RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 ZNF706Q9Y5V0 76 aaPredicted RBP10.38□□□□□ -0.75
PDLIM7-205ENST00000393551 PMCHL2Q9BQD1 86 aa10.37□□□□□ -0.75
PDLIM7-205ENST00000393551 LINC00587B1AMM8 73 aa10.36□□□□□ -0.75
PDLIM7-205ENST00000393551 LEPROTO15243 131 aa10.36□□□□□ -0.75
PDLIM7-205ENST00000393551 Q8NBF4 154 aa10.36□□□□□ -0.75
PDLIM7-205ENST00000393551 ETDCA0A1B0GVM5 59 aa10.35□□□□□ -0.75
PDLIM7-205ENST00000393551 B5MCH6 92 aa10.35□□□□□ -0.75
PDLIM7-205ENST00000393551 ERC2-IT1O76042 136 aa10.35□□□□□ -0.75
PDLIM7-205ENST00000393551 HERVK_113P61574 105 aa10.35□□□□□ -0.75
PDLIM7-205ENST00000393551 LINC00483Q53H64 154 aa10.35□□□□□ -0.75
PDLIM7-205ENST00000393551 ATOH7Q8N100 152 aa10.35□□□□□ -0.75
PDLIM7-205ENST00000393551 J3QQQ9 107 aa10.33□□□□□ -0.76
PDLIM7-205ENST00000393551 SPATA45Q537H7 98 aa10.33□□□□□ -0.76
PDLIM7-205ENST00000393551 Q9BRP9 147 aa10.32□□□□□ -0.76
PDLIM7-205ENST00000393551 PAM16Q9Y3D7 125 aa10.32□□□□□ -0.76
PDLIM7-205ENST00000393551 TRBV10-2A0A0K0K1G8 114 aa10.31□□□□□ -0.76
PDLIM7-205ENST00000393551 E9PLD3 99 aa10.31□□□□□ -0.76
PDLIM7-205ENST00000393551 EIF4EBP3O60516 100 aaPredicted RBP10.31□□□□□ -0.76
PDLIM7-205ENST00000393551 DDTP30046 118 aa10.31□□□□□ -0.76
PDLIM7-205ENST00000393551 TSTD3H0UI37 97 aa10.3□□□□□ -0.76
PDLIM7-205ENST00000393551 C4orf48Q5BLP8 95 aa10.3□□□□□ -0.76
PDLIM7-205ENST00000393551 GAGE2AQ6NT46 116 aa10.3□□□□□ -0.76
PDLIM7-205ENST00000393551 FP248Q71RG6 208 aaPredicted RBP10.3□□□□□ -0.76
PDLIM7-205ENST00000393551 KRTAP13-3Q3SY46 172 aa10.29□□□□□ -0.76
PDLIM7-205ENST00000393551 DLEU1O43261 78 aa10.28□□□□□ -0.76
PDLIM7-205ENST00000393551 SOSTDC1Q6X4U4 206 aa10.28□□□□□ -0.76
PDLIM7-205ENST00000393551 Q6ZRX8 168 aa10.28□□□□□ -0.76
PDLIM7-205ENST00000393551 SPINK1P00995 79 aa10.27□□□□□ -0.77
PDLIM7-205ENST00000393551 IGLV6-57P01721 117 aa10.27□□□□□ -0.77
PDLIM7-205ENST00000393551 COX8AP10176 69 aa10.27□□□□□ -0.77
PDLIM7-205ENST00000393551 NMUP48645 174 aa10.27□□□□□ -0.77
PDLIM7-205ENST00000393551 ANKRD39Q53RE8 183 aa10.27□□□□□ -0.77
PDLIM7-205ENST00000393551 KRTAP9-2Q9BYQ4 174 aa10.27□□□□□ -0.77
PDLIM7-205ENST00000393551 SPANXB1Q9NS25 103 aaPredicted RBP10.27□□□□□ -0.77
PDLIM7-205ENST00000393551 ADAMTSL4-AS1Q5T5F5 129 aa10.26□□□□□ -0.77
PDLIM7-205ENST00000393551 UQCR10Q9UDW1 63 aa10.26□□□□□ -0.77
PDLIM7-205ENST00000393551 IGLV9-49A0A0B4J1Y8 123 aa10.25□□□□□ -0.77
PDLIM7-205ENST00000393551 NDUFC2O95298 119 aa10.25□□□□□ -0.77
PDLIM7-205ENST00000393551 LGALS3P17931 250 aaKnown RBP10.25□□□□□ -0.77
PDLIM7-205ENST00000393551 MOBPQ13875 183 aa10.25□□□□□ -0.77
PDLIM7-205ENST00000393551 SLC25A34Q6PIV7 304 aa10.25□□□□□ -0.77
PDLIM7-205ENST00000393551 MIEN1Q9BRT3 115 aa10.25□□□□□ -0.77
PDLIM7-205ENST00000393551 A0A0J9YXY3 114 aa10.23□□□□□ -0.77
PDLIM7-205ENST00000393551 NPC2P61916 151 aa10.23□□□□□ -0.77
PDLIM7-205ENST00000393551 Q8N377 158 aa10.23□□□□□ -0.77
PDLIM7-205ENST00000393551 SSBP3-AS1Q7Z2R9 100 aa10.22□□□□□ -0.77
PDLIM7-205ENST00000393551 S100A7L2Q5SY68 101 aa10.21□□□□□ -0.77
PDLIM7-205ENST00000393551 C14orf144Q96I85 54 aa10.21□□□□□ -0.77
PDLIM7-205ENST00000393551 PRO1933Q9H354 126 aa10.21□□□□□ -0.77
PDLIM7-205ENST00000393551 TRAV23DV6A0A075B6W5 121 aa10.2□□□□□ -0.78
PDLIM7-205ENST00000393551 RPS29P62273 56 aaKnown RBP10.2□□□□□ -0.78
PDLIM7-205ENST00000393551 KRTAP4-1Q9BYQ7 146 aa10.2□□□□□ -0.78
PDLIM7-205ENST00000393551 ASB16-AS1Q495Z4 193 aa10.19□□□□□ -0.78
PDLIM7-205ENST00000393551 ST20-AS1Q8NBB2 130 aa10.19□□□□□ -0.78
PDLIM7-205ENST00000393551 LITAFQ99732 161 aa10.19□□□□□ -0.78
PDLIM7-205ENST00000393551 ZNF73O43830 326 aaPredicted RBP10.18□□□□□ -0.78
PDLIM7-205ENST00000393551 HIGD1BQ9P298 99 aa10.18□□□□□ -0.78
PDLIM7-205ENST00000393551 PCP2Q8IVA1 136 aa10.17□□□□□ -0.78
PDLIM7-205ENST00000393551 ZNF815PA8K554 130 aa10.16□□□□□ -0.78
PDLIM7-205ENST00000393551 SLC25A20O43772 301 aa10.13□□□□□ -0.79
PDLIM7-205ENST00000393551 LINC00308Q8TCZ7 52 aa10.13□□□□□ -0.79
PDLIM7-205ENST00000393551 TIMM17BO60830 172 aa10.12□□□□□ -0.79
PDLIM7-205ENST00000393551 C9orf153Q5TBE3 101 aa10.12□□□□□ -0.79
PDLIM7-205ENST00000393551 SCGB1D4Q6XE38 83 aa10.12□□□□□ -0.79
PDLIM7-205ENST00000393551 TAL2Q16559 108 aa10.11□□□□□ -0.79
PDLIM7-205ENST00000393551 TTTY13Q9BZ97 58 aa10.11□□□□□ -0.79
PDLIM7-205ENST00000393551 SPANXCQ9NY87 97 aa10.11□□□□□ -0.79
PDLIM7-205ENST00000393551 PCP4L1A6NKN8 68 aa10.1□□□□□ -0.79
PDLIM7-205ENST00000393551 Q6ZVH6 145 aa10.1□□□□□ -0.79
PDLIM7-205ENST00000393551 C2orf91Q6ZV80 131 aa10.09□□□□□ -0.79
PDLIM7-205ENST00000393551 SPRR1BP22528 89 aa10.08□□□□□ -0.8
PDLIM7-205ENST00000393551 XP32Q5T750 250 aa10.08□□□□□ -0.8
PDLIM7-205ENST00000393551 SEC61BP60468 96 aaKnown RBP10.07□□□□□ -0.8
PDLIM7-205ENST00000393551 HSD52Q0P140 79 aa10.07□□□□□ -0.8
PDLIM7-205ENST00000393551 OR13C6PQ8NH95 151 aa10.07□□□□□ -0.8
PDLIM7-205ENST00000393551 COPS9Q8WXC6 57 aa10.07□□□□□ -0.8
PDLIM7-205ENST00000393551 M0R143 59 aa10.06□□□□□ -0.8
PDLIM7-205ENST00000393551 HINT1P49773 126 aaPredicted RBP10.05□□□□□ -0.8
PDLIM7-205ENST00000393551 IFITM1P13164 125 aa10.04□□□□□ -0.8
PDLIM7-205ENST00000393551 SPANXDQ9BXN6 97 aa10.04□□□□□ -0.8
PDLIM7-205ENST00000393551 CBY1Q9Y3M2 126 aa10.04□□□□□ -0.8
PDLIM7-205ENST00000393551 ELOF1P60002 83 aaKnown RBP10.03□□□□□ -0.8
PDLIM7-205ENST00000393551 HIST1H4GQ99525 98 aa10.03□□□□□ -0.8
PDLIM7-205ENST00000393551 DHRS4-AS1Q9P1J3 65 aa10.03□□□□□ -0.8
PDLIM7-205ENST00000393551 C6orf99Q4VX62 202 aa10.01□□□□□ -0.81
PDLIM7-205ENST00000393551 HRCT1Q6UXD1 115 aa10.01□□□□□ -0.81
PDLIM7-205ENST00000393551 CEND1Q8N111 149 aa10□□□□□ -0.81
PDLIM7-205ENST00000393551 TMEM238LA0A1B0GVL6 79 aa9.99□□□□□ -0.81
PDLIM7-205ENST00000393551 A6NJY4 79 aa9.99□□□□□ -0.81
PDLIM7-205ENST00000393551 COX7BP24311 80 aa9.99□□□□□ -0.81
PDLIM7-205ENST00000393551 LINC01547P58512 204 aaPredicted RBP9.98□□□□□ -0.81
PDLIM7-205ENST00000393551 BVES-AS1Q5T3Y7 98 aa9.97□□□□□ -0.81
PDLIM7-205ENST00000393551 LCE2CQ5TA81 110 aa9.97□□□□□ -0.81
PDLIM7-205ENST00000393551 LAMTOR3Q9UHA4 124 aa9.97□□□□□ -0.81
PDLIM7-205ENST00000393551 Q1RN00 199 aa9.96□□□□□ -0.82
PDLIM7-205ENST00000393551 KRTAP9-6A0A140TA67 174 aa9.95□□□□□ -0.82
PDLIM7-205ENST00000393551 A6NDN8 102 aa9.95□□□□□ -0.82
PDLIM7-205ENST00000393551 KRTAP19-2Q3LHN2 52 aa9.95□□□□□ -0.82
PDLIM7-205ENST00000393551 SMIM29Q86T20 159 aa9.95□□□□□ -0.82
PDLIM7-205ENST00000393551 DEFB105AQ8NG35 78 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms