RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 HERVK_113P61574 105 aa9.41□□□□□ -0.9
SMN2-201ENST00000380741 S100A7L2Q5SY68 101 aa9.41□□□□□ -0.9
SMN2-201ENST00000380741 FABP4P15090 132 aa9.4□□□□□ -0.9
SMN2-201ENST00000380741 SEC61BP60468 96 aaKnown RBP9.4□□□□□ -0.9
SMN2-201ENST00000380741 HSPB8Q9UJY1 196 aa9.4□□□□□ -0.9
SMN2-201ENST00000380741 TRAV23DV6A0A075B6W5 121 aa9.39□□□□□ -0.91
SMN2-201ENST00000380741 SLC25A20O43772 301 aa9.39□□□□□ -0.91
SMN2-201ENST00000380741 IGKCP01834 107 aa9.39□□□□□ -0.91
SMN2-201ENST00000380741 SOSTDC1Q6X4U4 206 aa9.39□□□□□ -0.91
SMN2-201ENST00000380741 KRTAP9-6A0A140TA67 174 aa9.38□□□□□ -0.91
SMN2-201ENST00000380741 EIF4EBP3O60516 100 aaPredicted RBP9.38□□□□□ -0.91
SMN2-201ENST00000380741 NPC2P61916 151 aa9.38□□□□□ -0.91
SMN2-201ENST00000380741 JOSD1Q15040 202 aaPredicted RBP9.37□□□□□ -0.91
SMN2-201ENST00000380741 C9orf153Q5TBE3 101 aa9.37□□□□□ -0.91
SMN2-201ENST00000380741 A0A0J9YXY3 114 aa9.36□□□□□ -0.91
SMN2-201ENST00000380741 ZNF73O43830 326 aaPredicted RBP9.36□□□□□ -0.91
SMN2-201ENST00000380741 ADAMTSL4-AS1Q5T5F5 129 aa9.36□□□□□ -0.91
SMN2-201ENST00000380741 ST20-AS1Q8NBB2 130 aa9.36□□□□□ -0.91
SMN2-201ENST00000380741 LINC01547P58512 204 aaPredicted RBP9.35□□□□□ -0.91
SMN2-201ENST00000380741 XP32Q5T750 250 aa9.33□□□□□ -0.92
SMN2-201ENST00000380741 E9PLD3 99 aa9.32□□□□□ -0.92
SMN2-201ENST00000380741 C5orf52A6NGY3 159 aa9.29□□□□□ -0.92
SMN2-201ENST00000380741 HINT1P49773 126 aaPredicted RBP9.29□□□□□ -0.92
SMN2-201ENST00000380741 LITAFQ99732 161 aa9.28□□□□□ -0.92
SMN2-201ENST00000380741 SPANXCQ9NY87 97 aa9.28□□□□□ -0.92
SMN2-201ENST00000380741 CBY1Q9Y3M2 126 aa9.28□□□□□ -0.92
SMN2-201ENST00000380741 COLCA2A8K830 154 aa9.27□□□□□ -0.93
SMN2-201ENST00000380741 LINC00308Q8TCZ7 52 aa9.27□□□□□ -0.93
SMN2-201ENST00000380741 SPRR1BP22528 89 aa9.26□□□□□ -0.93
SMN2-201ENST00000380741 OR13C6PQ8NH95 151 aa9.26□□□□□ -0.93
SMN2-201ENST00000380741 SYS1-DBNDD2H3BUS1 97 aa9.25□□□□□ -0.93
SMN2-201ENST00000380741 HRCT1Q6UXD1 115 aa9.24□□□□□ -0.93
SMN2-201ENST00000380741 DHRS4-AS1Q9P1J3 65 aa9.24□□□□□ -0.93
SMN2-201ENST00000380741 TIMM17BO60830 172 aa9.23□□□□□ -0.93
SMN2-201ENST00000380741 SLC25A34Q6PIV7 304 aa9.23□□□□□ -0.93
SMN2-201ENST00000380741 LIMD2Q9BT23 127 aa9.23□□□□□ -0.93
SMN2-201ENST00000380741 SPANXDQ9BXN6 97 aa9.22□□□□□ -0.93
SMN2-201ENST00000380741 SLC7A5P1Q8MH63 180 aa9.21□□□□□ -0.94
SMN2-201ENST00000380741 LAMTOR3Q9UHA4 124 aa9.21□□□□□ -0.94
SMN2-201ENST00000380741 ZNF815PA8K554 130 aa9.2□□□□□ -0.94
SMN2-201ENST00000380741 ELOF1P60002 83 aaKnown RBP9.2□□□□□ -0.94
SMN2-201ENST00000380741 LINC01545Q5VT33 79 aa9.2□□□□□ -0.94
SMN2-201ENST00000380741 TTTY13Q9BZ97 58 aa9.2□□□□□ -0.94
SMN2-201ENST00000380741 C9orf92A6NGG3 77 aa9.19□□□□□ -0.94
SMN2-201ENST00000380741 COX7BP24311 80 aa9.19□□□□□ -0.94
SMN2-201ENST00000380741 C6orf99Q4VX62 202 aa9.19□□□□□ -0.94
SMN2-201ENST00000380741 HIST1H2BKO60814 126 aa9.18□□□□□ -0.94
SMN2-201ENST00000380741 HIST1H2BJP06899 126 aa9.18□□□□□ -0.94
SMN2-201ENST00000380741 HIST1H2BOP23527 126 aa9.18□□□□□ -0.94
SMN2-201ENST00000380741 HIST1H2BBP33778 126 aa9.18□□□□□ -0.94
SMN2-201ENST00000380741 HIST1H2BDP58876 126 aa9.18□□□□□ -0.94
SMN2-201ENST00000380741 HIST1H2BCP62807 126 aa9.18□□□□□ -0.94
SMN2-201ENST00000380741 HIST2H2BEQ16778 126 aa9.18□□□□□ -0.94
SMN2-201ENST00000380741 Q1RN00 199 aa9.18□□□□□ -0.94
SMN2-201ENST00000380741 KRTAP19-2Q3LHN2 52 aa9.18□□□□□ -0.94
SMN2-201ENST00000380741 PCOTHQ58A44 107 aa9.18□□□□□ -0.94
SMN2-201ENST00000380741 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.18□□□□□ -0.94
SMN2-201ENST00000380741 HIST1H2BHQ93079 126 aa9.18□□□□□ -0.94
SMN2-201ENST00000380741 HIST1H2BNQ99877 126 aa9.18□□□□□ -0.94
SMN2-201ENST00000380741 HIST1H2BMQ99879 126 aa9.18□□□□□ -0.94
SMN2-201ENST00000380741 PET117Q6UWS5 81 aa9.17□□□□□ -0.94
SMN2-201ENST00000380741 LINC00518Q8N0U6 118 aa9.17□□□□□ -0.94
SMN2-201ENST00000380741 DEFB105AQ8NG35 78 aa9.16□□□□□ -0.94
SMN2-201ENST00000380741 CD164Q04900 197 aa9.15□□□□□ -0.94
SMN2-201ENST00000380741 TAL2Q16559 108 aa9.15□□□□□ -0.94
SMN2-201ENST00000380741 IGLV8-61A0A075B6I0 122 aa9.14□□□□□ -0.95
SMN2-201ENST00000380741 GHRHP01286 108 aa9.14□□□□□ -0.95
SMN2-201ENST00000380741 FSIP2Q5CZC0 6907 aa9.13□□□□□ -0.95
SMN2-201ENST00000380741 TEX49A0A1B0GTD5 131 aa9.13□□□□□ -0.95
SMN2-201ENST00000380741 PRO1933Q9H354 126 aa9.13□□□□□ -0.95
SMN2-201ENST00000380741 H7C2G1 150 aa9.12□□□□□ -0.95
SMN2-201ENST00000380741 C3orf79P0CE67 100 aa9.12□□□□□ -0.95
SMN2-201ENST00000380741 TRBV7-6A0A0J9YX20 115 aa9.11□□□□□ -0.95
SMN2-201ENST00000380741 MT1HP80294 61 aa9.11□□□□□ -0.95
SMN2-201ENST00000380741 SMIM29Q86T20 159 aa9.11□□□□□ -0.95
SMN2-201ENST00000380741 SCGB1D4Q6XE38 83 aa9.1□□□□□ -0.95
SMN2-201ENST00000380741 A0A1B0GWB2 263 aa9.09□□□□□ -0.95
SMN2-201ENST00000380741 Q5XG85 94 aa9.09□□□□□ -0.95
SMN2-201ENST00000380741 IGLV5-48A0A075B6I7 105 aa9.08□□□□□ -0.96
SMN2-201ENST00000380741 AKR1D1P51857 326 aa9.08□□□□□ -0.96
SMN2-201ENST00000380741 A0A0G2JQZ4 141 aa9.07□□□□□ -0.96
SMN2-201ENST00000380741 KRTDAPP60985 99 aa9.07□□□□□ -0.96
SMN2-201ENST00000380741 C1orf195Q5TG92 126 aa9.07□□□□□ -0.96
SMN2-201ENST00000380741 CRCT1Q9UGL9 99 aa9.07□□□□□ -0.96
SMN2-201ENST00000380741 A6NDN8 102 aa9.06□□□□□ -0.96
SMN2-201ENST00000380741 ANKRD39Q53RE8 183 aa9.06□□□□□ -0.96
SMN2-201ENST00000380741 COPS9Q8WXC6 57 aa9.06□□□□□ -0.96
SMN2-201ENST00000380741 IFITM1P13164 125 aa9.05□□□□□ -0.96
SMN2-201ENST00000380741 CFC1BP0CG36 223 aa9.03□□□□□ -0.96
SMN2-201ENST00000380741 MUSTN1Q8IVN3 82 aa9.03□□□□□ -0.96
SMN2-201ENST00000380741 COA6Q5JTJ3 125 aaKnown RBP9.02□□□□□ -0.97
SMN2-201ENST00000380741 Q6ZVH6 145 aa9.02□□□□□ -0.97
SMN2-201ENST00000380741 ATOH7Q8N100 152 aa9.02□□□□□ -0.97
SMN2-201ENST00000380741 C20orf202A1L168 122 aa9.01□□□□□ -0.97
SMN2-201ENST00000380741 A4D1N5 150 aa9.01□□□□□ -0.97
SMN2-201ENST00000380741 RPL37P61927 97 aaKnown RBP9.01□□□□□ -0.97
SMN2-201ENST00000380741 PCP2Q8IVA1 136 aa9.01□□□□□ -0.97
SMN2-201ENST00000380741 SMIM11BQ8TCY0 68 aa8.99□□□□□ -0.97
SMN2-201ENST00000380741 NHP2Q9NX24 153 aaKnown RBP8.99□□□□□ -0.97
SMN2-201ENST00000380741 FLGP20930 4061 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms