RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 BOD1L2Q8IYS8 172 aa3.41□□□□□ -1.86
SMARCAD1-203ENST00000394961 DHRS4-AS1Q9P1J3 65 aa3.41□□□□□ -1.86
SMARCAD1-203ENST00000394961 RPS10P5Q9NQ39 176 aa3.41□□□□□ -1.86
SMARCAD1-203ENST00000394961 CRCT1Q9UGL9 99 aa3.41□□□□□ -1.86
SMARCAD1-203ENST00000394961 MUC2Q02817 5179 aa3.41□□□□□ -1.86
SMARCAD1-203ENST00000394961 TRAV23DV6A0A075B6W5 121 aa3.4□□□□□ -1.86
SMARCAD1-203ENST00000394961 MT1HP80294 61 aa3.4□□□□□ -1.86
SMARCAD1-203ENST00000394961 LORP23490 312 aaPredicted RBP3.4□□□□□ -1.86
SMARCAD1-203ENST00000394961 HERVK_113P61574 105 aa3.4□□□□□ -1.86
SMARCAD1-203ENST00000394961 SOSTDC1Q6X4U4 206 aa3.4□□□□□ -1.86
SMARCAD1-203ENST00000394961 E9PLD3 99 aa3.4□□□□□ -1.87
SMARCAD1-203ENST00000394961 ERC2-IT1O76042 136 aa3.4□□□□□ -1.87
SMARCAD1-203ENST00000394961 TSPEAR-AS2P59090 65 aa3.4□□□□□ -1.87
SMARCAD1-203ENST00000394961 J3QQQ9 107 aa3.39□□□□□ -1.87
SMARCAD1-203ENST00000394961 MOBPQ13875 183 aa3.39□□□□□ -1.87
SMARCAD1-203ENST00000394961 HSPB8Q9UJY1 196 aa3.39□□□□□ -1.87
SMARCAD1-203ENST00000394961 IGLV5-48A0A075B6I7 105 aa3.39□□□□□ -1.87
SMARCAD1-203ENST00000394961 NCR3O14931 201 aa3.39□□□□□ -1.87
SMARCAD1-203ENST00000394961 SPANXDQ9BXN6 97 aa3.39□□□□□ -1.87
SMARCAD1-203ENST00000394961 ZNF73O43830 326 aaPredicted RBP3.39□□□□□ -1.87
SMARCAD1-203ENST00000394961 ATP6V1G1O75348 118 aa3.39□□□□□ -1.87
SMARCAD1-203ENST00000394961 DPM2O94777 84 aa3.39□□□□□ -1.87
SMARCAD1-203ENST00000394961 NDUFA6P56556 154 aa3.39□□□□□ -1.87
SMARCAD1-203ENST00000394961 LINC00310P59036 64 aa3.39□□□□□ -1.87
SMARCAD1-203ENST00000394961 LITAFQ99732 161 aa3.39□□□□□ -1.87
SMARCAD1-203ENST00000394961 ELOF1P60002 83 aaKnown RBP3.38□□□□□ -1.87
SMARCAD1-203ENST00000394961 NDUFA5Q16718 116 aa3.38□□□□□ -1.87
SMARCAD1-203ENST00000394961 PMCHL1Q16048 86 aa3.38□□□□□ -1.87
SMARCAD1-203ENST00000394961 SPANXCQ9NY87 97 aa3.38□□□□□ -1.87
SMARCAD1-203ENST00000394961 IGKCP01834 107 aa3.37□□□□□ -1.87
SMARCAD1-203ENST00000394961 GAGE2AQ6NT46 116 aa3.37□□□□□ -1.87
SMARCAD1-203ENST00000394961 A4D1N5 150 aa3.36□□□□□ -1.87
SMARCAD1-203ENST00000394961 HSBP1O75506 76 aa3.36□□□□□ -1.87
SMARCAD1-203ENST00000394961 LEPROTL1O95214 131 aa3.36□□□□□ -1.87
SMARCAD1-203ENST00000394961 KRTAP10-6P60371 365 aaPredicted RBP3.36□□□□□ -1.87
SMARCAD1-203ENST00000394961 RPL37P61927 97 aaKnown RBP3.36□□□□□ -1.87
SMARCAD1-203ENST00000394961 Q6ZVH6 145 aa3.36□□□□□ -1.87
SMARCAD1-203ENST00000394961 LINC00518Q8N0U6 118 aa3.36□□□□□ -1.87
SMARCAD1-203ENST00000394961 COPS9Q8WXC6 57 aa3.36□□□□□ -1.87
SMARCAD1-203ENST00000394961 IGLV8-61A0A075B6I0 122 aa3.36□□□□□ -1.87
SMARCAD1-203ENST00000394961 AKR1D1P51857 326 aa3.36□□□□□ -1.87
SMARCAD1-203ENST00000394961 LAMTOR3Q9UHA4 124 aa3.36□□□□□ -1.87
SMARCAD1-203ENST00000394961 LGALS3P17931 250 aaKnown RBP3.35□□□□□ -1.87
SMARCAD1-203ENST00000394961 PRO1933Q9H354 126 aa3.35□□□□□ -1.87
SMARCAD1-203ENST00000394961 SCGB1D1O95968 90 aa3.35□□□□□ -1.87
SMARCAD1-203ENST00000394961 HINT1P49773 126 aaPredicted RBP3.35□□□□□ -1.87
SMARCAD1-203ENST00000394961 S100A7L2Q5SY68 101 aa3.35□□□□□ -1.87
SMARCAD1-203ENST00000394961 LINC00308Q8TCZ7 52 aa3.35□□□□□ -1.87
SMARCAD1-203ENST00000394961 A0A1B0GWB2 263 aa3.34□□□□□ -1.87
SMARCAD1-203ENST00000394961 IFITM1P13164 125 aa3.34□□□□□ -1.87
SMARCAD1-203ENST00000394961 LINC01545Q5VT33 79 aa3.34□□□□□ -1.87
SMARCAD1-203ENST00000394961 SMIM29Q86T20 159 aa3.34□□□□□ -1.87
SMARCAD1-203ENST00000394961 TEX49A0A1B0GTD5 131 aa3.34□□□□□ -1.87
SMARCAD1-203ENST00000394961 PPDPFLQ8WWR9 84 aa3.34□□□□□ -1.87
SMARCAD1-203ENST00000394961 MIEN1Q9BRT3 115 aa3.34□□□□□ -1.87
SMARCAD1-203ENST00000394961 IGLV9-49A0A0B4J1Y8 123 aa3.34□□□□□ -1.88
SMARCAD1-203ENST00000394961 FLGP20930 4061 aaPredicted RBP3.34□□□□□ -1.88
SMARCAD1-203ENST00000394961 ADAMTSL4-AS1Q5T5F5 129 aa3.33□□□□□ -1.88
SMARCAD1-203ENST00000394961 PET117Q6UWS5 81 aa3.33□□□□□ -1.88
SMARCAD1-203ENST00000394961 SERF1AO75920 110 aa3.33□□□□□ -1.88
SMARCAD1-203ENST00000394961 HSBP1L1C9JCN9 74 aa3.33□□□□□ -1.88
SMARCAD1-203ENST00000394961 COX7BP24311 80 aa3.33□□□□□ -1.88
SMARCAD1-203ENST00000394961 COA6Q5JTJ3 125 aaKnown RBP3.32□□□□□ -1.88
SMARCAD1-203ENST00000394961 C9orf153Q5TBE3 101 aa3.32□□□□□ -1.88
SMARCAD1-203ENST00000394961 APOC3P02656 99 aa3.32□□□□□ -1.88
SMARCAD1-203ENST00000394961 C1orf195Q5TG92 126 aa3.32□□□□□ -1.88
SMARCAD1-203ENST00000394961 NHP2Q9NX24 153 aaKnown RBP3.32□□□□□ -1.88
SMARCAD1-203ENST00000394961 ZNF815PA8K554 130 aa3.32□□□□□ -1.88
SMARCAD1-203ENST00000394961 H7C2G1 150 aa3.32□□□□□ -1.88
SMARCAD1-203ENST00000394961 ST20-AS1Q8NBB2 130 aa3.31□□□□□ -1.88
SMARCAD1-203ENST00000394961 COLCA2A8K830 154 aa3.31□□□□□ -1.88
SMARCAD1-203ENST00000394961 SYS1-DBNDD2H3BUS1 97 aa3.31□□□□□ -1.88
SMARCAD1-203ENST00000394961 SNRPEP62304 92 aaKnown RBP3.31□□□□□ -1.88
SMARCAD1-203ENST00000394961 PCOTHQ58A44 107 aa3.31□□□□□ -1.88
SMARCAD1-203ENST00000394961 Q75L30 129 aa3.31□□□□□ -1.88
SMARCAD1-203ENST00000394961 TRGC2P03986 189 aa3.31□□□□□ -1.88
SMARCAD1-203ENST00000394961 Q6Q795 121 aa3.31□□□□□ -1.88
SMARCAD1-203ENST00000394961 A0A0U1RRA0 63 aa3.3□□□□□ -1.88
SMARCAD1-203ENST00000394961 EIF4EBP3O60516 100 aaPredicted RBP3.3□□□□□ -1.88
SMARCAD1-203ENST00000394961 Q6JHZ5 121 aa3.3□□□□□ -1.88
SMARCAD1-203ENST00000394961 CFC1P0CG37 223 aa3.29□□□□□ -1.88
SMARCAD1-203ENST00000394961 TCL1BO95988 128 aa3.29□□□□□ -1.88
SMARCAD1-203ENST00000394961 TRAV13-2A0A0B4J235 113 aa3.27□□□□□ -1.89
SMARCAD1-203ENST00000394961 C21orf62-AS1Q17RA5 79 aa3.27□□□□□ -1.89
SMARCAD1-203ENST00000394961 C6orf99Q4VX62 202 aa3.27□□□□□ -1.89
SMARCAD1-203ENST00000394961 S100A1P23297 94 aa3.26□□□□□ -1.89
SMARCAD1-203ENST00000394961 Q1RN00 199 aa3.26□□□□□ -1.89
SMARCAD1-203ENST00000394961 C20orf166-AS1Q96NR2 134 aa3.26□□□□□ -1.89
SMARCAD1-203ENST00000394961 TRBV7-7A0A0K0K1E9 115 aa3.26□□□□□ -1.89
SMARCAD1-203ENST00000394961 FABP4P15090 132 aa3.26□□□□□ -1.89
SMARCAD1-203ENST00000394961 TAL2Q16559 108 aa3.25□□□□□ -1.89
SMARCAD1-203ENST00000394961 A8MUU9 505 aa3.25□□□□□ -1.89
SMARCAD1-203ENST00000394961 HIST1H2BKO60814 126 aa3.25□□□□□ -1.89
SMARCAD1-203ENST00000394961 HIST1H2BJP06899 126 aa3.25□□□□□ -1.89
SMARCAD1-203ENST00000394961 HIST1H2BOP23527 126 aa3.25□□□□□ -1.89
SMARCAD1-203ENST00000394961 HIST1H2BBP33778 126 aa3.25□□□□□ -1.89
SMARCAD1-203ENST00000394961 HIST1H2BDP58876 126 aa3.25□□□□□ -1.89
SMARCAD1-203ENST00000394961 HIST1H2BCP62807 126 aa3.25□□□□□ -1.89
SMARCAD1-203ENST00000394961 HIST2H2BEQ16778 126 aa3.25□□□□□ -1.89
SMARCAD1-203ENST00000394961 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms