RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 SSBP3-AS1Q7Z2R9 100 aa9.83□□□□□ -0.84
LRRK1-201ENST00000388948 A8MWP4 228 aa9.82□□□□□ -0.84
LRRK1-201ENST00000388948 MRPL34Q9BQ48 92 aaKnown RBP9.82□□□□□ -0.84
LRRK1-201ENST00000388948 DNAH12Q6ZR08 3092 aa9.82□□□□□ -0.84
LRRK1-201ENST00000388948 IGLV6-57P01721 117 aa9.82□□□□□ -0.84
LRRK1-201ENST00000388948 UTRNP46939 3433 aa9.82□□□□□ -0.84
LRRK1-201ENST00000388948 C9orf163Q8N9P6 203 aa9.81□□□□□ -0.84
LRRK1-201ENST00000388948 RBM12B-AS1Q9P1G2 102 aa9.81□□□□□ -0.84
LRRK1-201ENST00000388948 LOC110117498A0A087WWA1 95 aa9.81□□□□□ -0.84
LRRK1-201ENST00000388948 ANAPC11Q9NYG5 84 aa9.8□□□□□ -0.84
LRRK1-201ENST00000388948 C15orf56Q8N910 161 aa9.8□□□□□ -0.84
LRRK1-201ENST00000388948 APLNQ9ULZ1 77 aa9.8□□□□□ -0.84
LRRK1-201ENST00000388948 IGLV5-37A0A075B6J1 123 aa9.8□□□□□ -0.84
LRRK1-201ENST00000388948 LOC101927531A0A1B0GV80 90 aa9.8□□□□□ -0.84
LRRK1-201ENST00000388948 H3BPC8 53 aa9.8□□□□□ -0.84
LRRK1-201ENST00000388948 IGLV7-43P04211 117 aa9.79□□□□□ -0.84
LRRK1-201ENST00000388948 KCNQ1DNQ9H478 68 aa9.78□□□□□ -0.84
LRRK1-201ENST00000388948 KLK9Q2XQG4 91 aa9.77□□□□□ -0.84
LRRK1-201ENST00000388948 STAB1Q9NY15 2570 aa9.77□□□□□ -0.85
LRRK1-201ENST00000388948 PRR34Q9NV39 138 aa9.76□□□□□ -0.85
LRRK1-201ENST00000388948 SETXQ7Z333 2677 aaKnown RBP9.76□□□□□ -0.85
LRRK1-201ENST00000388948 KRTAP1-3Q8IUG1 177 aa9.76□□□□□ -0.85
LRRK1-201ENST00000388948 PSORS1C2Q9UIG4 136 aa9.76□□□□□ -0.85
LRRK1-201ENST00000388948 GIG44P09565 113 aaPredicted RBP9.74□□□□□ -0.85
LRRK1-201ENST00000388948 K7EQZ3 153 aa9.74□□□□□ -0.85
LRRK1-201ENST00000388948 IGFL1Q6UW32 110 aa9.74□□□□□ -0.85
LRRK1-201ENST00000388948 ZNF575Q86XF7 245 aa9.73□□□□□ -0.85
LRRK1-201ENST00000388948 C9orf129Q5T035 196 aaKnown RBP9.73□□□□□ -0.85
LRRK1-201ENST00000388948 CASC10Q5T4H9 136 aa9.71□□□□□ -0.86
LRRK1-201ENST00000388948 KRTAP1-1Q07627 177 aa9.7□□□□□ -0.86
LRRK1-201ENST00000388948 FLG2Q5D862 2391 aaPredicted RBP9.7□□□□□ -0.86
LRRK1-201ENST00000388948 TNP2Q05952 138 aa9.7□□□□□ -0.86
LRRK1-201ENST00000388948 A0A1W2PNN7 141 aa9.69□□□□□ -0.86
LRRK1-201ENST00000388948 CENPEQ02224 2701 aa9.69□□□□□ -0.86
LRRK1-201ENST00000388948 M0R2T5 61 aa9.68□□□□□ -0.86
LRRK1-201ENST00000388948 C8orf17Q9NRJ1 99 aa9.68□□□□□ -0.86
LRRK1-201ENST00000388948 LINC01600Q96MT4 127 aa9.68□□□□□ -0.86
LRRK1-201ENST00000388948 LINC01554Q52M75 96 aa9.68□□□□□ -0.86
LRRK1-201ENST00000388948 A0A1B0GVX0 72 aa9.67□□□□□ -0.86
LRRK1-201ENST00000388948 A0A0G2JQZ4 141 aa9.66□□□□□ -0.86
LRRK1-201ENST00000388948 TLX1NBP0CAT3 122 aa9.66□□□□□ -0.86
LRRK1-201ENST00000388948 LINC00612Q8N6U2 182 aa9.64□□□□□ -0.87
LRRK1-201ENST00000388948 TEP1Q99973 2627 aaKnown RBP9.64□□□□□ -0.87
LRRK1-201ENST00000388948 AKAP13Q12802 2813 aa9.64□□□□□ -0.87
LRRK1-201ENST00000388948 Q6ZSA8 131 aa9.64□□□□□ -0.87
LRRK1-201ENST00000388948 SMCPP49901 116 aaPredicted RBP9.63□□□□□ -0.87
LRRK1-201ENST00000388948 CNBPP62633 177 aaKnown RBP9.63□□□□□ -0.87
LRRK1-201ENST00000388948 PRR15Q8IV56 129 aa9.63□□□□□ -0.87
LRRK1-201ENST00000388948 Q8N377 158 aa9.62□□□□□ -0.87
LRRK1-201ENST00000388948 LITAFQ99732 161 aa9.62□□□□□ -0.87
LRRK1-201ENST00000388948 PLA2G2DQ9UNK4 145 aa9.62□□□□□ -0.87
LRRK1-201ENST00000388948 SPRR4Q96PI1 79 aa9.62□□□□□ -0.87
LRRK1-201ENST00000388948 C5orf42Q9H799 3197 aa9.61□□□□□ -0.87
LRRK1-201ENST00000388948 SPINT4Q6UDR6 99 aa9.61□□□□□ -0.87
LRRK1-201ENST00000388948 CR1P17927 2039 aa9.6□□□□□ -0.87
LRRK1-201ENST00000388948 TEX15Q9BXT5 2789 aa9.59□□□□□ -0.87
LRRK1-201ENST00000388948 IGLV7-46A0A075B6I9 117 aa9.59□□□□□ -0.87
LRRK1-201ENST00000388948 COA5Q86WW8 74 aa9.56□□□□□ -0.88
LRRK1-201ENST00000388948 CRIPTQ9P021 101 aa9.54□□□□□ -0.88
LRRK1-201ENST00000388948 PRR26Q8N8Z3 221 aa9.53□□□□□ -0.88
LRRK1-201ENST00000388948 ERC2-IT1O76042 136 aa9.53□□□□□ -0.88
LRRK1-201ENST00000388948 UQCR11O14957 56 aa9.52□□□□□ -0.88
LRRK1-201ENST00000388948 PRO0461Q9UI25 63 aa9.51□□□□□ -0.89
LRRK1-201ENST00000388948 Q8N1X5 172 aa9.5□□□□□ -0.89
LRRK1-201ENST00000388948 EIF4EBP3O60516 100 aaPredicted RBP9.5□□□□□ -0.89
LRRK1-201ENST00000388948 IGLV5-48A0A075B6I7 105 aa9.49□□□□□ -0.89
LRRK1-201ENST00000388948 A0A0D9SG42 100 aa9.48□□□□□ -0.89
LRRK1-201ENST00000388948 BAHCC1Q9P281 2608 aa9.45□□□□□ -0.9
LRRK1-201ENST00000388948 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.45□□□□□ -0.9
LRRK1-201ENST00000388948 CHD6Q8TD26 2715 aa9.43□□□□□ -0.9
LRRK1-201ENST00000388948 MIR22HGQ0VDD5 57 aa9.42□□□□□ -0.9
LRRK1-201ENST00000388948 C4orf26Q17RF5 130 aa9.39□□□□□ -0.91
LRRK1-201ENST00000388948 COL6A5A8TX70 2615 aa9.39□□□□□ -0.91
LRRK1-201ENST00000388948 NBEAL1Q6ZS30 2694 aa9.37□□□□□ -0.91
LRRK1-201ENST00000388948 UNC79Q9P2D8 2635 aa9.37□□□□□ -0.91
LRRK1-201ENST00000388948 FAM104AQ969W3 186 aa9.37□□□□□ -0.91
LRRK1-201ENST00000388948 A8MUN3 132 aa9.37□□□□□ -0.91
LRRK1-201ENST00000388948 PRO0628Q9UI54 55 aa9.37□□□□□ -0.91
LRRK1-201ENST00000388948 CAMK2N1Q7Z7J9 78 aa9.37□□□□□ -0.91
LRRK1-201ENST00000388948 PCNTO95613 3336 aa9.36□□□□□ -0.91
LRRK1-201ENST00000388948 A0A1W2PNM2 257 aa9.35□□□□□ -0.91
LRRK1-201ENST00000388948 CD164Q04900 197 aa9.35□□□□□ -0.91
LRRK1-201ENST00000388948 Q5VSD8 79 aa9.34□□□□□ -0.91
LRRK1-201ENST00000388948 CYP4F30PQ9H0H9 118 aa9.32□□□□□ -0.92
LRRK1-201ENST00000388948 CHD7Q9P2D1 2997 aa9.32□□□□□ -0.92
LRRK1-201ENST00000388948 FAM229BQ4G0N7 80 aa9.31□□□□□ -0.92
LRRK1-201ENST00000388948 WIPF1O43516 503 aa9.31□□□□□ -0.92
LRRK1-201ENST00000388948 LCE6AA0A183 80 aa9.3□□□□□ -0.92
LRRK1-201ENST00000388948 RPS28P62857 69 aaKnown RBP9.3□□□□□ -0.92
LRRK1-201ENST00000388948 PLAC8Q9NZF1 115 aa9.28□□□□□ -0.92
LRRK1-201ENST00000388948 DMBT1Q9UGM3 2413 aaPredicted RBP9.28□□□□□ -0.92
LRRK1-201ENST00000388948 CDC42SE1Q9NRR8 79 aa9.27□□□□□ -0.93
LRRK1-201ENST00000388948 MGAQ8IWI9 3026 aa9.27□□□□□ -0.93
LRRK1-201ENST00000388948 SEC61BP60468 96 aaKnown RBP9.26□□□□□ -0.93
LRRK1-201ENST00000388948 NOTCH1P46531 2555 aa9.26□□□□□ -0.93
LRRK1-201ENST00000388948 CFAP54Q96N23 3096 aa9.25□□□□□ -0.93
LRRK1-201ENST00000388948 RANBP2P49792 3224 aaKnown RBP9.23□□□□□ -0.93
LRRK1-201ENST00000388948 CSAG1Q6PB30 78 aa9.2□□□□□ -0.94
LRRK1-201ENST00000388948 KLKP1Q107X0 134 aa9.19□□□□□ -0.94
LRRK1-201ENST00000388948 ZNF292O60281 2723 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 199 ms