RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 TRACP01848 142 aa12.01□□□□□ -0.49
TSPAN4-204ENST00000397404 A0A087WYN8 130 aa12□□□□□ -0.49
TSPAN4-204ENST00000397404 SPRR1AP35321 89 aa12□□□□□ -0.49
TSPAN4-204ENST00000397404 Q6ZSA8 131 aa12□□□□□ -0.49
TSPAN4-204ENST00000397404 PKD1P98161 4303 aa11.99□□□□□ -0.49
TSPAN4-204ENST00000397404 SLC25A20O43772 301 aa11.99□□□□□ -0.49
TSPAN4-204ENST00000397404 TCL1BO95988 128 aa11.99□□□□□ -0.49
TSPAN4-204ENST00000397404 GHRHP01286 108 aa11.99□□□□□ -0.49
TSPAN4-204ENST00000397404 ELOF1P60002 83 aaKnown RBP11.99□□□□□ -0.49
TSPAN4-204ENST00000397404 DNAH5Q8TE73 4624 aa11.98□□□□□ -0.49
TSPAN4-204ENST00000397404 INAFM2P0DMQ5 153 aa11.98□□□□□ -0.49
TSPAN4-204ENST00000397404 UBE2BP63146 152 aa11.98□□□□□ -0.49
TSPAN4-204ENST00000397404 COX7BP24311 80 aa11.97□□□□□ -0.49
TSPAN4-204ENST00000397404 REG3GQ6UW15 175 aa11.97□□□□□ -0.49
TSPAN4-204ENST00000397404 A0A1B0GVY2 172 aa11.96□□□□□ -0.49
TSPAN4-204ENST00000397404 H3BQ85 93 aa11.96□□□□□ -0.49
TSPAN4-204ENST00000397404 PANO1I0J062 215 aa11.95□□□□□ -0.5
TSPAN4-204ENST00000397404 DNAL4O96015 105 aa11.95□□□□□ -0.5
TSPAN4-204ENST00000397404 ETDCA0A1B0GVM5 59 aa11.95□□□□□ -0.5
TSPAN4-204ENST00000397404 RPL37AP8A6NKH3 93 aa11.95□□□□□ -0.5
TSPAN4-204ENST00000397404 F8W1H4 67 aa11.94□□□□□ -0.5
TSPAN4-204ENST00000397404 H3BMG7 143 aa11.94□□□□□ -0.5
TSPAN4-204ENST00000397404 LINC00575Q6W349 94 aa11.94□□□□□ -0.5
TSPAN4-204ENST00000397404 CLEC2BQ92478 149 aa11.94□□□□□ -0.5
TSPAN4-204ENST00000397404 DHRS4-AS1Q9P1J3 65 aa11.94□□□□□ -0.5
TSPAN4-204ENST00000397404 KRTAP4-16G5E9R7 235 aaPredicted RBP11.93□□□□□ -0.5
TSPAN4-204ENST00000397404 PHF5AQ7RTV0 110 aaKnown RBP11.93□□□□□ -0.5
TSPAN4-204ENST00000397404 DNAH8Q96JB1 4490 aa11.93□□□□□ -0.5
TSPAN4-204ENST00000397404 H0Y9J4 135 aa11.92□□□□□ -0.5
TSPAN4-204ENST00000397404 FUSP35637 526 aaKnown RBP eCLIP11.92□□□□□ -0.5
TSPAN4-204ENST00000397404 OCIAD2Q56VL3 154 aa11.92□□□□□ -0.5
TSPAN4-204ENST00000397404 Q6ZRX8 168 aa11.92□□□□□ -0.5
TSPAN4-204ENST00000397404 hADV29S1A0JD25 119 aa11.91□□□□□ -0.5
TSPAN4-204ENST00000397404 LINC00528Q8N1L1 170 aa11.91□□□□□ -0.5
TSPAN4-204ENST00000397404 KRTAP10-1P60331 282 aa11.9□□□□□ -0.5
TSPAN4-204ENST00000397404 B5MCH6 92 aa11.89□□□□□ -0.51
TSPAN4-204ENST00000397404 H3BT86 120 aa11.89□□□□□ -0.51
TSPAN4-204ENST00000397404 LINC01600Q96MT4 127 aa11.89□□□□□ -0.51
TSPAN4-204ENST00000397404 FAM218AQ96MZ4 157 aa11.88□□□□□ -0.51
TSPAN4-204ENST00000397404 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.87□□□□□ -0.51
TSPAN4-204ENST00000397404 CIRBP-AS1Q8TBR5 109 aa11.87□□□□□ -0.51
TSPAN4-204ENST00000397404 BCE1O60756 84 aa11.86□□□□□ -0.51
TSPAN4-204ENST00000397404 C9JAW5 83 aa11.85□□□□□ -0.51
TSPAN4-204ENST00000397404 ORMDL1Q9P0S3 153 aa11.85□□□□□ -0.51
TSPAN4-204ENST00000397404 SCXQ7RTU7 201 aa11.84□□□□□ -0.51
TSPAN4-204ENST00000397404 PPDPFLQ8WWR9 84 aa11.84□□□□□ -0.51
TSPAN4-204ENST00000397404 FAM30AQ9NZY2 134 aa11.84□□□□□ -0.51
TSPAN4-204ENST00000397404 FAM19A1Q7Z5A9 133 aa11.83□□□□□ -0.52
TSPAN4-204ENST00000397404 TMEM256-PLSCR3K7ERE1 68 aa11.83□□□□□ -0.52
TSPAN4-204ENST00000397404 PRO0461Q9UI25 63 aa11.83□□□□□ -0.52
TSPAN4-204ENST00000397404 ANKRD29Q8N6D5 301 aa11.82□□□□□ -0.52
TSPAN4-204ENST00000397404 UBE2AP49459 152 aa11.8□□□□□ -0.52
TSPAN4-204ENST00000397404 PKHD1P08F94 4074 aa11.78□□□□□ -0.52
TSPAN4-204ENST00000397404 BAALC-AS2P0C853 105 aa11.78□□□□□ -0.52
TSPAN4-204ENST00000397404 PSORS1C2Q9UIG4 136 aa11.78□□□□□ -0.52
TSPAN4-204ENST00000397404 Q6ZQY7 126 aa11.77□□□□□ -0.52
TSPAN4-204ENST00000397404 Q9BRP9 147 aa11.77□□□□□ -0.52
TSPAN4-204ENST00000397404 LRP1BQ9NZR2 4599 aa11.76□□□□□ -0.53
TSPAN4-204ENST00000397404 KRTAP13-1Q8IUC0 172 aa11.76□□□□□ -0.53
TSPAN4-204ENST00000397404 KRTAP11-1Q8IUC1 163 aa11.76□□□□□ -0.53
TSPAN4-204ENST00000397404 C1orf137Q5JT78 98 aa11.74□□□□□ -0.53
TSPAN4-204ENST00000397404 SMCR5Q8TEV8 140 aa11.74□□□□□ -0.53
TSPAN4-204ENST00000397404 RYR3Q15413 4870 aa11.73□□□□□ -0.53
TSPAN4-204ENST00000397404 DYNC1H1Q14204 4646 aaKnown RBP11.73□□□□□ -0.53
TSPAN4-204ENST00000397404 TEN1Q86WV5 123 aa11.73□□□□□ -0.53
TSPAN4-204ENST00000397404 ZNF861PO60384 105 aa11.72□□□□□ -0.53
TSPAN4-204ENST00000397404 PRLHP81277 87 aa11.72□□□□□ -0.53
TSPAN4-204ENST00000397404 IGLV5-48A0A075B6I7 105 aa11.71□□□□□ -0.53
TSPAN4-204ENST00000397404 SMCPP49901 116 aaPredicted RBP11.71□□□□□ -0.53
TSPAN4-204ENST00000397404 C21orf62-AS1Q17RA5 79 aa11.71□□□□□ -0.53
TSPAN4-204ENST00000397404 HIGD2AQ9BW72 106 aa11.71□□□□□ -0.53
TSPAN4-204ENST00000397404 ZNF706Q9Y5V0 76 aaPredicted RBP11.71□□□□□ -0.53
TSPAN4-204ENST00000397404 JMJD7-PLA2G4BH0Y9G9 81 aa11.7□□□□□ -0.54
TSPAN4-204ENST00000397404 IGLV7-43P04211 117 aa11.7□□□□□ -0.54
TSPAN4-204ENST00000397404 MTURNQ8N3F0 131 aa11.7□□□□□ -0.54
TSPAN4-204ENST00000397404 TEX49A0A1B0GTD5 131 aa11.69□□□□□ -0.54
TSPAN4-204ENST00000397404 ETDBQ3ZM63 59 aa11.67□□□□□ -0.54
TSPAN4-204ENST00000397404 XGP55808 180 aa11.66□□□□□ -0.54
TSPAN4-204ENST00000397404 CDK2AP2O75956 126 aa11.65□□□□□ -0.54
TSPAN4-204ENST00000397404 SPRR1BP22528 89 aa11.64□□□□□ -0.55
TSPAN4-204ENST00000397404 J3QR89 54 aa11.63□□□□□ -0.55
TSPAN4-204ENST00000397404 ERC2-IT1O76042 136 aa11.63□□□□□ -0.55
TSPAN4-204ENST00000397404 LINC01547P58512 204 aaPredicted RBP11.63□□□□□ -0.55
TSPAN4-204ENST00000397404 OBSCN-AS1Q96MR7 158 aa11.63□□□□□ -0.55
TSPAN4-204ENST00000397404 LAMTOR3Q9UHA4 124 aa11.63□□□□□ -0.55
TSPAN4-204ENST00000397404 PDE6GP18545 87 aa11.62□□□□□ -0.55
TSPAN4-204ENST00000397404 Q8N377 158 aa11.62□□□□□ -0.55
TSPAN4-204ENST00000397404 NDUFV3P56181 108 aaKnown RBP11.6□□□□□ -0.55
TSPAN4-204ENST00000397404 RPL37AP61513 92 aaKnown RBP11.59□□□□□ -0.55
TSPAN4-204ENST00000397404 RBM3P98179 157 aaKnown RBP11.59□□□□□ -0.55
TSPAN4-204ENST00000397404 DEFB105AQ8NG35 78 aa11.58□□□□□ -0.56
TSPAN4-204ENST00000397404 APOBP04114 4563 aaKnown RBP11.58□□□□□ -0.56
TSPAN4-204ENST00000397404 F8WEM9 126 aa11.57□□□□□ -0.56
TSPAN4-204ENST00000397404 LINC00483Q53H64 154 aa11.57□□□□□ -0.56
TSPAN4-204ENST00000397404 ST20-AS1Q8NBB2 130 aa11.57□□□□□ -0.56
TSPAN4-204ENST00000397404 HAMPP81172 84 aa11.57□□□□□ -0.56
TSPAN4-204ENST00000397404 SPRR4Q96PI1 79 aa11.57□□□□□ -0.56
TSPAN4-204ENST00000397404 K7ERU9 68 aa11.56□□□□□ -0.56
TSPAN4-204ENST00000397404 DSCR8Q96T75 97 aa11.56□□□□□ -0.56
TSPAN4-204ENST00000397404 VPS13BQ7Z7G8 4022 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms