RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 A0A1W2PNN7 141 aa10.4□□□□□ -0.74
SMARCD1-202ENST00000394963 ST20-AS1Q8NBB2 130 aa10.4□□□□□ -0.74
SMARCD1-202ENST00000394963 SMCR5Q8TEV8 140 aa10.4□□□□□ -0.74
SMARCD1-202ENST00000394963 MRPL55Q7Z7F7 128 aaKnown RBP10.39□□□□□ -0.75
SMARCD1-202ENST00000394963 GVQW2A0A096LPI5 108 aaPredicted RBP10.38□□□□□ -0.75
SMARCD1-202ENST00000394963 A0A1B0GX51 115 aa10.38□□□□□ -0.75
SMARCD1-202ENST00000394963 NUPR2A6NF83 97 aa10.37□□□□□ -0.75
SMARCD1-202ENST00000394963 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.37□□□□□ -0.75
SMARCD1-202ENST00000394963 IGLV6-57P01721 117 aa10.37□□□□□ -0.75
SMARCD1-202ENST00000394963 PHF5AQ7RTV0 110 aaKnown RBP10.37□□□□□ -0.75
SMARCD1-202ENST00000394963 LRCOL1A6NCL2 159 aa10.36□□□□□ -0.75
SMARCD1-202ENST00000394963 DEFB116Q30KQ4 102 aa10.36□□□□□ -0.75
SMARCD1-202ENST00000394963 Q8N9L7 120 aa10.36□□□□□ -0.75
SMARCD1-202ENST00000394963 NREPQ16612 68 aa10.35□□□□□ -0.75
SMARCD1-202ENST00000394963 CCDC179H3BU77 68 aa10.35□□□□□ -0.75
SMARCD1-202ENST00000394963 C9orf153Q5TBE3 101 aa10.35□□□□□ -0.75
SMARCD1-202ENST00000394963 COL7A1Q02388 2944 aa10.34□□□□□ -0.75
SMARCD1-202ENST00000394963 HRCT1Q6UXD1 115 aa10.33□□□□□ -0.76
SMARCD1-202ENST00000394963 NBDYA0A0U1RRE5 68 aa10.32□□□□□ -0.76
SMARCD1-202ENST00000394963 KRTAP26-1Q6PEX3 210 aa10.32□□□□□ -0.76
SMARCD1-202ENST00000394963 ANK2Q01484 3957 aa10.32□□□□□ -0.76
SMARCD1-202ENST00000394963 UPK3BQ9BT76 320 aa10.31□□□□□ -0.76
SMARCD1-202ENST00000394963 REG3GQ6UW15 175 aa10.31□□□□□ -0.76
SMARCD1-202ENST00000394963 APLNQ9ULZ1 77 aa10.31□□□□□ -0.76
SMARCD1-202ENST00000394963 ELOF1P60002 83 aaKnown RBP10.29□□□□□ -0.76
SMARCD1-202ENST00000394963 C14orf177Q52M58 125 aa10.29□□□□□ -0.76
SMARCD1-202ENST00000394963 FAM240AA0A1B0GVK7 77 aa10.28□□□□□ -0.76
SMARCD1-202ENST00000394963 MUC7Q8TAX7 377 aa10.28□□□□□ -0.76
SMARCD1-202ENST00000394963 IGLV9-49A0A0B4J1Y8 123 aa10.28□□□□□ -0.76
SMARCD1-202ENST00000394963 ERC2-IT1O76042 136 aa10.26□□□□□ -0.77
SMARCD1-202ENST00000394963 SRRM2Q9UQ35 2752 aaKnown RBP10.25□□□□□ -0.77
SMARCD1-202ENST00000394963 C1orf137Q5JT78 98 aa10.24□□□□□ -0.77
SMARCD1-202ENST00000394963 NHLRC4P0CG21 123 aaPredicted RBP10.24□□□□□ -0.77
SMARCD1-202ENST00000394963 BPY2O14599 106 aa10.23□□□□□ -0.77
SMARCD1-202ENST00000394963 LINC00528Q8N1L1 170 aa10.23□□□□□ -0.77
SMARCD1-202ENST00000394963 DHRS4-AS1Q9P1J3 65 aa10.23□□□□□ -0.77
SMARCD1-202ENST00000394963 Q6ZVQ6 151 aa10.22□□□□□ -0.77
SMARCD1-202ENST00000394963 FBN3Q75N90 2809 aa10.22□□□□□ -0.77
SMARCD1-202ENST00000394963 MEGF8Q7Z7M0 2845 aa10.22□□□□□ -0.77
SMARCD1-202ENST00000394963 Q6ZRX8 168 aa10.21□□□□□ -0.77
SMARCD1-202ENST00000394963 IGLV5-52A0A0A0MRZ9 124 aa10.21□□□□□ -0.78
SMARCD1-202ENST00000394963 IGLV1-50A0A075B6I6 118 aa10.2□□□□□ -0.78
SMARCD1-202ENST00000394963 C1orf134Q5TEV5 83 aa10.2□□□□□ -0.78
SMARCD1-202ENST00000394963 Q6ZQT0 140 aa10.19□□□□□ -0.78
SMARCD1-202ENST00000394963 C20orf197Q8N268 126 aa10.19□□□□□ -0.78
SMARCD1-202ENST00000394963 C16orf90A8MZG2 172 aa10.18□□□□□ -0.78
SMARCD1-202ENST00000394963 DNHD1Q96M86 4753 aa10.17□□□□□ -0.78
SMARCD1-202ENST00000394963 Q6JHZ5 121 aa10.17□□□□□ -0.78
SMARCD1-202ENST00000394963 ANAPC11Q9NYG5 84 aa10.17□□□□□ -0.78
SMARCD1-202ENST00000394963 Q8N377 158 aa10.17□□□□□ -0.78
SMARCD1-202ENST00000394963 KCNQ1DNQ9H478 68 aa10.17□□□□□ -0.78
SMARCD1-202ENST00000394963 A0A087WSZ3 146 aa10.16□□□□□ -0.78
SMARCD1-202ENST00000394963 LINC01547P58512 204 aaPredicted RBP10.16□□□□□ -0.78
SMARCD1-202ENST00000394963 PRYO14603 147 aa10.16□□□□□ -0.78
SMARCD1-202ENST00000394963 Q9BRP9 147 aa10.16□□□□□ -0.78
SMARCD1-202ENST00000394963 ATOX1O00244 68 aa10.15□□□□□ -0.78
SMARCD1-202ENST00000394963 PDE6GP18545 87 aa10.15□□□□□ -0.78
SMARCD1-202ENST00000394963 EPM2AB3EWF7 344 aa10.15□□□□□ -0.78
SMARCD1-202ENST00000394963 SNURFQ9Y675 71 aa10.15□□□□□ -0.78
SMARCD1-202ENST00000394963 RTL8CO15255 209 aa10.14□□□□□ -0.79
SMARCD1-202ENST00000394963 WFDC13Q8IUB5 93 aa10.13□□□□□ -0.79
SMARCD1-202ENST00000394963 H0Y9J4 135 aa10.13□□□□□ -0.79
SMARCD1-202ENST00000394963 SPINK6Q6UWN8 80 aa10.13□□□□□ -0.79
SMARCD1-202ENST00000394963 PANO1I0J062 215 aa10.11□□□□□ -0.79
SMARCD1-202ENST00000394963 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.1□□□□□ -0.79
SMARCD1-202ENST00000394963 TRBV7-7A0A0K0K1E9 115 aa10.1□□□□□ -0.79
SMARCD1-202ENST00000394963 F8WDY8 70 aa10.1□□□□□ -0.79
SMARCD1-202ENST00000394963 A0A087WTM6 91 aa10.09□□□□□ -0.79
SMARCD1-202ENST00000394963 C9orf163Q8N9P6 203 aa10.09□□□□□ -0.79
SMARCD1-202ENST00000394963 Q6Q795 121 aa10.08□□□□□ -0.8
SMARCD1-202ENST00000394963 IMUPQ9GZP8 106 aa10.08□□□□□ -0.8
SMARCD1-202ENST00000394963 LINC00476Q8WZB0 136 aa10.08□□□□□ -0.8
SMARCD1-202ENST00000394963 H3BQ85 93 aa10.07□□□□□ -0.8
SMARCD1-202ENST00000394963 TLX1NBP0CAT3 122 aa10.06□□□□□ -0.8
SMARCD1-202ENST00000394963 TNP2Q05952 138 aa10.06□□□□□ -0.8
SMARCD1-202ENST00000394963 FAM30AQ9NZY2 134 aa10.06□□□□□ -0.8
SMARCD1-202ENST00000394963 LINC00474Q9P2X8 69 aa10.05□□□□□ -0.8
SMARCD1-202ENST00000394963 NDUFS5O43920 106 aa10.05□□□□□ -0.8
SMARCD1-202ENST00000394963 KRTAP7-1Q8IUC3 87 aa10.05□□□□□ -0.8
SMARCD1-202ENST00000394963 RPL37AP61513 92 aaKnown RBP10.05□□□□□ -0.8
SMARCD1-202ENST00000394963 UQCRQO14949 82 aa10.03□□□□□ -0.8
SMARCD1-202ENST00000394963 CDK2AP2O75956 126 aa10.03□□□□□ -0.8
SMARCD1-202ENST00000394963 TRBV7-6A0A0J9YX20 115 aa10.02□□□□□ -0.8
SMARCD1-202ENST00000394963 KRTAP11-1Q8IUC1 163 aa10.02□□□□□ -0.81
SMARCD1-202ENST00000394963 CIRBP-AS1Q8TBR5 109 aa10.02□□□□□ -0.81
SMARCD1-202ENST00000394963 COX7CP15954 63 aa10.01□□□□□ -0.81
SMARCD1-202ENST00000394963 PRR4Q16378 134 aa10.01□□□□□ -0.81
SMARCD1-202ENST00000394963 SERP2Q8N6R1 65 aa10.01□□□□□ -0.81
SMARCD1-202ENST00000394963 OBSCN-AS1Q96MR7 158 aa10.01□□□□□ -0.81
SMARCD1-202ENST00000394963 HUWE1Q7Z6Z7 4374 aaKnown RBP10□□□□□ -0.81
SMARCD1-202ENST00000394963 LOC110117498A0A087WWA1 95 aa10□□□□□ -0.81
SMARCD1-202ENST00000394963 TRBV7-4A0A0J9YYF1 115 aa10□□□□□ -0.81
SMARCD1-202ENST00000394963 CNBPP62633 177 aaKnown RBP10□□□□□ -0.81
SMARCD1-202ENST00000394963 ATP5EP2Q5VTU8 51 aa10□□□□□ -0.81
SMARCD1-202ENST00000394963 A0A1W2PNM2 257 aa9.99□□□□□ -0.81
SMARCD1-202ENST00000394963 LINC01600Q96MT4 127 aa9.99□□□□□ -0.81
SMARCD1-202ENST00000394963 WWC2-AS2Q96NR7 200 aa9.99□□□□□ -0.81
SMARCD1-202ENST00000394963 MOBPQ13875 183 aa9.98□□□□□ -0.81
SMARCD1-202ENST00000394963 PKIGQ9Y2B9 76 aa9.96□□□□□ -0.81
SMARCD1-202ENST00000394963 LYSTQ99698 3801 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms