RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 PRR15Q8IV56 129 aa10.57□□□□□ -0.72
COL2A1-202ENST00000380518 IGLV8-61A0A075B6I0 122 aa10.56□□□□□ -0.72
COL2A1-202ENST00000380518 Q8N377 158 aa10.56□□□□□ -0.72
COL2A1-202ENST00000380518 COA5Q86WW8 74 aa10.55□□□□□ -0.72
COL2A1-202ENST00000380518 K7EIL1 84 aa10.55□□□□□ -0.72
COL2A1-202ENST00000380518 KLKP1Q107X0 134 aa10.55□□□□□ -0.72
COL2A1-202ENST00000380518 KRTAP10-11P60412 298 aa10.55□□□□□ -0.72
COL2A1-202ENST00000380518 C9orf129Q5T035 196 aaKnown RBP10.55□□□□□ -0.72
COL2A1-202ENST00000380518 C8orf17Q9NRJ1 99 aa10.53□□□□□ -0.72
COL2A1-202ENST00000380518 TLX1NBP0CAT3 122 aa10.53□□□□□ -0.72
COL2A1-202ENST00000380518 SSBP3-AS1Q7Z2R9 100 aa10.53□□□□□ -0.72
COL2A1-202ENST00000380518 CYP4F30PQ9H0H9 118 aa10.53□□□□□ -0.72
COL2A1-202ENST00000380518 A8MUN3 132 aa10.52□□□□□ -0.72
COL2A1-202ENST00000380518 PLA2G2DQ9UNK4 145 aa10.52□□□□□ -0.73
COL2A1-202ENST00000380518 LINC01600Q96MT4 127 aa10.52□□□□□ -0.73
COL2A1-202ENST00000380518 ZNF861PO60384 105 aa10.51□□□□□ -0.73
COL2A1-202ENST00000380518 ATRQ13535 2644 aa10.5□□□□□ -0.73
COL2A1-202ENST00000380518 C9orf163Q8N9P6 203 aa10.5□□□□□ -0.73
COL2A1-202ENST00000380518 A0A1B0GVX0 72 aa10.49□□□□□ -0.73
COL2A1-202ENST00000380518 MAST4O15021 2626 aa10.48□□□□□ -0.73
COL2A1-202ENST00000380518 KRTAP10-3P60369 221 aa10.47□□□□□ -0.73
COL2A1-202ENST00000380518 UQCR11O14957 56 aa10.47□□□□□ -0.73
COL2A1-202ENST00000380518 DSCR10P59022 87 aa10.46□□□□□ -0.73
COL2A1-202ENST00000380518 A0A087WTM6 91 aa10.45□□□□□ -0.74
COL2A1-202ENST00000380518 UTRNP46939 3433 aa10.44□□□□□ -0.74
COL2A1-202ENST00000380518 A0A0G2JQZ4 141 aa10.42□□□□□ -0.74
COL2A1-202ENST00000380518 A0A1W2PNN7 141 aa10.42□□□□□ -0.74
COL2A1-202ENST00000380518 BPTFQ12830 3046 aa10.42□□□□□ -0.74
COL2A1-202ENST00000380518 H7BZZ5 65 aa10.42□□□□□ -0.74
COL2A1-202ENST00000380518 LINC00304Q8N9R0 145 aa10.42□□□□□ -0.74
COL2A1-202ENST00000380518 A0A1W2PNM2 257 aa10.39□□□□□ -0.75
COL2A1-202ENST00000380518 OBSCN-AS1Q96MR7 158 aa10.38□□□□□ -0.75
COL2A1-202ENST00000380518 CNBPP62633 177 aaKnown RBP10.37□□□□□ -0.75
COL2A1-202ENST00000380518 FLNAP21333 2647 aaKnown RBP10.35□□□□□ -0.75
COL2A1-202ENST00000380518 IGLV7-43P04211 117 aa10.35□□□□□ -0.75
COL2A1-202ENST00000380518 DNAH12Q6ZR08 3092 aa10.35□□□□□ -0.75
COL2A1-202ENST00000380518 CASC10Q5T4H9 136 aa10.35□□□□□ -0.75
COL2A1-202ENST00000380518 SPRR4Q96PI1 79 aa10.35□□□□□ -0.75
COL2A1-202ENST00000380518 PSORS1C2Q9UIG4 136 aa10.34□□□□□ -0.75
COL2A1-202ENST00000380518 ANAPC11Q9NYG5 84 aa10.34□□□□□ -0.75
COL2A1-202ENST00000380518 MIR22HGQ0VDD5 57 aa10.33□□□□□ -0.76
COL2A1-202ENST00000380518 SPINT4Q6UDR6 99 aa10.33□□□□□ -0.76
COL2A1-202ENST00000380518 KRTAP1-3Q8IUG1 177 aa10.33□□□□□ -0.76
COL2A1-202ENST00000380518 IGLV5-48A0A075B6I7 105 aa10.32□□□□□ -0.76
COL2A1-202ENST00000380518 J3QL48 77 aa10.32□□□□□ -0.76
COL2A1-202ENST00000380518 APLNQ9ULZ1 77 aa10.31□□□□□ -0.76
COL2A1-202ENST00000380518 ZNF575Q86XF7 245 aa10.31□□□□□ -0.76
COL2A1-202ENST00000380518 IGLV5-37A0A075B6J1 123 aa10.3□□□□□ -0.76
COL2A1-202ENST00000380518 C9orf92A6NGG3 77 aa10.29□□□□□ -0.76
COL2A1-202ENST00000380518 LINC00336Q6ZUF6 198 aa10.29□□□□□ -0.76
COL2A1-202ENST00000380518 SPANXA2-OT1Q8N9U9 137 aa10.28□□□□□ -0.76
COL2A1-202ENST00000380518 KRTAP1-1Q07627 177 aa10.28□□□□□ -0.76
COL2A1-202ENST00000380518 ITPR3Q14573 2671 aa10.28□□□□□ -0.76
COL2A1-202ENST00000380518 CEP350Q5VT06 3117 aa10.28□□□□□ -0.76
COL2A1-202ENST00000380518 COX6B2Q6YFQ2 88 aa10.26□□□□□ -0.77
COL2A1-202ENST00000380518 SMR3BP02814 79 aaPredicted RBP10.25□□□□□ -0.77
COL2A1-202ENST00000380518 CRIPTQ9P021 101 aa10.23□□□□□ -0.77
COL2A1-202ENST00000380518 HELZ2Q9BYK8 2649 aaKnown RBP10.23□□□□□ -0.77
COL2A1-202ENST00000380518 FAM104AQ969W3 186 aa10.19□□□□□ -0.78
COL2A1-202ENST00000380518 OCR1Q9BZK8 76 aa10.18□□□□□ -0.78
COL2A1-202ENST00000380518 CENPEQ02224 2701 aa10.18□□□□□ -0.78
COL2A1-202ENST00000380518 CR1P17927 2039 aa10.15□□□□□ -0.78
COL2A1-202ENST00000380518 STAB1Q9NY15 2570 aa10.14□□□□□ -0.79
COL2A1-202ENST00000380518 Q8N1X5 172 aa10.13□□□□□ -0.79
COL2A1-202ENST00000380518 RBM12B-AS1Q9P1G2 102 aa10.12□□□□□ -0.79
COL2A1-202ENST00000380518 KTN1-AS1Q86SY8 53 aa10.12□□□□□ -0.79
COL2A1-202ENST00000380518 CFAP46Q8IYW2 2715 aa10.12□□□□□ -0.79
COL2A1-202ENST00000380518 CD164Q04900 197 aa10.12□□□□□ -0.79
COL2A1-202ENST00000380518 PCNTO95613 3336 aa10.09□□□□□ -0.79
COL2A1-202ENST00000380518 CDC42SE1Q9NRR8 79 aa10.09□□□□□ -0.79
COL2A1-202ENST00000380518 AKAP13Q12802 2813 aa10.09□□□□□ -0.79
COL2A1-202ENST00000380518 LCA10Q71F78 164 aa10.08□□□□□ -0.8
COL2A1-202ENST00000380518 PRR26Q8N8Z3 221 aa10.07□□□□□ -0.8
COL2A1-202ENST00000380518 TNP2Q05952 138 aa10.06□□□□□ -0.8
COL2A1-202ENST00000380518 WIPF1O43516 503 aa10.05□□□□□ -0.8
COL2A1-202ENST00000380518 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.03□□□□□ -0.8
COL2A1-202ENST00000380518 Q1T7F1 81 aa10.03□□□□□ -0.8
COL2A1-202ENST00000380518 A0A0D9SG42 100 aa10.02□□□□□ -0.81
COL2A1-202ENST00000380518 IGLV7-46A0A075B6I9 117 aa10.02□□□□□ -0.81
COL2A1-202ENST00000380518 LINC01554Q52M75 96 aa10□□□□□ -0.81
COL2A1-202ENST00000380518 SPRR1AP35321 89 aa9.98□□□□□ -0.81
COL2A1-202ENST00000380518 CHD6Q8TD26 2715 aa9.97□□□□□ -0.81
COL2A1-202ENST00000380518 FAM229BQ4G0N7 80 aa9.96□□□□□ -0.81
COL2A1-202ENST00000380518 CHD7Q9P2D1 2997 aa9.96□□□□□ -0.82
COL2A1-202ENST00000380518 HRES1P13985 223 aa9.96□□□□□ -0.82
COL2A1-202ENST00000380518 Q8NDZ9 215 aa9.95□□□□□ -0.82
COL2A1-202ENST00000380518 MMP24-AS1A0A0U1RRL7 71 aa9.93□□□□□ -0.82
COL2A1-202ENST00000380518 TEP1Q99973 2627 aaKnown RBP9.92□□□□□ -0.82
COL2A1-202ENST00000380518 PLAC8Q9NZF1 115 aa9.91□□□□□ -0.82
COL2A1-202ENST00000380518 Q6ZSA8 131 aa9.9□□□□□ -0.82
COL2A1-202ENST00000380518 A0A1B0GU33 70 aa9.89□□□□□ -0.83
COL2A1-202ENST00000380518 NBEAL1Q6ZS30 2694 aa9.89□□□□□ -0.83
COL2A1-202ENST00000380518 TEX15Q9BXT5 2789 aa9.88□□□□□ -0.83
COL2A1-202ENST00000380518 SPRR1BP22528 89 aa9.88□□□□□ -0.83
COL2A1-202ENST00000380518 Q75L30 129 aa9.88□□□□□ -0.83
COL2A1-202ENST00000380518 C5orf42Q9H799 3197 aa9.86□□□□□ -0.83
COL2A1-202ENST00000380518 SETXQ7Z333 2677 aaKnown RBP9.85□□□□□ -0.83
COL2A1-202ENST00000380518 Q8N9P0 234 aaPredicted RBP9.84□□□□□ -0.83
COL2A1-202ENST00000380518 LINC01558Q9Y6Z2 57 aa9.84□□□□□ -0.83
COL2A1-202ENST00000380518 ZCCHC13Q8WW36 166 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms