RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 J3QL48 77 aa5.51□□□□□ -1.53
TDP1-203ENST00000393454 M0QXV9 152 aa5.51□□□□□ -1.53
TDP1-203ENST00000393454 LINC00575Q6W349 94 aa5.51□□□□□ -1.53
TDP1-203ENST00000393454 TEN1Q86WV5 123 aa5.51□□□□□ -1.53
TDP1-203ENST00000393454 IGLV1-50A0A075B6I6 118 aa5.5□□□□□ -1.53
TDP1-203ENST00000393454 hADV29S1A0JD25 119 aa5.5□□□□□ -1.53
TDP1-203ENST00000393454 TNP2Q05952 138 aa5.5□□□□□ -1.53
TDP1-203ENST00000393454 KCNQ1DNQ9H478 68 aa5.5□□□□□ -1.53
TDP1-203ENST00000393454 LINC00474Q9P2X8 69 aa5.5□□□□□ -1.53
TDP1-203ENST00000393454 IGLV5-52A0A0A0MRZ9 124 aa5.49□□□□□ -1.53
TDP1-203ENST00000393454 A0A1B0GX51 115 aa5.49□□□□□ -1.53
TDP1-203ENST00000393454 TRBV7-6A0A0J9YX20 115 aa5.49□□□□□ -1.53
TDP1-203ENST00000393454 K7ERU9 68 aa5.49□□□□□ -1.53
TDP1-203ENST00000393454 PRYO14603 147 aa5.49□□□□□ -1.53
TDP1-203ENST00000393454 ELOF1P60002 83 aaKnown RBP5.49□□□□□ -1.53
TDP1-203ENST00000393454 ORMDL1Q9P0S3 153 aa5.49□□□□□ -1.53
TDP1-203ENST00000393454 PPDPFLQ8WWR9 84 aa5.48□□□□□ -1.53
TDP1-203ENST00000393454 DNAH17Q9UFH2 4485 aa5.48□□□□□ -1.53
TDP1-203ENST00000393454 TEX49A0A1B0GTD5 131 aa5.47□□□□□ -1.53
TDP1-203ENST00000393454 ETDCA0A1B0GVM5 59 aa5.47□□□□□ -1.53
TDP1-203ENST00000393454 LINC01600Q96MT4 127 aa5.47□□□□□ -1.53
TDP1-203ENST00000393454 PANO1I0J062 215 aa5.47□□□□□ -1.53
TDP1-203ENST00000393454 J3QR89 54 aa5.47□□□□□ -1.53
TDP1-203ENST00000393454 UBE2BP63146 152 aa5.47□□□□□ -1.53
TDP1-203ENST00000393454 PHF5AQ7RTV0 110 aaKnown RBP5.47□□□□□ -1.53
TDP1-203ENST00000393454 REG3GQ6UW15 175 aa5.46□□□□□ -1.53
TDP1-203ENST00000393454 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.46□□□□□ -1.53
TDP1-203ENST00000393454 LINC00528Q8N1L1 170 aa5.46□□□□□ -1.54
TDP1-203ENST00000393454 Q6ZQY7 126 aa5.45□□□□□ -1.54
TDP1-203ENST00000393454 SPACA4Q8TDM5 124 aa5.45□□□□□ -1.54
TDP1-203ENST00000393454 HECTD4Q9Y4D8 3996 aa5.45□□□□□ -1.54
TDP1-203ENST00000393454 A0A1B0GV72 72 aa5.44□□□□□ -1.54
TDP1-203ENST00000393454 B5MCH6 92 aa5.44□□□□□ -1.54
TDP1-203ENST00000393454 TMEM256-PLSCR3K7ERE1 68 aa5.44□□□□□ -1.54
TDP1-203ENST00000393454 LCE6AA0A183 80 aa5.44□□□□□ -1.54
TDP1-203ENST00000393454 SPRR1AP35321 89 aa5.44□□□□□ -1.54
TDP1-203ENST00000393454 KRTAP4-16G5E9R7 235 aaPredicted RBP5.43□□□□□ -1.54
TDP1-203ENST00000393454 INAFM2P0DMQ5 153 aa5.43□□□□□ -1.54
TDP1-203ENST00000393454 KRTAP10-2P60368 255 aa5.43□□□□□ -1.54
TDP1-203ENST00000393454 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.43□□□□□ -1.54
TDP1-203ENST00000393454 Q6ZRX8 168 aa5.43□□□□□ -1.54
TDP1-203ENST00000393454 C21orf62-AS1Q17RA5 79 aa5.43□□□□□ -1.54
TDP1-203ENST00000393454 FAM19A1Q7Z5A9 133 aa5.43□□□□□ -1.54
TDP1-203ENST00000393454 DHRS4-AS1Q9P1J3 65 aa5.43□□□□□ -1.54
TDP1-203ENST00000393454 FRAS1Q86XX4 4008 aa5.42□□□□□ -1.54
TDP1-203ENST00000393454 HYDINQ4G0P3 5121 aa5.41□□□□□ -1.54
TDP1-203ENST00000393454 GHRHP01286 108 aa5.41□□□□□ -1.54
TDP1-203ENST00000393454 KRTAP11-1Q8IUC1 163 aa5.41□□□□□ -1.54
TDP1-203ENST00000393454 Q9BRP9 147 aa5.41□□□□□ -1.54
TDP1-203ENST00000393454 LAMTOR3Q9UHA4 124 aa5.41□□□□□ -1.54
TDP1-203ENST00000393454 SACSQ9NZJ4 4579 aa5.41□□□□□ -1.54
TDP1-203ENST00000393454 H3BQ85 93 aa5.41□□□□□ -1.54
TDP1-203ENST00000393454 DEFB105AQ8NG35 78 aa5.41□□□□□ -1.54
TDP1-203ENST00000393454 VPS25Q9BRG1 176 aa5.41□□□□□ -1.54
TDP1-203ENST00000393454 PRLHP81277 87 aa5.4□□□□□ -1.54
TDP1-203ENST00000393454 C14orf132Q9NPU4 83 aa5.4□□□□□ -1.54
TDP1-203ENST00000393454 DNAH11Q96DT5 4516 aa5.4□□□□□ -1.55
TDP1-203ENST00000393454 JMJD7-PLA2G4BH0Y9G9 81 aa5.39□□□□□ -1.55
TDP1-203ENST00000393454 UBE2AP49459 152 aa5.39□□□□□ -1.55
TDP1-203ENST00000393454 HIGD2AQ9BW72 106 aa5.39□□□□□ -1.55
TDP1-203ENST00000393454 PLAC8Q9NZF1 115 aa5.39□□□□□ -1.55
TDP1-203ENST00000393454 EPM2AB3EWF7 344 aa5.38□□□□□ -1.55
TDP1-203ENST00000393454 ERC2-IT1O76042 136 aa5.38□□□□□ -1.55
TDP1-203ENST00000393454 GAGE2AQ6NT46 116 aa5.38□□□□□ -1.55
TDP1-203ENST00000393454 ST20-AS1Q8NBB2 130 aa5.38□□□□□ -1.55
TDP1-203ENST00000393454 SMCR5Q8TEV8 140 aa5.38□□□□□ -1.55
TDP1-203ENST00000393454 OBSCN-AS1Q96MR7 158 aa5.38□□□□□ -1.55
TDP1-203ENST00000393454 FAT2Q9NYQ8 4349 aa5.37□□□□□ -1.55
TDP1-203ENST00000393454 RBM3P98179 157 aaKnown RBP5.37□□□□□ -1.55
TDP1-203ENST00000393454 FAM30AQ9NZY2 134 aa5.37□□□□□ -1.55
TDP1-203ENST00000393454 DNAH5Q8TE73 4624 aa5.37□□□□□ -1.55
TDP1-203ENST00000393454 LOC100996750A0A140TA64 210 aa5.36□□□□□ -1.55
TDP1-203ENST00000393454 BCE1O60756 84 aa5.36□□□□□ -1.55
TDP1-203ENST00000393454 NDUFV3P56181 108 aaKnown RBP5.36□□□□□ -1.55
TDP1-203ENST00000393454 KRTAP10-1P60331 282 aa5.36□□□□□ -1.55
TDP1-203ENST00000393454 KRTAP4-6Q9BYQ5 205 aa5.36□□□□□ -1.55
TDP1-203ENST00000393454 PKD1P98161 4303 aa5.36□□□□□ -1.55
TDP1-203ENST00000393454 LINC00336Q6ZUF6 198 aa5.36□□□□□ -1.55
TDP1-203ENST00000393454 Q8N377 158 aa5.36□□□□□ -1.55
TDP1-203ENST00000393454 LINC01547P58512 204 aaPredicted RBP5.35□□□□□ -1.55
TDP1-203ENST00000393454 CIRBP-AS1Q8TBR5 109 aa5.35□□□□□ -1.55
TDP1-203ENST00000393454 DSCR8Q96T75 97 aa5.35□□□□□ -1.55
TDP1-203ENST00000393454 PSORS1C2Q9UIG4 136 aa5.35□□□□□ -1.55
TDP1-203ENST00000393454 H0Y9J4 135 aa5.34□□□□□ -1.55
TDP1-203ENST00000393454 C1orf137Q5JT78 98 aa5.34□□□□□ -1.55
TDP1-203ENST00000393454 DNAH8Q96JB1 4490 aa5.34□□□□□ -1.55
TDP1-203ENST00000393454 IGLV5-48A0A075B6I7 105 aa5.33□□□□□ -1.56
TDP1-203ENST00000393454 HAMPP81172 84 aa5.33□□□□□ -1.56
TDP1-203ENST00000393454 C3orf22Q8N5N4 141 aa5.33□□□□□ -1.56
TDP1-203ENST00000393454 CDIP1Q9H305 208 aa5.33□□□□□ -1.56
TDP1-203ENST00000393454 FAM240AA0A1B0GVK7 77 aa5.33□□□□□ -1.56
TDP1-203ENST00000393454 CCKP06307 115 aa5.33□□□□□ -1.56
TDP1-203ENST00000393454 ACYP1P07311 99 aa5.33□□□□□ -1.56
TDP1-203ENST00000393454 SCXQ7RTU7 201 aa5.33□□□□□ -1.56
TDP1-203ENST00000393454 LOC110117498A0A087WWA1 95 aa5.31□□□□□ -1.56
TDP1-203ENST00000393454 Q6ZQT0 140 aa5.31□□□□□ -1.56
TDP1-203ENST00000393454 Q6ZSA8 131 aa5.31□□□□□ -1.56
TDP1-203ENST00000393454 KRTAP13-1Q8IUC0 172 aa5.31□□□□□ -1.56
TDP1-203ENST00000393454 SRRM2Q9UQ35 2752 aaKnown RBP5.3□□□□□ -1.56
TDP1-203ENST00000393454 F8WEM9 126 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 166.2 ms