMCO1-201ENST00000397537 KRTAP26-1Q6PEX3 210 aa3.99□□□□□ -1.77
SMCO1-201ENST00000397537 WFDC9Q8NEX5 89 aa3.99□□□□□ -1.77
SMCO1-201ENST00000397537 A0A096LNT2 108 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms