RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 S100A12P80511 92 aa9.82□□□□□ -0.84
EXOSC3-202ENST00000396521 LINC00483Q53H64 154 aa9.82□□□□□ -0.84
EXOSC3-202ENST00000396521 SSBP3-AS1Q7Z2R9 100 aa9.82□□□□□ -0.84
EXOSC3-202ENST00000396521 KCNQ1DNQ9H478 68 aa9.82□□□□□ -0.84
EXOSC3-202ENST00000396521 SMCR5Q8TEV8 140 aa9.81□□□□□ -0.84
EXOSC3-202ENST00000396521 CRCT1Q9UGL9 99 aa9.81□□□□□ -0.84
EXOSC3-202ENST00000396521 ETDCA0A1B0GVM5 59 aa9.8□□□□□ -0.84
EXOSC3-202ENST00000396521 HSBP1L1C9JCN9 74 aa9.8□□□□□ -0.84
EXOSC3-202ENST00000396521 SLC25A20O43772 301 aa9.8□□□□□ -0.84
EXOSC3-202ENST00000396521 SCGB1D1O95968 90 aa9.8□□□□□ -0.84
EXOSC3-202ENST00000396521 LINC00587B1AMM8 73 aa9.79□□□□□ -0.84
EXOSC3-202ENST00000396521 A0A0U1RRA0 63 aa9.78□□□□□ -0.84
EXOSC3-202ENST00000396521 BOD1L2Q8IYS8 172 aa9.78□□□□□ -0.84
EXOSC3-202ENST00000396521 KRTAP4-1Q9BYQ7 146 aa9.78□□□□□ -0.84
EXOSC3-202ENST00000396521 KRTAP4-16G5E9R7 235 aaPredicted RBP9.77□□□□□ -0.85
EXOSC3-202ENST00000396521 Q8N377 158 aa9.77□□□□□ -0.85
EXOSC3-202ENST00000396521 ZNF815PA8K554 130 aa9.76□□□□□ -0.85
EXOSC3-202ENST00000396521 SMIM13P0DJ93 91 aa9.76□□□□□ -0.85
EXOSC3-202ENST00000396521 XP32Q5T750 250 aa9.76□□□□□ -0.85
EXOSC3-202ENST00000396521 ANKRD39Q53RE8 183 aa9.75□□□□□ -0.85
EXOSC3-202ENST00000396521 GAGE2AQ6NT46 116 aa9.75□□□□□ -0.85
EXOSC3-202ENST00000396521 MOBPQ13875 183 aa9.73□□□□□ -0.85
EXOSC3-202ENST00000396521 MIR7-3HGQ8N6C7 128 aa9.73□□□□□ -0.85
EXOSC3-202ENST00000396521 A0A0J9YXY3 114 aa9.72□□□□□ -0.85
EXOSC3-202ENST00000396521 MIEN1Q9BRT3 115 aa9.72□□□□□ -0.85
EXOSC3-202ENST00000396521 TTTY13Q9BZ97 58 aa9.72□□□□□ -0.85
EXOSC3-202ENST00000396521 IGLV9-49A0A0B4J1Y8 123 aa9.71□□□□□ -0.86
EXOSC3-202ENST00000396521 TRBV10-3A0A0K0K1G6 114 aa9.71□□□□□ -0.86
EXOSC3-202ENST00000396521 SCGB1D4Q6XE38 83 aa9.71□□□□□ -0.86
EXOSC3-202ENST00000396521 B5MCH6 92 aa9.7□□□□□ -0.86
EXOSC3-202ENST00000396521 NCR3O14931 201 aa9.7□□□□□ -0.86
EXOSC3-202ENST00000396521 CFC1BP0CG36 223 aa9.7□□□□□ -0.86
EXOSC3-202ENST00000396521 FSIP2Q5CZC0 6907 aa9.68□□□□□ -0.86
EXOSC3-202ENST00000396521 JOSD1Q15040 202 aaPredicted RBP9.68□□□□□ -0.86
EXOSC3-202ENST00000396521 PCP2Q8IVA1 136 aa9.68□□□□□ -0.86
EXOSC3-202ENST00000396521 TRBV10-2A0A0K0K1G8 114 aa9.67□□□□□ -0.86
EXOSC3-202ENST00000396521 VAMP8Q9BV40 100 aa9.67□□□□□ -0.86
EXOSC3-202ENST00000396521 LOC107984156A0A0G2JMH3 177 aa9.66□□□□□ -0.86
EXOSC3-202ENST00000396521 TIMM17BO60830 172 aa9.66□□□□□ -0.86
EXOSC3-202ENST00000396521 LCE2CQ5TA81 110 aa9.66□□□□□ -0.86
EXOSC3-202ENST00000396521 Q6ZRX8 168 aa9.66□□□□□ -0.86
EXOSC3-202ENST00000396521 ARL17AQ8IVW1 177 aa9.66□□□□□ -0.86
EXOSC3-202ENST00000396521 DDTP30046 118 aa9.65□□□□□ -0.86
EXOSC3-202ENST00000396521 NPC2P61916 151 aa9.65□□□□□ -0.86
EXOSC3-202ENST00000396521 PAM16Q9Y3D7 125 aa9.65□□□□□ -0.86
EXOSC3-202ENST00000396521 ERC2-IT1O76042 136 aa9.64□□□□□ -0.87
EXOSC3-202ENST00000396521 SPATA45Q537H7 98 aa9.63□□□□□ -0.87
EXOSC3-202ENST00000396521 Q9BRP9 147 aa9.63□□□□□ -0.87
EXOSC3-202ENST00000396521 ADAMTSL4-AS1Q5T5F5 129 aa9.62□□□□□ -0.87
EXOSC3-202ENST00000396521 LITAFQ99732 161 aa9.62□□□□□ -0.87
EXOSC3-202ENST00000396521 PYY3Q5JQD4 70 aa9.61□□□□□ -0.87
EXOSC3-202ENST00000396521 C9orf153Q5TBE3 101 aa9.61□□□□□ -0.87
EXOSC3-202ENST00000396521 COPS9Q8WXC6 57 aa9.61□□□□□ -0.87
EXOSC3-202ENST00000396521 SPANXB1Q9NS25 103 aaPredicted RBP9.61□□□□□ -0.87
EXOSC3-202ENST00000396521 LIMD2Q9BT23 127 aa9.6□□□□□ -0.87
EXOSC3-202ENST00000396521 SPANXDQ9BXN6 97 aa9.6□□□□□ -0.87
EXOSC3-202ENST00000396521 SPANXCQ9NY87 97 aa9.6□□□□□ -0.87
EXOSC3-202ENST00000396521 CBY1Q9Y3M2 126 aa9.6□□□□□ -0.87
EXOSC3-202ENST00000396521 COX8AP10176 69 aa9.59□□□□□ -0.87
EXOSC3-202ENST00000396521 LINC00308Q8TCZ7 52 aa9.59□□□□□ -0.87
EXOSC3-202ENST00000396521 NDUFC2O95298 119 aa9.58□□□□□ -0.88
EXOSC3-202ENST00000396521 MT1HP80294 61 aa9.58□□□□□ -0.88
EXOSC3-202ENST00000396521 KRTAP19-2Q3LHN2 52 aa9.58□□□□□ -0.88
EXOSC3-202ENST00000396521 S100A7L2Q5SY68 101 aa9.58□□□□□ -0.88
EXOSC3-202ENST00000396521 SOSTDC1Q6X4U4 206 aa9.58□□□□□ -0.88
EXOSC3-202ENST00000396521 IGLV6-57P01721 117 aa9.57□□□□□ -0.88
EXOSC3-202ENST00000396521 SLC25A34Q6PIV7 304 aa9.57□□□□□ -0.88
EXOSC3-202ENST00000396521 IGLV8-61A0A075B6I0 122 aa9.56□□□□□ -0.88
EXOSC3-202ENST00000396521 Q6ZVH6 145 aa9.56□□□□□ -0.88
EXOSC3-202ENST00000396521 IFITM1P13164 125 aa9.55□□□□□ -0.88
EXOSC3-202ENST00000396521 HINT1P49773 126 aaPredicted RBP9.55□□□□□ -0.88
EXOSC3-202ENST00000396521 PCOTHQ58A44 107 aa9.55□□□□□ -0.88
EXOSC3-202ENST00000396521 C14orf144Q96I85 54 aa9.55□□□□□ -0.88
EXOSC3-202ENST00000396521 TRAV23DV6A0A075B6W5 121 aa9.54□□□□□ -0.88
EXOSC3-202ENST00000396521 DLEU1O43261 78 aa9.54□□□□□ -0.88
EXOSC3-202ENST00000396521 ZNF73O43830 326 aaPredicted RBP9.53□□□□□ -0.88
EXOSC3-202ENST00000396521 EIF4EBP3O60516 100 aaPredicted RBP9.53□□□□□ -0.88
EXOSC3-202ENST00000396521 SMIM6P0DI80 62 aa9.5□□□□□ -0.89
EXOSC3-202ENST00000396521 SPRR1BP22528 89 aa9.5□□□□□ -0.89
EXOSC3-202ENST00000396521 LORP23490 312 aaPredicted RBP9.5□□□□□ -0.89
EXOSC3-202ENST00000396521 MUSTN1Q8IVN3 82 aa9.5□□□□□ -0.89
EXOSC3-202ENST00000396521 OR13C6PQ8NH95 151 aa9.5□□□□□ -0.89
EXOSC3-202ENST00000396521 HIST1H4GQ99525 98 aa9.5□□□□□ -0.89
EXOSC3-202ENST00000396521 CD164Q04900 197 aa9.48□□□□□ -0.89
EXOSC3-202ENST00000396521 LINC00518Q8N0U6 118 aa9.48□□□□□ -0.89
EXOSC3-202ENST00000396521 ST20-AS1Q8NBB2 130 aa9.48□□□□□ -0.89
EXOSC3-202ENST00000396521 LAMTOR3Q9UHA4 124 aa9.48□□□□□ -0.89
EXOSC3-202ENST00000396521 KRTAP10-6P60371 365 aaPredicted RBP9.47□□□□□ -0.89
EXOSC3-202ENST00000396521 DHRS4-AS1Q9P1J3 65 aa9.47□□□□□ -0.89
EXOSC3-202ENST00000396521 HIGD1BQ9P298 99 aa9.47□□□□□ -0.89
EXOSC3-202ENST00000396521 C9orf92A6NGG3 77 aa9.46□□□□□ -0.9
EXOSC3-202ENST00000396521 A6NDN8 102 aa9.44□□□□□ -0.9
EXOSC3-202ENST00000396521 M0R2T5 61 aa9.44□□□□□ -0.9
EXOSC3-202ENST00000396521 C2orf91Q6ZV80 131 aa9.44□□□□□ -0.9
EXOSC3-202ENST00000396521 UQCR10Q9UDW1 63 aa9.44□□□□□ -0.9
EXOSC3-202ENST00000396521 Q5XG85 94 aa9.43□□□□□ -0.9
EXOSC3-202ENST00000396521 TRAV13-2A0A0B4J235 113 aa9.42□□□□□ -0.9
EXOSC3-202ENST00000396521 LOC105371267A0A1B0GV96 52 aa9.42□□□□□ -0.9
EXOSC3-202ENST00000396521 A4D1N5 150 aa9.42□□□□□ -0.9
EXOSC3-202ENST00000396521 HRCT1Q6UXD1 115 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms