RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 ETDCA0A1B0GVM5 59 aa7.73□□□□□ -1.17
SCAF11-203ENST00000395453 COLCA2A8K830 154 aa7.73□□□□□ -1.17
SCAF11-203ENST00000395453 DPM2O94777 84 aa7.73□□□□□ -1.17
SCAF11-203ENST00000395453 FABP4P15090 132 aa7.72□□□□□ -1.17
SCAF11-203ENST00000395453 NMUP48645 174 aa7.72□□□□□ -1.17
SCAF11-203ENST00000395453 LINC00483Q53H64 154 aa7.72□□□□□ -1.17
SCAF11-203ENST00000395453 DAND5Q8N907 189 aa7.72□□□□□ -1.17
SCAF11-203ENST00000395453 B5MCH6 92 aa7.71□□□□□ -1.18
SCAF11-203ENST00000395453 IGKCP01834 107 aa7.71□□□□□ -1.18
SCAF11-203ENST00000395453 SLC7A5P1Q8MH63 180 aa7.71□□□□□ -1.18
SCAF11-203ENST00000395453 HERVK_113P61574 105 aa7.7□□□□□ -1.18
SCAF11-203ENST00000395453 PMCHL2Q9BQD1 86 aa7.7□□□□□ -1.18
SCAF11-203ENST00000395453 NDUFC2O95298 119 aa7.69□□□□□ -1.18
SCAF11-203ENST00000395453 DDTP30046 118 aa7.69□□□□□ -1.18
SCAF11-203ENST00000395453 S100A12P80511 92 aa7.69□□□□□ -1.18
SCAF11-203ENST00000395453 Q8NBF4 154 aa7.69□□□□□ -1.18
SCAF11-203ENST00000395453 PPDPFQ9H3Y8 114 aa7.69□□□□□ -1.18
SCAF11-203ENST00000395453 ERC2-IT1O76042 136 aa7.68□□□□□ -1.18
SCAF11-203ENST00000395453 IGLV6-57P01721 117 aa7.68□□□□□ -1.18
SCAF11-203ENST00000395453 LGALS3P17931 250 aaKnown RBP7.68□□□□□ -1.18
SCAF11-203ENST00000395453 LINC01547P58512 204 aaPredicted RBP7.68□□□□□ -1.18
SCAF11-203ENST00000395453 FP248Q71RG6 208 aaPredicted RBP7.68□□□□□ -1.18
SCAF11-203ENST00000395453 Q9BRP9 147 aa7.68□□□□□ -1.18
SCAF11-203ENST00000395453 SPANXB1Q9NS25 103 aaPredicted RBP7.68□□□□□ -1.18
SCAF11-203ENST00000395453 SPINK1P00995 79 aa7.67□□□□□ -1.18
SCAF11-203ENST00000395453 ADAMTSL4-AS1Q5T5F5 129 aa7.66□□□□□ -1.18
SCAF11-203ENST00000395453 GAGE2AQ6NT46 116 aa7.66□□□□□ -1.18
SCAF11-203ENST00000395453 SOSTDC1Q6X4U4 206 aa7.66□□□□□ -1.18
SCAF11-203ENST00000395453 Q6ZRX8 168 aa7.66□□□□□ -1.18
SCAF11-203ENST00000395453 A0A0J9YXY3 114 aa7.65□□□□□ -1.18
SCAF11-203ENST00000395453 E9PLD3 99 aa7.65□□□□□ -1.18
SCAF11-203ENST00000395453 MIEN1Q9BRT3 115 aa7.65□□□□□ -1.18
SCAF11-203ENST00000395453 SSBP3-AS1Q7Z2R9 100 aa7.64□□□□□ -1.19
SCAF11-203ENST00000395453 S100A7L2Q5SY68 101 aa7.63□□□□□ -1.19
SCAF11-203ENST00000395453 SYS1-DBNDD2H3BUS1 97 aa7.62□□□□□ -1.19
SCAF11-203ENST00000395453 RPS29P62273 56 aaKnown RBP7.62□□□□□ -1.19
SCAF11-203ENST00000395453 KRTAP13-3Q3SY46 172 aa7.62□□□□□ -1.19
SCAF11-203ENST00000395453 TRAV23DV6A0A075B6W5 121 aa7.61□□□□□ -1.19
SCAF11-203ENST00000395453 HIST1H2BKO60814 126 aa7.61□□□□□ -1.19
SCAF11-203ENST00000395453 HIST1H2BJP06899 126 aa7.61□□□□□ -1.19
SCAF11-203ENST00000395453 HIST1H2BOP23527 126 aa7.61□□□□□ -1.19
SCAF11-203ENST00000395453 HIST1H2BBP33778 126 aa7.61□□□□□ -1.19
SCAF11-203ENST00000395453 HIST1H2BDP58876 126 aa7.61□□□□□ -1.19
SCAF11-203ENST00000395453 HIST1H2BCP62807 126 aa7.61□□□□□ -1.19
SCAF11-203ENST00000395453 MOBPQ13875 183 aa7.61□□□□□ -1.19
SCAF11-203ENST00000395453 JOSD1Q15040 202 aaPredicted RBP7.61□□□□□ -1.19
SCAF11-203ENST00000395453 HIST2H2BEQ16778 126 aa7.61□□□□□ -1.19
SCAF11-203ENST00000395453 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.61□□□□□ -1.19
SCAF11-203ENST00000395453 HIST1H2BHQ93079 126 aa7.61□□□□□ -1.19
SCAF11-203ENST00000395453 LITAFQ99732 161 aa7.61□□□□□ -1.19
SCAF11-203ENST00000395453 HIST1H2BNQ99877 126 aa7.61□□□□□ -1.19
SCAF11-203ENST00000395453 HIST1H2BMQ99879 126 aa7.61□□□□□ -1.19
SCAF11-203ENST00000395453 IGLV9-49A0A0B4J1Y8 123 aa7.6□□□□□ -1.19
SCAF11-203ENST00000395453 ZNF73O43830 326 aaPredicted RBP7.6□□□□□ -1.19
SCAF11-203ENST00000395453 NPC2P61916 151 aa7.6□□□□□ -1.19
SCAF11-203ENST00000395453 LINC01545Q5VT33 79 aa7.6□□□□□ -1.19
SCAF11-203ENST00000395453 C5orf52A6NGY3 159 aa7.59□□□□□ -1.19
SCAF11-203ENST00000395453 Q8N377 158 aa7.59□□□□□ -1.19
SCAF11-203ENST00000395453 TIMM17BO60830 172 aa7.58□□□□□ -1.2
SCAF11-203ENST00000395453 LINC00308Q8TCZ7 52 aa7.58□□□□□ -1.2
SCAF11-203ENST00000395453 CBY1Q9Y3M2 126 aa7.58□□□□□ -1.2
SCAF11-203ENST00000395453 PET117Q6UWS5 81 aa7.57□□□□□ -1.2
SCAF11-203ENST00000395453 SPANXCQ9NY87 97 aa7.57□□□□□ -1.2
SCAF11-203ENST00000395453 ASB16-AS1Q495Z4 193 aa7.55□□□□□ -1.2
SCAF11-203ENST00000395453 ST20-AS1Q8NBB2 130 aa7.55□□□□□ -1.2
SCAF11-203ENST00000395453 SLC25A20O43772 301 aa7.54□□□□□ -1.2
SCAF11-203ENST00000395453 HINT1P49773 126 aaPredicted RBP7.54□□□□□ -1.2
SCAF11-203ENST00000395453 ZNF815PA8K554 130 aa7.53□□□□□ -1.2
SCAF11-203ENST00000395453 C3orf79P0CE67 100 aa7.53□□□□□ -1.2
SCAF11-203ENST00000395453 SPRR1BP22528 89 aa7.53□□□□□ -1.2
SCAF11-203ENST00000395453 COA6Q5JTJ3 125 aaKnown RBP7.52□□□□□ -1.2
SCAF11-203ENST00000395453 OR13C6PQ8NH95 151 aa7.52□□□□□ -1.2
SCAF11-203ENST00000395453 SPANXDQ9BXN6 97 aa7.52□□□□□ -1.2
SCAF11-203ENST00000395453 TTTY13Q9BZ97 58 aa7.52□□□□□ -1.2
SCAF11-203ENST00000395453 C9orf153Q5TBE3 101 aa7.52□□□□□ -1.21
SCAF11-203ENST00000395453 LINC00518Q8N0U6 118 aa7.52□□□□□ -1.21
SCAF11-203ENST00000395453 DHRS4-AS1Q9P1J3 65 aa7.52□□□□□ -1.21
SCAF11-203ENST00000395453 ELOF1P60002 83 aaKnown RBP7.5□□□□□ -1.21
SCAF11-203ENST00000395453 KRTAP4-1Q9BYQ7 146 aa7.5□□□□□ -1.21
SCAF11-203ENST00000395453 SEC61BP60468 96 aaKnown RBP7.49□□□□□ -1.21
SCAF11-203ENST00000395453 SLC25A34Q6PIV7 304 aa7.48□□□□□ -1.21
SCAF11-203ENST00000395453 TRBV7-6A0A0J9YX20 115 aa7.47□□□□□ -1.21
SCAF11-203ENST00000395453 COX7BP24311 80 aa7.47□□□□□ -1.21
SCAF11-203ENST00000395453 KRTDAPP60985 99 aa7.47□□□□□ -1.21
SCAF11-203ENST00000395453 C6orf99Q4VX62 202 aa7.47□□□□□ -1.21
SCAF11-203ENST00000395453 LAMTOR3Q9UHA4 124 aa7.46□□□□□ -1.22
SCAF11-203ENST00000395453 IFITM1P13164 125 aa7.45□□□□□ -1.22
SCAF11-203ENST00000395453 ANKRD39Q53RE8 183 aa7.45□□□□□ -1.22
SCAF11-203ENST00000395453 SCGB1D4Q6XE38 83 aa7.45□□□□□ -1.22
SCAF11-203ENST00000395453 Q6ZVH6 145 aa7.44□□□□□ -1.22
SCAF11-203ENST00000395453 COPS9Q8WXC6 57 aa7.44□□□□□ -1.22
SCAF11-203ENST00000395453 KRTAP9-8Q9BYQ0 159 aa7.44□□□□□ -1.22
SCAF11-203ENST00000395453 C20orf202A1L168 122 aa7.43□□□□□ -1.22
SCAF11-203ENST00000395453 LIMD2Q9BT23 127 aa7.43□□□□□ -1.22
SCAF11-203ENST00000395453 TEX49A0A1B0GTD5 131 aa7.42□□□□□ -1.22
SCAF11-203ENST00000395453 CFC1BP0CG36 223 aa7.42□□□□□ -1.22
SCAF11-203ENST00000395453 CD164Q04900 197 aa7.42□□□□□ -1.22
SCAF11-203ENST00000395453 TAL2Q16559 108 aa7.42□□□□□ -1.22
SCAF11-203ENST00000395453 A0A1B0GWB2 263 aa7.41□□□□□ -1.22
SCAF11-203ENST00000395453 HRCT1Q6UXD1 115 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms