RNA–Protein interactions for RNA: ENST00000396081.5

HERPUD2-202, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 3,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-202ENST00000396081 ITPR2Q14571 2701 aa12□□□□□ -0.49
HERPUD2-202ENST00000396081 ESRGQ1W209 222 aa12□□□□□ -0.49
HERPUD2-202ENST00000396081 Q8NAQ8 132 aa12□□□□□ -0.49
HERPUD2-202ENST00000396081 SMIM29Q86T20 159 aa11.99□□□□□ -0.49
HERPUD2-202ENST00000396081 F8WDY8 70 aa11.98□□□□□ -0.49
HERPUD2-202ENST00000396081 KRTAP1-1Q07627 177 aa11.97□□□□□ -0.49
HERPUD2-202ENST00000396081 NKAPP1Q8N9T2 125 aa11.97□□□□□ -0.49
HERPUD2-202ENST00000396081 Q6ZRP5 223 aa11.96□□□□□ -0.49
HERPUD2-202ENST00000396081 KPRPQ5T749 579 aaPredicted RBP11.95□□□□□ -0.5
HERPUD2-202ENST00000396081 Q6ZTC4 211 aa11.95□□□□□ -0.5
HERPUD2-202ENST00000396081 Q8N377 158 aa11.95□□□□□ -0.5
HERPUD2-202ENST00000396081 ATRQ13535 2644 aa11.94□□□□□ -0.5
HERPUD2-202ENST00000396081 HIVEP1P15822 2718 aa11.94□□□□□ -0.5
HERPUD2-202ENST00000396081 C15orf56Q8N910 161 aa11.92□□□□□ -0.5
HERPUD2-202ENST00000396081 SMR3AQ99954 134 aa11.92□□□□□ -0.5
HERPUD2-202ENST00000396081 IGKV2D-24A0A075B6R9 120 aa11.92□□□□□ -0.5
HERPUD2-202ENST00000396081 TEP1Q99973 2627 aaKnown RBP11.92□□□□□ -0.5
HERPUD2-202ENST00000396081 RPL37AP8A6NKH3 93 aa11.92□□□□□ -0.5
HERPUD2-202ENST00000396081 C1orf195Q5TG92 126 aa11.92□□□□□ -0.5
HERPUD2-202ENST00000396081 PRB2P02812 416 aaPredicted RBP11.91□□□□□ -0.5
HERPUD2-202ENST00000396081 PRR4Q16378 134 aa11.9□□□□□ -0.5
HERPUD2-202ENST00000396081 FASNP49327 2511 aaKnown RBP11.89□□□□□ -0.51
HERPUD2-202ENST00000396081 SERTAD4-AS1Q5TG53 156 aa11.89□□□□□ -0.51
HERPUD2-202ENST00000396081 C7orf33Q8WU49 177 aa11.89□□□□□ -0.51
HERPUD2-202ENST00000396081 PKD1L1Q8TDX9 2849 aa11.89□□□□□ -0.51
HERPUD2-202ENST00000396081 A0A1W2PNM2 257 aa11.88□□□□□ -0.51
HERPUD2-202ENST00000396081 SEC61GP60059 68 aa11.88□□□□□ -0.51
HERPUD2-202ENST00000396081 SYCNQ0VAF6 134 aa11.88□□□□□ -0.51
HERPUD2-202ENST00000396081 C1orf137Q5JT78 98 aa11.88□□□□□ -0.51
HERPUD2-202ENST00000396081 V9GYY9 64 aa11.87□□□□□ -0.51
HERPUD2-202ENST00000396081 TENM1Q9UKZ4 2725 aa11.87□□□□□ -0.51
HERPUD2-202ENST00000396081 ST20-AS1Q8NBB2 130 aa11.86□□□□□ -0.51
HERPUD2-202ENST00000396081 KRTAP26-1Q6PEX3 210 aa11.86□□□□□ -0.51
HERPUD2-202ENST00000396081 IGLV5-48A0A075B6I7 105 aa11.85□□□□□ -0.51
HERPUD2-202ENST00000396081 KCNQ1DNQ9H478 68 aa11.84□□□□□ -0.51
HERPUD2-202ENST00000396081 ETDCA0A1B0GVM5 59 aa11.83□□□□□ -0.52
HERPUD2-202ENST00000396081 RETNQ9HD89 108 aa11.83□□□□□ -0.52
HERPUD2-202ENST00000396081 ANK3Q12955 4377 aaKnown RBP11.82□□□□□ -0.52
HERPUD2-202ENST00000396081 C1orf64Q8NEQ6 169 aa11.82□□□□□ -0.52
HERPUD2-202ENST00000396081 hDV103S1A0JD37 113 aa11.81□□□□□ -0.52
HERPUD2-202ENST00000396081 K7EQZ3 153 aa11.81□□□□□ -0.52
HERPUD2-202ENST00000396081 FAM168BA1KXE4 195 aa11.8□□□□□ -0.52
HERPUD2-202ENST00000396081 PSPHP1O15172 72 aa11.8□□□□□ -0.52
HERPUD2-202ENST00000396081 Q9BRP9 147 aa11.8□□□□□ -0.52
HERPUD2-202ENST00000396081 DHRS4-AS1Q9P1J3 65 aa11.8□□□□□ -0.52
HERPUD2-202ENST00000396081 Q8NBF4 154 aa11.79□□□□□ -0.52
HERPUD2-202ENST00000396081 A0A0G2JQZ4 141 aa11.79□□□□□ -0.52
HERPUD2-202ENST00000396081 A0A1W2PNN7 141 aa11.79□□□□□ -0.52
HERPUD2-202ENST00000396081 Q6ZRX8 168 aa11.79□□□□□ -0.52
HERPUD2-202ENST00000396081 PDZD2O15018 2839 aa11.79□□□□□ -0.52
HERPUD2-202ENST00000396081 DEFB116Q30KQ4 102 aa11.78□□□□□ -0.52
HERPUD2-202ENST00000396081 DSCR10P59022 87 aa11.78□□□□□ -0.52
HERPUD2-202ENST00000396081 HELZ2Q9BYK8 2649 aaKnown RBP11.78□□□□□ -0.52
HERPUD2-202ENST00000396081 UBE2BP63146 152 aa11.78□□□□□ -0.52
HERPUD2-202ENST00000396081 BAHCC1Q9P281 2608 aa11.77□□□□□ -0.53
HERPUD2-202ENST00000396081 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.76□□□□□ -0.53
HERPUD2-202ENST00000396081 WFDC13Q8IUB5 93 aa11.74□□□□□ -0.53
HERPUD2-202ENST00000396081 TRRAPQ9Y4A5 3859 aa11.74□□□□□ -0.53
HERPUD2-202ENST00000396081 TENM4Q6N022 2769 aa11.73□□□□□ -0.53
HERPUD2-202ENST00000396081 HCG22E2RYF7 251 aa11.71□□□□□ -0.53
HERPUD2-202ENST00000396081 TNP2Q05952 138 aa11.71□□□□□ -0.54
HERPUD2-202ENST00000396081 LCE6AA0A183 80 aa11.7□□□□□ -0.54
HERPUD2-202ENST00000396081 IGLV1-50A0A075B6I6 118 aa11.69□□□□□ -0.54
HERPUD2-202ENST00000396081 ZCCHC13Q8WW36 166 aaKnown RBP11.69□□□□□ -0.54
HERPUD2-202ENST00000396081 A0A1B0GW54 56 aa11.69□□□□□ -0.54
HERPUD2-202ENST00000396081 PSCAO43653 123 aa11.69□□□□□ -0.54
HERPUD2-202ENST00000396081 TENM3Q9P273 2699 aa11.68□□□□□ -0.54
HERPUD2-202ENST00000396081 HECTD1Q9ULT8 2610 aa11.68□□□□□ -0.54
HERPUD2-202ENST00000396081 SPRR4Q96PI1 79 aa11.68□□□□□ -0.54
HERPUD2-202ENST00000396081 TRAV22A0A0B4J277 110 aa11.66□□□□□ -0.54
HERPUD2-202ENST00000396081 KRTAP4-16G5E9R7 235 aaPredicted RBP11.66□□□□□ -0.54
HERPUD2-202ENST00000396081 Q1T7F1 81 aa11.66□□□□□ -0.54
HERPUD2-202ENST00000396081 LINC01556Q5JQF7 62 aa11.66□□□□□ -0.54
HERPUD2-202ENST00000396081 LINC00476Q8WZB0 136 aa11.66□□□□□ -0.54
HERPUD2-202ENST00000396081 CASC10Q5T4H9 136 aa11.65□□□□□ -0.54
HERPUD2-202ENST00000396081 LINC00208Q96KT6 92 aa11.64□□□□□ -0.55
HERPUD2-202ENST00000396081 DEFB131BA0A096LNP1 70 aa11.63□□□□□ -0.55
HERPUD2-202ENST00000396081 H3BNG1 76 aa11.63□□□□□ -0.55
HERPUD2-202ENST00000396081 MP68P56378 58 aa11.63□□□□□ -0.55
HERPUD2-202ENST00000396081 MRPL55Q7Z7F7 128 aaKnown RBP11.63□□□□□ -0.55
HERPUD2-202ENST00000396081 A8MUN3 132 aa11.63□□□□□ -0.55
HERPUD2-202ENST00000396081 INAFM1C9JVW0 142 aa11.63□□□□□ -0.55
HERPUD2-202ENST00000396081 A0A087WSZ3 146 aa11.62□□□□□ -0.55
HERPUD2-202ENST00000396081 RPL37AP61513 92 aaKnown RBP11.62□□□□□ -0.55
HERPUD2-202ENST00000396081 OXLD1Q5BKU9 147 aa11.62□□□□□ -0.55
HERPUD2-202ENST00000396081 SPRR1AP35321 89 aa11.61□□□□□ -0.55
HERPUD2-202ENST00000396081 KRTAP7-1Q8IUC3 87 aa11.61□□□□□ -0.55
HERPUD2-202ENST00000396081 PRR15Q8IV56 129 aa11.6□□□□□ -0.55
HERPUD2-202ENST00000396081 NSD1Q96L73 2696 aaPredicted RBP11.59□□□□□ -0.55
HERPUD2-202ENST00000396081 OTOGQ6ZRI0 2925 aa11.59□□□□□ -0.55
HERPUD2-202ENST00000396081 FLNBO75369 2602 aaKnown RBP11.59□□□□□ -0.55
HERPUD2-202ENST00000396081 PMAIP1Q13794 54 aa11.59□□□□□ -0.55
HERPUD2-202ENST00000396081 IGFL1Q6UW32 110 aa11.59□□□□□ -0.55
HERPUD2-202ENST00000396081 NDUFB1O75438 58 aa11.58□□□□□ -0.56
HERPUD2-202ENST00000396081 TLX1NBP0CAT3 122 aa11.58□□□□□ -0.56
HERPUD2-202ENST00000396081 CYP4F30PQ9H0H9 118 aa11.58□□□□□ -0.56
HERPUD2-202ENST00000396081 PRLHP81277 87 aa11.57□□□□□ -0.56
HERPUD2-202ENST00000396081 REG3GQ6UW15 175 aa11.57□□□□□ -0.56
HERPUD2-202ENST00000396081 PLA2G2DQ9UNK4 145 aa11.57□□□□□ -0.56
HERPUD2-202ENST00000396081 B9D2Q9BPU9 175 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms