RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 CHCHD10Q8WYQ3 142 aaPredicted RBP14.59□□□□□ -0.07
CLDND1-202ENST00000394180 LINC00269Q8N2A0 174 aa14.58□□□□□ -0.07
CLDND1-202ENST00000394180 C9orf116Q5BN46 136 aaPredicted RBP14.58□□□□□ -0.08
CLDND1-202ENST00000394180 IGLV1-51P01701 117 aa14.57□□□□□ -0.08
CLDND1-202ENST00000394180 ANK2Q01484 3957 aa14.57□□□□□ -0.08
CLDND1-202ENST00000394180 HIGD2BQ4VC39 106 aa14.56□□□□□ -0.08
CLDND1-202ENST00000394180 LINC00612Q8N6U2 182 aa14.56□□□□□ -0.08
CLDND1-202ENST00000394180 CSNK1G2-AS1Q8NCQ2 148 aa14.56□□□□□ -0.08
CLDND1-202ENST00000394180 CMYA5Q8N3K9 4069 aa14.55□□□□□ -0.08
CLDND1-202ENST00000394180 TRAV22A0A0B4J277 110 aa14.53□□□□□ -0.08
CLDND1-202ENST00000394180 Q8N9L7 120 aa14.52□□□□□ -0.08
CLDND1-202ENST00000394180 GYPEP15421 78 aa14.51□□□□□ -0.09
CLDND1-202ENST00000394180 MDFIQ99750 246 aa14.51□□□□□ -0.09
CLDND1-202ENST00000394180 SPAG11BQ08648 103 aa14.49□□□□□ -0.09
CLDND1-202ENST00000394180 NDUFB1O75438 58 aa14.49□□□□□ -0.09
CLDND1-202ENST00000394180 REG3AQ06141 175 aa14.49□□□□□ -0.09
CLDND1-202ENST00000394180 UNQ6190/PRO20217Q6UXQ8 127 aa14.48□□□□□ -0.09
CLDND1-202ENST00000394180 WFDC10AQ9H1F0 79 aa14.48□□□□□ -0.09
CLDND1-202ENST00000394180 CLPSL2Q6UWE3 100 aa14.47□□□□□ -0.09
CLDND1-202ENST00000394180 LINC00528Q8N1L1 170 aa14.47□□□□□ -0.09
CLDND1-202ENST00000394180 ETDCA0A1B0GVM5 59 aa14.46□□□□□ -0.09
CLDND1-202ENST00000394180 C10orf25Q5T742 122 aa14.46□□□□□ -0.09
CLDND1-202ENST00000394180 SMIM29Q86T20 159 aa14.46□□□□□ -0.09
CLDND1-202ENST00000394180 UBE2BP63146 152 aa14.46□□□□□ -0.1
CLDND1-202ENST00000394180 PRO0255Q9UI72 69 aa14.46□□□□□ -0.1
CLDND1-202ENST00000394180 PSCAO43653 123 aa14.45□□□□□ -0.1
CLDND1-202ENST00000394180 IGLV5-48A0A075B6I7 105 aa14.43□□□□□ -0.1
CLDND1-202ENST00000394180 OXLD1Q5BKU9 147 aa14.42□□□□□ -0.1
CLDND1-202ENST00000394180 C19orf73Q9NVV2 129 aa14.42□□□□□ -0.1
CLDND1-202ENST00000394180 FAM30AQ9NZY2 134 aa14.42□□□□□ -0.1
CLDND1-202ENST00000394180 M0R378 163 aa14.42□□□□□ -0.1
CLDND1-202ENST00000394180 ANGP03950 147 aaKnown RBP14.4□□□□□ -0.1
CLDND1-202ENST00000394180 SYCNQ0VAF6 134 aa14.39□□□□□ -0.11
CLDND1-202ENST00000394180 PSPHP1O15172 72 aa14.39□□□□□ -0.11
CLDND1-202ENST00000394180 MRPL55Q7Z7F7 128 aaKnown RBP14.38□□□□□ -0.11
CLDND1-202ENST00000394180 VPREB1P12018 145 aa14.38□□□□□ -0.11
CLDND1-202ENST00000394180 UBE2AP49459 152 aa14.37□□□□□ -0.11
CLDND1-202ENST00000394180 KTN1-AS1Q86SY8 53 aa14.37□□□□□ -0.11
CLDND1-202ENST00000394180 KLK12Q9UKR0 248 aa14.37□□□□□ -0.11
CLDND1-202ENST00000394180 NOTCH1P46531 2555 aa14.37□□□□□ -0.11
CLDND1-202ENST00000394180 IGLV10-54A0A075B6I4 117 aa14.35□□□□□ -0.11
CLDND1-202ENST00000394180 LIMD2Q9BT23 127 aa14.35□□□□□ -0.11
CLDND1-202ENST00000394180 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.35□□□□□ -0.11
CLDND1-202ENST00000394180 NBEAL1Q6ZS30 2694 aa14.34□□□□□ -0.11
CLDND1-202ENST00000394180 LRCOL1A6NCL2 159 aa14.34□□□□□ -0.11
CLDND1-202ENST00000394180 C6orf48Q9UBA6 75 aa14.34□□□□□ -0.11
CLDND1-202ENST00000394180 NBEAL2Q6ZNJ1 2754 aa14.34□□□□□ -0.11
CLDND1-202ENST00000394180 DEFB130BP0DP73 79 aa14.33□□□□□ -0.12
CLDND1-202ENST00000394180 DEFB130AP0DP74 79 aa14.33□□□□□ -0.12
CLDND1-202ENST00000394180 KPRPQ5T749 579 aaPredicted RBP14.33□□□□□ -0.12
CLDND1-202ENST00000394180 Q5VV11 94 aa14.33□□□□□ -0.12
CLDND1-202ENST00000394180 LINC00588Q9Y4M8 146 aa14.33□□□□□ -0.12
CLDND1-202ENST00000394180 MGAM2Q2M2H8 2515 aa14.32□□□□□ -0.12
CLDND1-202ENST00000394180 C3orf84H3BNL1 204 aa14.32□□□□□ -0.12
CLDND1-202ENST00000394180 PRR34Q9NV39 138 aa14.31□□□□□ -0.12
CLDND1-202ENST00000394180 A8MUN3 132 aa14.31□□□□□ -0.12
CLDND1-202ENST00000394180 NDUFS5O43920 106 aa14.31□□□□□ -0.12
CLDND1-202ENST00000394180 KRTAP10-11P60412 298 aa14.31□□□□□ -0.12
CLDND1-202ENST00000394180 SPANXA2-OT1Q8N9U9 137 aa14.31□□□□□ -0.12
CLDND1-202ENST00000394180 DNAH3Q8TD57 4116 aa14.29□□□□□ -0.12
CLDND1-202ENST00000394180 SPRR4Q96PI1 79 aa14.28□□□□□ -0.12
CLDND1-202ENST00000394180 RETNQ9HD89 108 aa14.28□□□□□ -0.12
CLDND1-202ENST00000394180 EGFEM1PQ0D2K5 195 aa14.27□□□□□ -0.12
CLDND1-202ENST00000394180 ATP11AUNQ6ZP68 121 aa14.27□□□□□ -0.12
CLDND1-202ENST00000394180 Q9BRP9 147 aa14.27□□□□□ -0.13
CLDND1-202ENST00000394180 XAGE1AQ9HD64 81 aa14.27□□□□□ -0.13
CLDND1-202ENST00000394180 DNHD1Q96M86 4753 aa14.26□□□□□ -0.13
CLDND1-202ENST00000394180 H3BPC8 53 aa14.25□□□□□ -0.13
CLDND1-202ENST00000394180 B9D2Q9BPU9 175 aa14.25□□□□□ -0.13
CLDND1-202ENST00000394180 KCNQ1DNQ9H478 68 aa14.25□□□□□ -0.13
CLDND1-202ENST00000394180 Q8N377 158 aa14.25□□□□□ -0.13
CLDND1-202ENST00000394180 Q8NBF4 154 aa14.25□□□□□ -0.13
CLDND1-202ENST00000394180 DSCR10P59022 87 aa14.23□□□□□ -0.13
CLDND1-202ENST00000394180 PHF5AQ7RTV0 110 aaKnown RBP14.23□□□□□ -0.13
CLDND1-202ENST00000394180 A0A1W2PNM2 257 aa14.22□□□□□ -0.13
CLDND1-202ENST00000394180 TNP2Q05952 138 aa14.22□□□□□ -0.13
CLDND1-202ENST00000394180 HCG22E2RYF7 251 aa14.22□□□□□ -0.13
CLDND1-202ENST00000394180 MP68P56378 58 aa14.21□□□□□ -0.13
CLDND1-202ENST00000394180 LELP1Q5T871 98 aa14.21□□□□□ -0.13
CLDND1-202ENST00000394180 Q8N9P0 234 aaPredicted RBP14.21□□□□□ -0.13
CLDND1-202ENST00000394180 A0A096LPF7 62 aa14.2□□□□□ -0.14
CLDND1-202ENST00000394180 DHRS4-AS1Q9P1J3 65 aa14.2□□□□□ -0.14
CLDND1-202ENST00000394180 RBM12B-AS1Q9P1G2 102 aa14.19□□□□□ -0.14
CLDND1-202ENST00000394180 PRB2P02812 416 aaPredicted RBP14.19□□□□□ -0.14
CLDND1-202ENST00000394180 C16orf90A8MZG2 172 aa14.18□□□□□ -0.14
CLDND1-202ENST00000394180 Q75L30 129 aa14.18□□□□□ -0.14
CLDND1-202ENST00000394180 ST20-AS1Q8NBB2 130 aa14.17□□□□□ -0.14
CLDND1-202ENST00000394180 X6R8D5 127 aa14.17□□□□□ -0.14
CLDND1-202ENST00000394180 CHKB-CPT1BH3BT56 60 aa14.16□□□□□ -0.14
CLDND1-202ENST00000394180 C1orf137Q5JT78 98 aa14.16□□□□□ -0.14
CLDND1-202ENST00000394180 LOC101927531A0A1B0GV80 90 aa14.15□□□□□ -0.14
CLDND1-202ENST00000394180 LINC00208Q96KT6 92 aa14.15□□□□□ -0.14
CLDND1-202ENST00000394180 CAMK2N2Q96S95 79 aa14.14□□□□□ -0.15
CLDND1-202ENST00000394180 K7EQZ3 153 aa14.13□□□□□ -0.15
CLDND1-202ENST00000394180 DEFB135Q30KP9 77 aa14.13□□□□□ -0.15
CLDND1-202ENST00000394180 A6NN06 94 aa14.1□□□□□ -0.15
CLDND1-202ENST00000394180 APOC4P55056 127 aa14.1□□□□□ -0.15
CLDND1-202ENST00000394180 PRR4Q16378 134 aa14.07□□□□□ -0.16
CLDND1-202ENST00000394180 DEFB105AQ8NG35 78 aa14.06□□□□□ -0.16
CLDND1-202ENST00000394180 Q6ZRX8 168 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms