RNA–Protein interactions for RNA: ENST00000378543.2

FAAP20-201, Transcript of FA core complex associated protein 20, humanhuman

TSL 2

Gene FAAP20, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-201ENST00000378543 S100A2P29034 98 aa13.7□□□□□ -0.22
FAAP20-201ENST00000378543 NPC2P61916 151 aa13.7□□□□□ -0.22
FAAP20-201ENST00000378543 TRAV23DV6A0A075B6W5 121 aa13.69□□□□□ -0.22
FAAP20-201ENST00000378543 HIST3H2BBQ8N257 126 aa13.69□□□□□ -0.22
FAAP20-201ENST00000378543 EIF4EBP3O60516 100 aaPredicted RBP13.68□□□□□ -0.22
FAAP20-201ENST00000378543 JOSD1Q15040 202 aaPredicted RBP13.68□□□□□ -0.22
FAAP20-201ENST00000378543 SCGB1D4Q6XE38 83 aa13.68□□□□□ -0.22
FAAP20-201ENST00000378543 Q6ZRX8 168 aa13.68□□□□□ -0.22
FAAP20-201ENST00000378543 SMCR5Q8TEV8 140 aa13.68□□□□□ -0.22
FAAP20-201ENST00000378543 PPDPFQ9H3Y8 114 aa13.68□□□□□ -0.22
FAAP20-201ENST00000378543 S100A6P06703 90 aa13.67□□□□□ -0.22
FAAP20-201ENST00000378543 LINC00518Q8N0U6 118 aa13.67□□□□□ -0.22
FAAP20-201ENST00000378543 LINC00304Q8N9R0 145 aa13.67□□□□□ -0.22
FAAP20-201ENST00000378543 Q6ZVH6 145 aa13.66□□□□□ -0.22
FAAP20-201ENST00000378543 HIST1H2BLQ99880 126 aa13.66□□□□□ -0.22
FAAP20-201ENST00000378543 SPANXDQ9BXN6 97 aa13.66□□□□□ -0.22
FAAP20-201ENST00000378543 TTTY13Q9BZ97 58 aa13.66□□□□□ -0.22
FAAP20-201ENST00000378543 ZNF73O43830 326 aaPredicted RBP13.65□□□□□ -0.22
FAAP20-201ENST00000378543 HINT1P49773 126 aaPredicted RBP13.65□□□□□ -0.22
FAAP20-201ENST00000378543 ANKRD39Q53RE8 183 aa13.65□□□□□ -0.22
FAAP20-201ENST00000378543 C3orf22Q8N5N4 141 aa13.64□□□□□ -0.23
FAAP20-201ENST00000378543 IFITM1P13164 125 aa13.63□□□□□ -0.23
FAAP20-201ENST00000378543 LINC00483Q53H64 154 aa13.63□□□□□ -0.23
FAAP20-201ENST00000378543 ATOH7Q8N100 152 aa13.63□□□□□ -0.23
FAAP20-201ENST00000378543 C5orf52A6NGY3 159 aa13.61□□□□□ -0.23
FAAP20-201ENST00000378543 SPAG11AQ6PDA7 123 aa13.61□□□□□ -0.23
FAAP20-201ENST00000378543 RETNLBQ9BQ08 111 aa13.61□□□□□ -0.23
FAAP20-201ENST00000378543 OR13C6PQ8NH95 151 aa13.59□□□□□ -0.23
FAAP20-201ENST00000378543 Q9BRP9 147 aa13.59□□□□□ -0.23
FAAP20-201ENST00000378543 HSBP1L1C9JCN9 74 aa13.58□□□□□ -0.24
FAAP20-201ENST00000378543 PCP2Q8IVA1 136 aa13.56□□□□□ -0.24
FAAP20-201ENST00000378543 ERC2-IT1O76042 136 aa13.54□□□□□ -0.24
FAAP20-201ENST00000378543 GAGE2AQ6NT46 116 aa13.54□□□□□ -0.24
FAAP20-201ENST00000378543 DHRS4-AS1Q9P1J3 65 aa13.53□□□□□ -0.24
FAAP20-201ENST00000378543 C4orf48Q5BLP8 95 aa13.52□□□□□ -0.25
FAAP20-201ENST00000378543 TRBV7-6A0A0J9YX20 115 aa13.49□□□□□ -0.25
FAAP20-201ENST00000378543 SSBP3-AS1Q7Z2R9 100 aa13.49□□□□□ -0.25
FAAP20-201ENST00000378543 MUSTN1Q8IVN3 82 aa13.48□□□□□ -0.25
FAAP20-201ENST00000378543 ELOF1P60002 83 aaKnown RBP13.47□□□□□ -0.25
FAAP20-201ENST00000378543 Q8NBF4 154 aa13.47□□□□□ -0.25
FAAP20-201ENST00000378543 SPINK1P00995 79 aa13.46□□□□□ -0.25
FAAP20-201ENST00000378543 IGLV7-46A0A075B6I9 117 aa13.45□□□□□ -0.26
FAAP20-201ENST00000378543 TRAV13-2A0A0B4J235 113 aa13.45□□□□□ -0.26
FAAP20-201ENST00000378543 COX7BP24311 80 aa13.45□□□□□ -0.26
FAAP20-201ENST00000378543 C6orf99Q4VX62 202 aa13.45□□□□□ -0.26
FAAP20-201ENST00000378543 SLC25A34Q6PIV7 304 aa13.45□□□□□ -0.26
FAAP20-201ENST00000378543 SCGB1D1O95968 90 aa13.44□□□□□ -0.26
FAAP20-201ENST00000378543 MUC2Q02817 5179 aa13.44□□□□□ -0.26
FAAP20-201ENST00000378543 A6NDN8 102 aa13.43□□□□□ -0.26
FAAP20-201ENST00000378543 IGLV9-49A0A0B4J1Y8 123 aa13.42□□□□□ -0.26
FAAP20-201ENST00000378543 RPS29P62273 56 aaKnown RBP13.42□□□□□ -0.26
FAAP20-201ENST00000378543 MOBPQ13875 183 aa13.42□□□□□ -0.26
FAAP20-201ENST00000378543 TPRXLQ17RH7 258 aa13.42□□□□□ -0.26
FAAP20-201ENST00000378543 A0A1B0GWB2 263 aa13.41□□□□□ -0.26
FAAP20-201ENST00000378543 SPRR1BP22528 89 aa13.41□□□□□ -0.26
FAAP20-201ENST00000378543 A4D1N5 150 aa13.4□□□□□ -0.26
FAAP20-201ENST00000378543 ST20-AS1Q8NBB2 130 aa13.39□□□□□ -0.27
FAAP20-201ENST00000378543 CDIP1Q9H305 208 aa13.39□□□□□ -0.27
FAAP20-201ENST00000378543 FP248Q71RG6 208 aaPredicted RBP13.38□□□□□ -0.27
FAAP20-201ENST00000378543 C9orf153Q5TBE3 101 aa13.35□□□□□ -0.27
FAAP20-201ENST00000378543 DLEU1O43261 78 aa13.34□□□□□ -0.27
FAAP20-201ENST00000378543 COX8AP10176 69 aa13.34□□□□□ -0.27
FAAP20-201ENST00000378543 NHP2Q9NX24 153 aaKnown RBP13.34□□□□□ -0.27
FAAP20-201ENST00000378543 LAMTOR3Q9UHA4 124 aa13.34□□□□□ -0.27
FAAP20-201ENST00000378543 TEX49A0A1B0GTD5 131 aa13.31□□□□□ -0.28
FAAP20-201ENST00000378543 MUC17Q685J3 4493 aa13.31□□□□□ -0.28
FAAP20-201ENST00000378543 VAMP3Q15836 100 aa13.3□□□□□ -0.28
FAAP20-201ENST00000378543 TAL2Q16559 108 aa13.3□□□□□ -0.28
FAAP20-201ENST00000378543 SMIM11BQ8TCY0 68 aa13.3□□□□□ -0.28
FAAP20-201ENST00000378543 A0A0U1RQV1 116 aa13.28□□□□□ -0.28
FAAP20-201ENST00000378543 SLC25A20O43772 301 aa13.28□□□□□ -0.28
FAAP20-201ENST00000378543 HIST1H4GQ99525 98 aa13.28□□□□□ -0.28
FAAP20-201ENST00000378543 IGLV5-48A0A075B6I7 105 aa13.25□□□□□ -0.29
FAAP20-201ENST00000378543 Q8N377 158 aa13.25□□□□□ -0.29
FAAP20-201ENST00000378543 KRTAP13-3Q3SY46 172 aa13.23□□□□□ -0.29
FAAP20-201ENST00000378543 VAMP8Q9BV40 100 aa13.23□□□□□ -0.29
FAAP20-201ENST00000378543 HIGD1BQ9P298 99 aa13.23□□□□□ -0.29
FAAP20-201ENST00000378543 SPATA45Q537H7 98 aa13.22□□□□□ -0.29
FAAP20-201ENST00000378543 DEFB105AQ8NG35 78 aa13.22□□□□□ -0.29
FAAP20-201ENST00000378543 PAM16Q9Y3D7 125 aa13.21□□□□□ -0.29
FAAP20-201ENST00000378543 LINC01547P58512 204 aaPredicted RBP13.19□□□□□ -0.3
FAAP20-201ENST00000378543 CD164Q04900 197 aa13.19□□□□□ -0.3
FAAP20-201ENST00000378543 C14orf144Q96I85 54 aa13.19□□□□□ -0.3
FAAP20-201ENST00000378543 LIMD2Q9BT23 127 aa13.19□□□□□ -0.3
FAAP20-201ENST00000378543 PRO1933Q9H354 126 aa13.19□□□□□ -0.3
FAAP20-201ENST00000378543 Q1RN00 199 aa13.17□□□□□ -0.3
FAAP20-201ENST00000378543 BVES-AS1Q5T3Y7 98 aa13.17□□□□□ -0.3
FAAP20-201ENST00000378543 LINC00575Q6W349 94 aa13.17□□□□□ -0.3
FAAP20-201ENST00000378543 SMIM29Q86T20 159 aa13.16□□□□□ -0.3
FAAP20-201ENST00000378543 hADV29S1A0JD25 119 aa13.14□□□□□ -0.31
FAAP20-201ENST00000378543 FAT4Q6V0I7 4981 aa13.12□□□□□ -0.31
FAAP20-201ENST00000378543 LCE2AQ5TA79 106 aaPredicted RBP13.11□□□□□ -0.31
FAAP20-201ENST00000378543 C12orf57Q99622 126 aa13.11□□□□□ -0.31
FAAP20-201ENST00000378543 A0A0B4J2C4 111 aa13.1□□□□□ -0.31
FAAP20-201ENST00000378543 RAB37Q96AX2 223 aa13.1□□□□□ -0.31
FAAP20-201ENST00000378543 H7C2G1 150 aa13.09□□□□□ -0.31
FAAP20-201ENST00000378543 CFC1BP0CG36 223 aa13.09□□□□□ -0.31
FAAP20-201ENST00000378543 CFC1P0CG37 223 aa13.09□□□□□ -0.31
FAAP20-201ENST00000378543 F8WEM9 126 aa13.08□□□□□ -0.32
FAAP20-201ENST00000378543 Q5XG85 94 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms