RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 UNQ6190/PRO20217Q6UXQ8 127 aa2.28□□□□□ -2.04
TRAV39-201ENST00000390466 Q6ZRP5 223 aa2.28□□□□□ -2.04
TRAV39-201ENST00000390466 Q6ZRU5 148 aa2.28□□□□□ -2.04
TRAV39-201ENST00000390466 Q8N9L7 120 aa2.28□□□□□ -2.04
TRAV39-201ENST00000390466 PKIGQ9Y2B9 76 aa2.28□□□□□ -2.04
TRAV39-201ENST00000390466 X6R8D5 127 aa2.28□□□□□ -2.04
TRAV39-201ENST00000390466 MXRA5Q9NR99 2828 aa2.27□□□□□ -2.05
TRAV39-201ENST00000390466 GYPEP15421 78 aa2.27□□□□□ -2.05
TRAV39-201ENST00000390466 DSCR9P59020 149 aa2.27□□□□□ -2.05
TRAV39-201ENST00000390466 HAMPP81172 84 aa2.27□□□□□ -2.05
TRAV39-201ENST00000390466 Q1T7F1 81 aa2.27□□□□□ -2.05
TRAV39-201ENST00000390466 C1orf195Q5TG92 126 aa2.27□□□□□ -2.05
TRAV39-201ENST00000390466 PRR15Q8IV56 129 aa2.27□□□□□ -2.05
TRAV39-201ENST00000390466 LINC00269Q8N2A0 174 aa2.27□□□□□ -2.05
TRAV39-201ENST00000390466 MDFIQ99750 246 aa2.27□□□□□ -2.05
TRAV39-201ENST00000390466 PRR34Q9NV39 138 aa2.27□□□□□ -2.05
TRAV39-201ENST00000390466 C6orf48Q9UBA6 75 aa2.27□□□□□ -2.05
TRAV39-201ENST00000390466 FLNAP21333 2647 aaKnown RBP2.26□□□□□ -2.05
TRAV39-201ENST00000390466 MTORP42345 2549 aa2.26□□□□□ -2.05
TRAV39-201ENST00000390466 IGLV5-48A0A075B6I7 105 aa2.26□□□□□ -2.05
TRAV39-201ENST00000390466 FAM229AH3BQW9 127 aa2.26□□□□□ -2.05
TRAV39-201ENST00000390466 FUSP35637 526 aaKnown RBP eCLIP2.26□□□□□ -2.05
TRAV39-201ENST00000390466 SPAG11BQ08648 103 aa2.26□□□□□ -2.05
TRAV39-201ENST00000390466 BRK1Q8WUW1 75 aa2.26□□□□□ -2.05
TRAV39-201ENST00000390466 DIRC1Q969H9 104 aa2.26□□□□□ -2.05
TRAV39-201ENST00000390466 SMR3AQ99954 134 aa2.26□□□□□ -2.05
TRAV39-201ENST00000390466 CYP4F30PQ9H0H9 118 aa2.26□□□□□ -2.05
TRAV39-201ENST00000390466 LAMTOR3Q9UHA4 124 aa2.26□□□□□ -2.05
TRAV39-201ENST00000390466 A0A1W2PNM2 257 aa2.25□□□□□ -2.05
TRAV39-201ENST00000390466 KRTAP4-16G5E9R7 235 aaPredicted RBP2.25□□□□□ -2.05
TRAV39-201ENST00000390466 ZNF73O43830 326 aaPredicted RBP2.25□□□□□ -2.05
TRAV39-201ENST00000390466 DSCR10P59022 87 aa2.25□□□□□ -2.05
TRAV39-201ENST00000390466 SEC61GP60059 68 aa2.25□□□□□ -2.05
TRAV39-201ENST00000390466 REG3AQ06141 175 aa2.25□□□□□ -2.05
TRAV39-201ENST00000390466 SMIM29Q86T20 159 aa2.25□□□□□ -2.05
TRAV39-201ENST00000390466 Q8N377 158 aa2.25□□□□□ -2.05
TRAV39-201ENST00000390466 MAPK1IP1LQ8NDC0 245 aa2.25□□□□□ -2.05
TRAV39-201ENST00000390466 HIGD2AQ9BW72 106 aa2.25□□□□□ -2.05
TRAV39-201ENST00000390466 PRO0255Q9UI72 69 aa2.25□□□□□ -2.05
TRAV39-201ENST00000390466 ALMS1Q8TCU4 4167 aa2.24□□□□□ -2.05
TRAV39-201ENST00000390466 FBN3Q75N90 2809 aa2.24□□□□□ -2.05
TRAV39-201ENST00000390466 IGLV10-54A0A075B6I4 117 aa2.24□□□□□ -2.05
TRAV39-201ENST00000390466 DNAJC9-AS1A6NH13 148 aa2.24□□□□□ -2.05
TRAV39-201ENST00000390466 A8MU10 97 aa2.24□□□□□ -2.05
TRAV39-201ENST00000390466 RNASE1P07998 156 aaKnown RBP2.24□□□□□ -2.05
TRAV39-201ENST00000390466 CMC4P56277 68 aaPredicted RBP2.24□□□□□ -2.05
TRAV39-201ENST00000390466 C15orf56Q8N910 161 aa2.24□□□□□ -2.05
TRAV39-201ENST00000390466 C1orf64Q8NEQ6 169 aa2.24□□□□□ -2.05
TRAV39-201ENST00000390466 XAGE1AQ9HD64 81 aa2.24□□□□□ -2.05
TRAV39-201ENST00000390466 KLK12Q9UKR0 248 aa2.24□□□□□ -2.05
TRAV39-201ENST00000390466 V9GYY9 64 aa2.24□□□□□ -2.05
TRAV39-201ENST00000390466 CUBNO60494 3623 aa2.24□□□□□ -2.05
TRAV39-201ENST00000390466 NSD1Q96L73 2696 aaPredicted RBP2.23□□□□□ -2.05
TRAV39-201ENST00000390466 TRAV22A0A0B4J277 110 aa2.23□□□□□ -2.05
TRAV39-201ENST00000390466 A0A1B0GW54 56 aa2.23□□□□□ -2.05
TRAV39-201ENST00000390466 M0R378 163 aa2.23□□□□□ -2.05
TRAV39-201ENST00000390466 PSCAO43653 123 aa2.23□□□□□ -2.05
TRAV39-201ENST00000390466 SPRR1AP35321 89 aa2.23□□□□□ -2.05
TRAV39-201ENST00000390466 KHDC1LQ5JSQ8 128 aa2.23□□□□□ -2.05
TRAV39-201ENST00000390466 Q5VV11 94 aa2.23□□□□□ -2.05
TRAV39-201ENST00000390466 KRTAP7-1Q8IUC3 87 aa2.23□□□□□ -2.05
TRAV39-201ENST00000390466 ST20-AS1Q8NBB2 130 aa2.23□□□□□ -2.05
TRAV39-201ENST00000390466 Q8NBF4 154 aa2.23□□□□□ -2.05
TRAV39-201ENST00000390466 MPLKIPQ8TAP9 179 aa2.23□□□□□ -2.05
TRAV39-201ENST00000390466 SPRR4Q96PI1 79 aa2.23□□□□□ -2.05
TRAV39-201ENST00000390466 IGLV5-37A0A075B6J1 123 aa2.22□□□□□ -2.05
TRAV39-201ENST00000390466 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.22□□□□□ -2.05
TRAV39-201ENST00000390466 A0A096LPF7 62 aa2.22□□□□□ -2.05
TRAV39-201ENST00000390466 LYRM9A8MSI8 78 aa2.22□□□□□ -2.05
TRAV39-201ENST00000390466 KRTAP29-1A8MX34 341 aaPredicted RBP2.22□□□□□ -2.05
TRAV39-201ENST00000390466 ANGP03950 147 aaKnown RBP2.22□□□□□ -2.05
TRAV39-201ENST00000390466 DEFB130BP0DP73 79 aa2.22□□□□□ -2.05
TRAV39-201ENST00000390466 DEFB130AP0DP74 79 aa2.22□□□□□ -2.05
TRAV39-201ENST00000390466 EGFEM1PQ0D2K5 195 aa2.22□□□□□ -2.05
TRAV39-201ENST00000390466 KPRPQ5T749 579 aaPredicted RBP2.22□□□□□ -2.05
TRAV39-201ENST00000390466 LELP1Q5T871 98 aa2.22□□□□□ -2.05
TRAV39-201ENST00000390466 Q8NAQ8 132 aa2.22□□□□□ -2.05
TRAV39-201ENST00000390466 Q9BRP9 147 aa2.22□□□□□ -2.05
TRAV39-201ENST00000390466 KCNQ1DNQ9H478 68 aa2.22□□□□□ -2.05
TRAV39-201ENST00000390466 PLAC8Q9NZF1 115 aa2.22□□□□□ -2.05
TRAV39-201ENST00000390466 FBN1P35555 2871 aaKnown RBP2.21□□□□□ -2.06
TRAV39-201ENST00000390466 ETDCA0A1B0GVM5 59 aa2.21□□□□□ -2.06
TRAV39-201ENST00000390466 COL6A5A8TX70 2615 aa2.21□□□□□ -2.06
TRAV39-201ENST00000390466 C3orf84H3BNL1 204 aa2.21□□□□□ -2.06
TRAV39-201ENST00000390466 KRTAP10-3P60369 221 aa2.21□□□□□ -2.06
TRAV39-201ENST00000390466 PMAIP1Q13794 54 aa2.21□□□□□ -2.06
TRAV39-201ENST00000390466 SERTAD4-AS1Q5TG53 156 aa2.21□□□□□ -2.06
TRAV39-201ENST00000390466 FAM30AQ9NZY2 134 aa2.21□□□□□ -2.06
TRAV39-201ENST00000390466 PLA2G2DQ9UNK4 145 aa2.21□□□□□ -2.06
TRAV39-201ENST00000390466 LINC00588Q9Y4M8 146 aa2.21□□□□□ -2.06
TRAV39-201ENST00000390466 A8MUN3 132 aa2.2□□□□□ -2.06
TRAV39-201ENST00000390466 INAFM1C9JVW0 142 aa2.2□□□□□ -2.06
TRAV39-201ENST00000390466 K7EQZ3 153 aa2.2□□□□□ -2.06
TRAV39-201ENST00000390466 DAD1P61803 113 aa2.2□□□□□ -2.06
TRAV39-201ENST00000390466 SYCNQ0VAF6 134 aa2.2□□□□□ -2.06
TRAV39-201ENST00000390466 Q6ZRX8 168 aa2.2□□□□□ -2.06
TRAV39-201ENST00000390466 C9orf163Q8N9P6 203 aa2.2□□□□□ -2.06
TRAV39-201ENST00000390466 SPANXA2-OT1Q8N9U9 137 aa2.2□□□□□ -2.06
TRAV39-201ENST00000390466 C7orf33Q8WU49 177 aa2.2□□□□□ -2.06
TRAV39-201ENST00000390466 DNAH3Q8TD57 4116 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms