RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 VPS13BQ7Z7G8 4022 aa14.53□□□□□ -0.08
TSPAN4-203ENST00000397397 BVES-AS1Q5T3Y7 98 aa14.53□□□□□ -0.08
TSPAN4-203ENST00000397397 BCE1O60756 84 aa14.52□□□□□ -0.08
TSPAN4-203ENST00000397397 A0A0B4J2C4 111 aa14.51□□□□□ -0.09
TSPAN4-203ENST00000397397 RPL13AP40429 203 aaKnown RBP14.51□□□□□ -0.09
TSPAN4-203ENST00000397397 HINT1P49773 126 aaPredicted RBP14.51□□□□□ -0.09
TSPAN4-203ENST00000397397 M0R143 59 aa14.5□□□□□ -0.09
TSPAN4-203ENST00000397397 KRTAP10-4P60372 401 aaPredicted RBP14.5□□□□□ -0.09
TSPAN4-203ENST00000397397 NHP2Q9NX24 153 aaKnown RBP14.5□□□□□ -0.09
TSPAN4-203ENST00000397397 IGLV7-43P04211 117 aa14.49□□□□□ -0.09
TSPAN4-203ENST00000397397 SPRR1AP35321 89 aa14.49□□□□□ -0.09
TSPAN4-203ENST00000397397 FAM19A1Q7Z5A9 133 aa14.49□□□□□ -0.09
TSPAN4-203ENST00000397397 ZNF73O43830 326 aaPredicted RBP14.48□□□□□ -0.09
TSPAN4-203ENST00000397397 ETDCA0A1B0GVM5 59 aa14.47□□□□□ -0.09
TSPAN4-203ENST00000397397 UBE2AP49459 152 aa14.46□□□□□ -0.09
TSPAN4-203ENST00000397397 H7C2G1 150 aa14.45□□□□□ -0.1
TSPAN4-203ENST00000397397 SMIM11BQ8TCY0 68 aa14.45□□□□□ -0.1
TSPAN4-203ENST00000397397 DIRC1Q969H9 104 aa14.45□□□□□ -0.1
TSPAN4-203ENST00000397397 PRO1854Q9UHT4 67 aa14.45□□□□□ -0.1
TSPAN4-203ENST00000397397 KRTAP4-16G5E9R7 235 aaPredicted RBP14.44□□□□□ -0.1
TSPAN4-203ENST00000397397 K7ERJ3 54 aa14.44□□□□□ -0.1
TSPAN4-203ENST00000397397 A0A1B0GWB2 263 aa14.43□□□□□ -0.1
TSPAN4-203ENST00000397397 C6orf99Q4VX62 202 aa14.43□□□□□ -0.1
TSPAN4-203ENST00000397397 PRLHP81277 87 aa14.42□□□□□ -0.1
TSPAN4-203ENST00000397397 RPL28P46779 137 aaKnown RBP14.41□□□□□ -0.1
TSPAN4-203ENST00000397397 B5MCH6 92 aa14.41□□□□□ -0.1
TSPAN4-203ENST00000397397 ZNF861PO60384 105 aa14.41□□□□□ -0.1
TSPAN4-203ENST00000397397 BATFQ16520 125 aa14.41□□□□□ -0.1
TSPAN4-203ENST00000397397 PCP4L1A6NKN8 68 aa14.4□□□□□ -0.1
TSPAN4-203ENST00000397397 Q1RN00 199 aa14.4□□□□□ -0.1
TSPAN4-203ENST00000397397 KRTAP13-1Q8IUC0 172 aa14.4□□□□□ -0.1
TSPAN4-203ENST00000397397 PKHD1L1Q86WI1 4243 aa14.37□□□□□ -0.11
TSPAN4-203ENST00000397397 H0Y9J4 135 aa14.37□□□□□ -0.11
TSPAN4-203ENST00000397397 COX7BP24311 80 aa14.37□□□□□ -0.11
TSPAN4-203ENST00000397397 Q6ZRX8 168 aa14.36□□□□□ -0.11
TSPAN4-203ENST00000397397 TRBV7-6A0A0J9YX20 115 aa14.35□□□□□ -0.11
TSPAN4-203ENST00000397397 SPINK6Q6UWN8 80 aa14.35□□□□□ -0.11
TSPAN4-203ENST00000397397 INAFM2P0DMQ5 153 aa14.34□□□□□ -0.11
TSPAN4-203ENST00000397397 HIGD2AQ9BW72 106 aa14.34□□□□□ -0.11
TSPAN4-203ENST00000397397 ELOF1P60002 83 aaKnown RBP14.33□□□□□ -0.11
TSPAN4-203ENST00000397397 VAMP3Q15836 100 aa14.33□□□□□ -0.11
TSPAN4-203ENST00000397397 SRRM2Q9UQ35 2752 aaKnown RBP14.32□□□□□ -0.12
TSPAN4-203ENST00000397397 TSPAN13O95857 204 aa14.31□□□□□ -0.12
TSPAN4-203ENST00000397397 Q9BRP9 147 aa14.31□□□□□ -0.12
TSPAN4-203ENST00000397397 SMCR5Q8TEV8 140 aa14.3□□□□□ -0.12
TSPAN4-203ENST00000397397 PSMB2P49721 201 aa14.28□□□□□ -0.12
TSPAN4-203ENST00000397397 SNHG12Q9BXW3 62 aa14.27□□□□□ -0.12
TSPAN4-203ENST00000397397 DHRS4-AS1Q9P1J3 65 aa14.27□□□□□ -0.12
TSPAN4-203ENST00000397397 TRIAP1O43715 76 aa14.26□□□□□ -0.13
TSPAN4-203ENST00000397397 ERC2-IT1O76042 136 aa14.24□□□□□ -0.13
TSPAN4-203ENST00000397397 H0YGX0 51 aa14.22□□□□□ -0.13
TSPAN4-203ENST00000397397 LINC00575Q6W349 94 aa14.22□□□□□ -0.13
TSPAN4-203ENST00000397397 SLC25A20O43772 301 aa14.21□□□□□ -0.13
TSPAN4-203ENST00000397397 COX6CP09669 75 aa14.2□□□□□ -0.14
TSPAN4-203ENST00000397397 NAA38Q9BRA0 125 aaKnown RBP14.19□□□□□ -0.14
TSPAN4-203ENST00000397397 MYCBP2O75592 4640 aa14.19□□□□□ -0.14
TSPAN4-203ENST00000397397 SCGB1C2P0DMR2 95 aa14.17□□□□□ -0.14
TSPAN4-203ENST00000397397 ZNF706Q9Y5V0 76 aaPredicted RBP14.17□□□□□ -0.14
TSPAN4-203ENST00000397397 hADV29S1A0JD25 119 aa14.16□□□□□ -0.14
TSPAN4-203ENST00000397397 SPRR4Q96PI1 79 aa14.16□□□□□ -0.14
TSPAN4-203ENST00000397397 ST20-AS1Q8NBB2 130 aa14.15□□□□□ -0.14
TSPAN4-203ENST00000397397 FAM218AQ96MZ4 157 aa14.15□□□□□ -0.14
TSPAN4-203ENST00000397397 FLG2Q5D862 2391 aaPredicted RBP14.15□□□□□ -0.14
TSPAN4-203ENST00000397397 TAX1BP3O14907 124 aa14.15□□□□□ -0.14
TSPAN4-203ENST00000397397 CLEC2BQ92478 149 aa14.15□□□□□ -0.14
TSPAN4-203ENST00000397397 COL5A1-AS1Q5SY13 56 aa14.14□□□□□ -0.15
TSPAN4-203ENST00000397397 KRTAP1-4P0C5Y4 121 aa14.13□□□□□ -0.15
TSPAN4-203ENST00000397397 H3BUT2 72 aa14.12□□□□□ -0.15
TSPAN4-203ENST00000397397 SNCGO76070 127 aa14.12□□□□□ -0.15
TSPAN4-203ENST00000397397 GAGE2AQ6NT46 116 aa14.12□□□□□ -0.15
TSPAN4-203ENST00000397397 C9orf118A6NHY6 69 aa14.11□□□□□ -0.15
TSPAN4-203ENST00000397397 ANAPC11Q9NYG5 84 aa14.11□□□□□ -0.15
TSPAN4-203ENST00000397397 A0A1B0GX51 115 aa14.08□□□□□ -0.15
TSPAN4-203ENST00000397397 Q6ZQY7 126 aa14.08□□□□□ -0.15
TSPAN4-203ENST00000397397 DEFB105AQ8NG35 78 aa14.08□□□□□ -0.15
TSPAN4-203ENST00000397397 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.07□□□□□ -0.16
TSPAN4-203ENST00000397397 LINC00483Q53H64 154 aa14.06□□□□□ -0.16
TSPAN4-203ENST00000397397 FAT3Q8TDW7 4589 aa14.05□□□□□ -0.16
TSPAN4-203ENST00000397397 FAM229BQ4G0N7 80 aa14.05□□□□□ -0.16
TSPAN4-203ENST00000397397 LYRM7Q5U5X0 104 aa14.05□□□□□ -0.16
TSPAN4-203ENST00000397397 LINC01600Q96MT4 127 aa14.04□□□□□ -0.16
TSPAN4-203ENST00000397397 HERC1Q15751 4861 aa14.03□□□□□ -0.16
TSPAN4-203ENST00000397397 TEX49A0A1B0GTD5 131 aa14.03□□□□□ -0.16
TSPAN4-203ENST00000397397 IGLV5-48A0A075B6I7 105 aa14.02□□□□□ -0.16
TSPAN4-203ENST00000397397 LST1O00453 97 aa14.02□□□□□ -0.16
TSPAN4-203ENST00000397397 OXTP01178 125 aa14.02□□□□□ -0.16
TSPAN4-203ENST00000397397 CRYGAP11844 174 aa14.02□□□□□ -0.16
TSPAN4-203ENST00000397397 LINC01547P58512 204 aaPredicted RBP14.02□□□□□ -0.16
TSPAN4-203ENST00000397397 PRR26Q8N8Z3 221 aa14.02□□□□□ -0.16
TSPAN4-203ENST00000397397 LRP1Q07954 4544 aaKnown RBP14.02□□□□□ -0.17
TSPAN4-203ENST00000397397 A0A087X002 238 aa14.01□□□□□ -0.17
TSPAN4-203ENST00000397397 A0A1W2PPM0 123 aa14.01□□□□□ -0.17
TSPAN4-203ENST00000397397 DNAL4O96015 105 aa14.01□□□□□ -0.17
TSPAN4-203ENST00000397397 SPRR1BP22528 89 aa14.01□□□□□ -0.17
TSPAN4-203ENST00000397397 TCL1BO95988 128 aa14□□□□□ -0.17
TSPAN4-203ENST00000397397 Q8N377 158 aa13.99□□□□□ -0.17
TSPAN4-203ENST00000397397 TRACP01848 142 aa13.98□□□□□ -0.17
TSPAN4-203ENST00000397397 FABP2P12104 132 aa13.98□□□□□ -0.17
TSPAN4-203ENST00000397397 ATXN8Q156A1 80 aa13.98□□□□□ -0.17
TSPAN4-203ENST00000397397 KRTAP29-1A8MX34 341 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms