RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 NBEAL1Q6ZS30 2694 aa9.27□□□□□ -0.93
SDC1-202ENST00000381150 V9GYY9 64 aa9.27□□□□□ -0.93
SDC1-202ENST00000381150 IGLV6-57P01721 117 aa9.26□□□□□ -0.93
SDC1-202ENST00000381150 NOTCH1P46531 2555 aa9.26□□□□□ -0.93
SDC1-202ENST00000381150 FLNBO75369 2602 aaKnown RBP9.26□□□□□ -0.93
SDC1-202ENST00000381150 PSPHP1O15172 72 aa9.26□□□□□ -0.93
SDC1-202ENST00000381150 LYRM9A8MSI8 78 aa9.25□□□□□ -0.93
SDC1-202ENST00000381150 C6orf48Q9UBA6 75 aa9.25□□□□□ -0.93
SDC1-202ENST00000381150 ESRGQ1W209 222 aa9.24□□□□□ -0.93
SDC1-202ENST00000381150 SMIM29Q86T20 159 aa9.23□□□□□ -0.93
SDC1-202ENST00000381150 BCE1O60756 84 aa9.23□□□□□ -0.93
SDC1-202ENST00000381150 Q8NAQ8 132 aa9.22□□□□□ -0.93
SDC1-202ENST00000381150 MAST4O15021 2626 aa9.22□□□□□ -0.93
SDC1-202ENST00000381150 EPM2AB3EWF7 344 aa9.21□□□□□ -0.93
SDC1-202ENST00000381150 APOC4P55056 127 aa9.21□□□□□ -0.94
SDC1-202ENST00000381150 IGKV4-1P06312 121 aa9.2□□□□□ -0.94
SDC1-202ENST00000381150 COL6A5A8TX70 2615 aa9.19□□□□□ -0.94
SDC1-202ENST00000381150 ATP5EP56381 51 aaPredicted RBP9.19□□□□□ -0.94
SDC1-202ENST00000381150 DEFB116Q30KQ4 102 aa9.19□□□□□ -0.94
SDC1-202ENST00000381150 ELOF1P60002 83 aaKnown RBP9.18□□□□□ -0.94
SDC1-202ENST00000381150 RPL37AP8A6NKH3 93 aa9.18□□□□□ -0.94
SDC1-202ENST00000381150 SEC61GP60059 68 aa9.18□□□□□ -0.94
SDC1-202ENST00000381150 FBN1P35555 2871 aaKnown RBP9.18□□□□□ -0.94
SDC1-202ENST00000381150 A0A0J9YWU9 116 aa9.16□□□□□ -0.94
SDC1-202ENST00000381150 IGHV4-30-4P0DP06 118 aa9.16□□□□□ -0.94
SDC1-202ENST00000381150 Q6ZRU5 148 aa9.16□□□□□ -0.94
SDC1-202ENST00000381150 NKAPP1Q8N9T2 125 aa9.16□□□□□ -0.94
SDC1-202ENST00000381150 OCR1Q9BZK8 76 aa9.16□□□□□ -0.94
SDC1-202ENST00000381150 CSMD3Q7Z407 3707 aa9.15□□□□□ -0.94
SDC1-202ENST00000381150 IGKV2D-24A0A075B6R9 120 aa9.14□□□□□ -0.95
SDC1-202ENST00000381150 A0A0G2JQZ4 141 aa9.14□□□□□ -0.95
SDC1-202ENST00000381150 A0A1W2PNN7 141 aa9.14□□□□□ -0.95
SDC1-202ENST00000381150 M0R378 163 aa9.13□□□□□ -0.95
SDC1-202ENST00000381150 ANK2Q01484 3957 aa9.13□□□□□ -0.95
SDC1-202ENST00000381150 H3BQ85 93 aa9.13□□□□□ -0.95
SDC1-202ENST00000381150 SPART-AS1P0CW21 52 aa9.13□□□□□ -0.95
SDC1-202ENST00000381150 VPREB1P12018 145 aa9.13□□□□□ -0.95
SDC1-202ENST00000381150 WFDC10BQ8IUB3 73 aa9.13□□□□□ -0.95
SDC1-202ENST00000381150 CMYA5Q8N3K9 4069 aa9.12□□□□□ -0.95
SDC1-202ENST00000381150 KPRPQ5T749 579 aaPredicted RBP9.11□□□□□ -0.95
SDC1-202ENST00000381150 LELP1Q5T871 98 aa9.11□□□□□ -0.95
SDC1-202ENST00000381150 C1orf64Q8NEQ6 169 aa9.11□□□□□ -0.95
SDC1-202ENST00000381150 Q6ZTC4 211 aa9.11□□□□□ -0.95
SDC1-202ENST00000381150 WFDC13Q8IUB5 93 aa9.11□□□□□ -0.95
SDC1-202ENST00000381150 LINC00528Q8N1L1 170 aa9.1□□□□□ -0.95
SDC1-202ENST00000381150 TENM3Q9P273 2699 aa9.1□□□□□ -0.95
SDC1-202ENST00000381150 ST20-AS1Q8NBB2 130 aa9.09□□□□□ -0.95
SDC1-202ENST00000381150 SRRM2Q9UQ35 2752 aaKnown RBP9.09□□□□□ -0.95
SDC1-202ENST00000381150 KRTAP10-11P60412 298 aa9.09□□□□□ -0.95
SDC1-202ENST00000381150 Q6ZRP5 223 aa9.08□□□□□ -0.96
SDC1-202ENST00000381150 STAB1Q9NY15 2570 aa9.08□□□□□ -0.96
SDC1-202ENST00000381150 OXLD1Q5BKU9 147 aa9.08□□□□□ -0.96
SDC1-202ENST00000381150 C1orf137Q5JT78 98 aa9.08□□□□□ -0.96
SDC1-202ENST00000381150 F8WDY8 70 aa9.07□□□□□ -0.96
SDC1-202ENST00000381150 PRR34Q9NV39 138 aa9.07□□□□□ -0.96
SDC1-202ENST00000381150 K7EQZ3 153 aa9.07□□□□□ -0.96
SDC1-202ENST00000381150 UBE2BP63146 152 aa9.07□□□□□ -0.96
SDC1-202ENST00000381150 Q8N377 158 aa9.07□□□□□ -0.96
SDC1-202ENST00000381150 ETDCA0A1B0GVM5 59 aa9.06□□□□□ -0.96
SDC1-202ENST00000381150 ERC2-IT1O76042 136 aa9.05□□□□□ -0.96
SDC1-202ENST00000381150 SPTSSBQ8NFR3 76 aa9.05□□□□□ -0.96
SDC1-202ENST00000381150 A8MUN3 132 aa9.04□□□□□ -0.96
SDC1-202ENST00000381150 EGFEM1PQ0D2K5 195 aa9.04□□□□□ -0.96
SDC1-202ENST00000381150 PMAIP1Q13794 54 aa9.04□□□□□ -0.96
SDC1-202ENST00000381150 SERTAD4-AS1Q5TG53 156 aa9.04□□□□□ -0.96
SDC1-202ENST00000381150 DNAH3Q8TD57 4116 aa9.04□□□□□ -0.96
SDC1-202ENST00000381150 hDV103S1A0JD37 113 aa9.04□□□□□ -0.96
SDC1-202ENST00000381150 A0A1W2PNM2 257 aa9.03□□□□□ -0.96
SDC1-202ENST00000381150 RETNQ9HD89 108 aa9.03□□□□□ -0.96
SDC1-202ENST00000381150 C7orf33Q8WU49 177 aa9.03□□□□□ -0.96
SDC1-202ENST00000381150 FAM168BA1KXE4 195 aa9.02□□□□□ -0.96
SDC1-202ENST00000381150 KRTAP24-1Q3LI83 254 aa9.02□□□□□ -0.96
SDC1-202ENST00000381150 A8MU10 97 aa9.02□□□□□ -0.97
SDC1-202ENST00000381150 SYCNQ0VAF6 134 aa9.02□□□□□ -0.97
SDC1-202ENST00000381150 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.01□□□□□ -0.97
SDC1-202ENST00000381150 TRAV22A0A0B4J277 110 aa9.01□□□□□ -0.97
SDC1-202ENST00000381150 LINC00208Q96KT6 92 aa9.01□□□□□ -0.97
SDC1-202ENST00000381150 GVQW2A0A096LPI5 108 aaPredicted RBP9.01□□□□□ -0.97
SDC1-202ENST00000381150 H3BNG1 76 aa9□□□□□ -0.97
SDC1-202ENST00000381150 C15orf56Q8N910 161 aa8.98□□□□□ -0.97
SDC1-202ENST00000381150 MGAM2Q2M2H8 2515 aa8.98□□□□□ -0.97
SDC1-202ENST00000381150 CHKB-CPT1BH3BT56 60 aa8.98□□□□□ -0.97
SDC1-202ENST00000381150 RPL37AP61513 92 aaKnown RBP8.98□□□□□ -0.97
SDC1-202ENST00000381150 A0A096LNI7 61 aa8.97□□□□□ -0.97
SDC1-202ENST00000381150 KRTAP26-1Q6PEX3 210 aa8.97□□□□□ -0.97
SDC1-202ENST00000381150 COL7A1Q02388 2944 aa8.97□□□□□ -0.97
SDC1-202ENST00000381150 MP68P56378 58 aa8.96□□□□□ -0.97
SDC1-202ENST00000381150 PSCAO43653 123 aa8.95□□□□□ -0.98
SDC1-202ENST00000381150 DSCR10P59022 87 aa8.95□□□□□ -0.98
SDC1-202ENST00000381150 HCG22E2RYF7 251 aa8.95□□□□□ -0.98
SDC1-202ENST00000381150 Q8NBF4 154 aa8.95□□□□□ -0.98
SDC1-202ENST00000381150 Q9BRP9 147 aa8.94□□□□□ -0.98
SDC1-202ENST00000381150 A0A087WSZ3 146 aa8.94□□□□□ -0.98
SDC1-202ENST00000381150 Q6ZRX8 168 aa8.92□□□□□ -0.98
SDC1-202ENST00000381150 PRR15LQ9BU68 103 aa8.92□□□□□ -0.98
SDC1-202ENST00000381150 DHRS4-AS1Q9P1J3 65 aa8.92□□□□□ -0.98
SDC1-202ENST00000381150 IGLV5-48A0A075B6I7 105 aa8.91□□□□□ -0.98
SDC1-202ENST00000381150 IGKV2-24A0A0C4DH68 120 aa8.91□□□□□ -0.98
SDC1-202ENST00000381150 KCNQ1DNQ9H478 68 aa8.91□□□□□ -0.98
SDC1-202ENST00000381150 PRR15Q8IV56 129 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 148.1 ms