RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 FRAS1Q86XX4 4008 aa7.9□□□□□ -1.14
SPTBN1-203ENST00000389980 DNAH17Q9UFH2 4485 aa7.9□□□□□ -1.15
SPTBN1-203ENST00000389980 NDUFC2O95298 119 aa7.9□□□□□ -1.15
SPTBN1-203ENST00000389980 C9orf129Q5T035 196 aaKnown RBP7.9□□□□□ -1.15
SPTBN1-203ENST00000389980 LOC107984640A0A0U1RRK4 108 aa7.89□□□□□ -1.15
SPTBN1-203ENST00000389980 BAALC-AS2P0C853 105 aa7.88□□□□□ -1.15
SPTBN1-203ENST00000389980 RPL28P46779 137 aaKnown RBP7.88□□□□□ -1.15
SPTBN1-203ENST00000389980 SACSQ9NZJ4 4579 aa7.88□□□□□ -1.15
SPTBN1-203ENST00000389980 SERP2Q8N6R1 65 aa7.88□□□□□ -1.15
SPTBN1-203ENST00000389980 DPH3Q96FX2 82 aa7.87□□□□□ -1.15
SPTBN1-203ENST00000389980 TLX1NBP0CAT3 122 aa7.87□□□□□ -1.15
SPTBN1-203ENST00000389980 CNBPP62633 177 aaKnown RBP7.87□□□□□ -1.15
SPTBN1-203ENST00000389980 C14orf177Q52M58 125 aa7.87□□□□□ -1.15
SPTBN1-203ENST00000389980 Q6JHZ5 121 aa7.87□□□□□ -1.15
SPTBN1-203ENST00000389980 VPREB1P12018 145 aa7.86□□□□□ -1.15
SPTBN1-203ENST00000389980 FUSP35637 526 aaKnown RBP eCLIP7.86□□□□□ -1.15
SPTBN1-203ENST00000389980 A0A087WYN8 130 aa7.86□□□□□ -1.15
SPTBN1-203ENST00000389980 FAM168BA1KXE4 195 aa7.86□□□□□ -1.15
SPTBN1-203ENST00000389980 S100A7L2Q5SY68 101 aa7.85□□□□□ -1.15
SPTBN1-203ENST00000389980 C1orf134Q5TEV5 83 aa7.85□□□□□ -1.15
SPTBN1-203ENST00000389980 SERTAD4-AS1Q5TG53 156 aa7.85□□□□□ -1.15
SPTBN1-203ENST00000389980 A0A087WTM6 91 aa7.84□□□□□ -1.15
SPTBN1-203ENST00000389980 Q8N814 137 aa7.84□□□□□ -1.15
SPTBN1-203ENST00000389980 A0A096LNI7 61 aa7.83□□□□□ -1.16
SPTBN1-203ENST00000389980 IGKV2-24A0A0C4DH68 120 aa7.83□□□□□ -1.16
SPTBN1-203ENST00000389980 TRBV10-3A0A0K0K1G6 114 aa7.83□□□□□ -1.16
SPTBN1-203ENST00000389980 hADV29S1A0JD25 119 aa7.83□□□□□ -1.16
SPTBN1-203ENST00000389980 DNAH11Q96DT5 4516 aa7.82□□□□□ -1.16
SPTBN1-203ENST00000389980 KRTAP7-1Q8IUC3 87 aa7.82□□□□□ -1.16
SPTBN1-203ENST00000389980 IGLV6-57P01721 117 aa7.81□□□□□ -1.16
SPTBN1-203ENST00000389980 OBSCN-AS1Q96MR7 158 aa7.81□□□□□ -1.16
SPTBN1-203ENST00000389980 C22orf24Q9Y442 160 aa7.81□□□□□ -1.16
SPTBN1-203ENST00000389980 H0YGX0 51 aa7.81□□□□□ -1.16
SPTBN1-203ENST00000389980 DNAL4O96015 105 aa7.81□□□□□ -1.16
SPTBN1-203ENST00000389980 FAT2Q9NYQ8 4349 aa7.8□□□□□ -1.16
SPTBN1-203ENST00000389980 M0R378 163 aa7.8□□□□□ -1.16
SPTBN1-203ENST00000389980 CHTF8P0CG12 524 aa7.8□□□□□ -1.16
SPTBN1-203ENST00000389980 C9orf163Q8N9P6 203 aa7.8□□□□□ -1.16
SPTBN1-203ENST00000389980 ATP5EP2Q5VTU8 51 aa7.8□□□□□ -1.16
SPTBN1-203ENST00000389980 NKAPP1Q8N9T2 125 aa7.8□□□□□ -1.16
SPTBN1-203ENST00000389980 BCE1O60756 84 aa7.79□□□□□ -1.16
SPTBN1-203ENST00000389980 TNP2Q05952 138 aa7.79□□□□□ -1.16
SPTBN1-203ENST00000389980 C6orf99Q4VX62 202 aa7.79□□□□□ -1.16
SPTBN1-203ENST00000389980 C16orf90A8MZG2 172 aa7.78□□□□□ -1.16
SPTBN1-203ENST00000389980 C7orf33Q8WU49 177 aa7.78□□□□□ -1.16
SPTBN1-203ENST00000389980 DNAH5Q8TE73 4624 aa7.78□□□□□ -1.16
SPTBN1-203ENST00000389980 RTL8CO15255 209 aa7.77□□□□□ -1.17
SPTBN1-203ENST00000389980 PLA2G2DQ9UNK4 145 aa7.77□□□□□ -1.17
SPTBN1-203ENST00000389980 TRAV23DV6A0A075B6W5 121 aa7.77□□□□□ -1.17
SPTBN1-203ENST00000389980 RPL37AP8A6NKH3 93 aa7.77□□□□□ -1.17
SPTBN1-203ENST00000389980 A0A1W2PNN7 141 aa7.76□□□□□ -1.17
SPTBN1-203ENST00000389980 PANO1I0J062 215 aa7.76□□□□□ -1.17
SPTBN1-203ENST00000389980 PKD1P98161 4303 aa7.76□□□□□ -1.17
SPTBN1-203ENST00000389980 LINC00167Q96N53 147 aa7.75□□□□□ -1.17
SPTBN1-203ENST00000389980 KMT2CQ8NEZ4 4911 aaKnown RBP7.75□□□□□ -1.17
SPTBN1-203ENST00000389980 IGLV5-37A0A075B6J1 123 aa7.74□□□□□ -1.17
SPTBN1-203ENST00000389980 ZNF73O43830 326 aaPredicted RBP7.74□□□□□ -1.17
SPTBN1-203ENST00000389980 Q5XG85 94 aa7.74□□□□□ -1.17
SPTBN1-203ENST00000389980 MRPL55Q7Z7F7 128 aaKnown RBP7.73□□□□□ -1.17
SPTBN1-203ENST00000389980 EPM2AB3EWF7 344 aa7.73□□□□□ -1.17
SPTBN1-203ENST00000389980 DIRC1Q969H9 104 aa7.73□□□□□ -1.17
SPTBN1-203ENST00000389980 DNAH8Q96JB1 4490 aa7.72□□□□□ -1.17
SPTBN1-203ENST00000389980 IGLV5-52A0A0A0MRZ9 124 aa7.72□□□□□ -1.17
SPTBN1-203ENST00000389980 LINC00846Q9NV44 126 aa7.72□□□□□ -1.17
SPTBN1-203ENST00000389980 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.72□□□□□ -1.17
SPTBN1-203ENST00000389980 IGLV1-50A0A075B6I6 118 aa7.71□□□□□ -1.17
SPTBN1-203ENST00000389980 JMJD7-PLA2G4BH0Y9G9 81 aa7.71□□□□□ -1.18
SPTBN1-203ENST00000389980 CCKP06307 115 aa7.71□□□□□ -1.18
SPTBN1-203ENST00000389980 KRTAP10-2P60368 255 aa7.71□□□□□ -1.18
SPTBN1-203ENST00000389980 CYSTM1Q9H1C7 97 aa7.71□□□□□ -1.18
SPTBN1-203ENST00000389980 KCNQ1DNQ9H478 68 aa7.71□□□□□ -1.18
SPTBN1-203ENST00000389980 RYR2Q92736 4967 aa7.71□□□□□ -1.18
SPTBN1-203ENST00000389980 LCE6AA0A183 80 aa7.7□□□□□ -1.18
SPTBN1-203ENST00000389980 DSCR8Q96T75 97 aa7.7□□□□□ -1.18
SPTBN1-203ENST00000389980 ORMDL1Q9P0S3 153 aa7.7□□□□□ -1.18
SPTBN1-203ENST00000389980 SERP1Q9Y6X1 66 aa7.7□□□□□ -1.18
SPTBN1-203ENST00000389980 IGKV3D-7A0A0C4DH55 119 aa7.7□□□□□ -1.18
SPTBN1-203ENST00000389980 C4orf26Q17RF5 130 aa7.7□□□□□ -1.18
SPTBN1-203ENST00000389980 LINC00575Q6W349 94 aa7.7□□□□□ -1.18
SPTBN1-203ENST00000389980 PHF5AQ7RTV0 110 aaKnown RBP7.7□□□□□ -1.18
SPTBN1-203ENST00000389980 C14orf132Q9NPU4 83 aa7.7□□□□□ -1.18
SPTBN1-203ENST00000389980 OXTP01178 125 aa7.69□□□□□ -1.18
SPTBN1-203ENST00000389980 PRO0628Q9UI54 55 aa7.69□□□□□ -1.18
SPTBN1-203ENST00000389980 COX7BP24311 80 aa7.69□□□□□ -1.18
SPTBN1-203ENST00000389980 ELOF1P60002 83 aaKnown RBP7.68□□□□□ -1.18
SPTBN1-203ENST00000389980 KRTAP11-1Q8IUC1 163 aa7.68□□□□□ -1.18
SPTBN1-203ENST00000389980 SPACA4Q8TDM5 124 aa7.68□□□□□ -1.18
SPTBN1-203ENST00000389980 PKIGQ9Y2B9 76 aa7.68□□□□□ -1.18
SPTBN1-203ENST00000389980 HRCT1Q6UXD1 115 aa7.67□□□□□ -1.18
SPTBN1-203ENST00000389980 LINC00474Q9P2X8 69 aa7.67□□□□□ -1.18
SPTBN1-203ENST00000389980 PKHD1P08F94 4074 aa7.67□□□□□ -1.18
SPTBN1-203ENST00000389980 FAM236DA0A1B0GTK5 79 aa7.67□□□□□ -1.18
SPTBN1-203ENST00000389980 FAM236CP0DP71 79 aa7.67□□□□□ -1.18
SPTBN1-203ENST00000389980 PRYO14603 147 aa7.66□□□□□ -1.18
SPTBN1-203ENST00000389980 GHRHP01286 108 aa7.66□□□□□ -1.18
SPTBN1-203ENST00000389980 SRRM2Q9UQ35 2752 aaKnown RBP7.66□□□□□ -1.18
SPTBN1-203ENST00000389980 LINC00528Q8N1L1 170 aa7.66□□□□□ -1.18
SPTBN1-203ENST00000389980 TRBV7-6A0A0J9YX20 115 aa7.65□□□□□ -1.18
SPTBN1-203ENST00000389980 KRTAP4-16G5E9R7 235 aaPredicted RBP7.65□□□□□ -1.18
SPTBN1-203ENST00000389980 A0A087WVE0 104 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms