RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 ZNF706Q9Y5V0 76 aaPredicted RBP9.9□□□□□ -0.83
RER1-202ENST00000378512 MUC2Q02817 5179 aa9.89□□□□□ -0.83
RER1-202ENST00000378512 S100A7L2Q5SY68 101 aa9.89□□□□□ -0.83
RER1-202ENST00000378512 Q6ZRX8 168 aa9.89□□□□□ -0.83
RER1-202ENST00000378512 TSPAN13O95857 204 aa9.88□□□□□ -0.83
RER1-202ENST00000378512 LINC00483Q53H64 154 aa9.88□□□□□ -0.83
RER1-202ENST00000378512 ATOH7Q8N100 152 aa9.88□□□□□ -0.83
RER1-202ENST00000378512 Q9BRP9 147 aa9.88□□□□□ -0.83
RER1-202ENST00000378512 SPANXDQ9BXN6 97 aa9.88□□□□□ -0.83
RER1-202ENST00000378512 PPDPFQ9H3Y8 114 aa9.88□□□□□ -0.83
RER1-202ENST00000378512 TRAV23DV6A0A075B6W5 121 aa9.87□□□□□ -0.83
RER1-202ENST00000378512 C3orf22Q8N5N4 141 aa9.87□□□□□ -0.83
RER1-202ENST00000378512 SNRPEP62304 92 aaKnown RBP9.86□□□□□ -0.83
RER1-202ENST00000378512 LINC00304Q8N9R0 145 aa9.86□□□□□ -0.83
RER1-202ENST00000378512 ZNF73O43830 326 aaPredicted RBP9.85□□□□□ -0.83
RER1-202ENST00000378512 ERC2-IT1O76042 136 aa9.85□□□□□ -0.83
RER1-202ENST00000378512 CBY1Q9Y3M2 126 aa9.84□□□□□ -0.83
RER1-202ENST00000378512 S100A2P29034 98 aa9.83□□□□□ -0.84
RER1-202ENST00000378512 PCP2Q8IVA1 136 aa9.83□□□□□ -0.84
RER1-202ENST00000378512 SCGB1D4Q6XE38 83 aa9.82□□□□□ -0.84
RER1-202ENST00000378512 Q6ZVH6 145 aa9.82□□□□□ -0.84
RER1-202ENST00000378512 LINC00518Q8N0U6 118 aa9.82□□□□□ -0.84
RER1-202ENST00000378512 IFITM1P13164 125 aa9.82□□□□□ -0.84
RER1-202ENST00000378512 S100A6P06703 90 aa9.81□□□□□ -0.84
RER1-202ENST00000378512 JOSD1Q15040 202 aaPredicted RBP9.81□□□□□ -0.84
RER1-202ENST00000378512 C5orf52A6NGY3 159 aa9.79□□□□□ -0.84
RER1-202ENST00000378512 COPS9Q8WXC6 57 aa9.79□□□□□ -0.84
RER1-202ENST00000378512 SPAG11AQ6PDA7 123 aa9.78□□□□□ -0.84
RER1-202ENST00000378512 GAGE2AQ6NT46 116 aa9.77□□□□□ -0.85
RER1-202ENST00000378512 OR13C6PQ8NH95 151 aa9.77□□□□□ -0.85
RER1-202ENST00000378512 HINT1P49773 126 aaPredicted RBP9.75□□□□□ -0.85
RER1-202ENST00000378512 MUSTN1Q8IVN3 82 aa9.75□□□□□ -0.85
RER1-202ENST00000378512 RETNLBQ9BQ08 111 aa9.75□□□□□ -0.85
RER1-202ENST00000378512 ELOF1P60002 83 aaKnown RBP9.74□□□□□ -0.85
RER1-202ENST00000378512 Q8NBF4 154 aa9.73□□□□□ -0.85
RER1-202ENST00000378512 TRBV7-6A0A0J9YX20 115 aa9.73□□□□□ -0.85
RER1-202ENST00000378512 SSBP3-AS1Q7Z2R9 100 aa9.73□□□□□ -0.85
RER1-202ENST00000378512 DHRS4-AS1Q9P1J3 65 aa9.73□□□□□ -0.85
RER1-202ENST00000378512 HSBP1L1C9JCN9 74 aa9.72□□□□□ -0.85
RER1-202ENST00000378512 SPRR1BP22528 89 aa9.72□□□□□ -0.85
RER1-202ENST00000378512 C6orf99Q4VX62 202 aa9.72□□□□□ -0.85
RER1-202ENST00000378512 ST20-AS1Q8NBB2 130 aa9.71□□□□□ -0.86
RER1-202ENST00000378512 SPINK1P00995 79 aa9.7□□□□□ -0.86
RER1-202ENST00000378512 COX7BP24311 80 aa9.69□□□□□ -0.86
RER1-202ENST00000378512 RPS29P62273 56 aaKnown RBP9.69□□□□□ -0.86
RER1-202ENST00000378512 MOBPQ13875 183 aa9.69□□□□□ -0.86
RER1-202ENST00000378512 IGLV9-49A0A0B4J1Y8 123 aa9.68□□□□□ -0.86
RER1-202ENST00000378512 SCGB1D1O95968 90 aa9.67□□□□□ -0.86
RER1-202ENST00000378512 TPRXLQ17RH7 258 aa9.67□□□□□ -0.86
RER1-202ENST00000378512 C4orf48Q5BLP8 95 aa9.67□□□□□ -0.86
RER1-202ENST00000378512 MUC17Q685J3 4493 aa9.67□□□□□ -0.86
RER1-202ENST00000378512 TRAV13-2A0A0B4J235 113 aa9.66□□□□□ -0.86
RER1-202ENST00000378512 A0A1B0GWB2 263 aa9.66□□□□□ -0.86
RER1-202ENST00000378512 A6NDN8 102 aa9.65□□□□□ -0.86
RER1-202ENST00000378512 COX8AP10176 69 aa9.65□□□□□ -0.87
RER1-202ENST00000378512 IGLV7-46A0A075B6I9 117 aa9.64□□□□□ -0.87
RER1-202ENST00000378512 DLEU1O43261 78 aa9.64□□□□□ -0.87
RER1-202ENST00000378512 FP248Q71RG6 208 aaPredicted RBP9.64□□□□□ -0.87
RER1-202ENST00000378512 SMIM11BQ8TCY0 68 aa9.63□□□□□ -0.87
RER1-202ENST00000378512 A4D1N5 150 aa9.62□□□□□ -0.87
RER1-202ENST00000378512 SLC25A34Q6PIV7 304 aa9.62□□□□□ -0.87
RER1-202ENST00000378512 Q8N377 158 aa9.62□□□□□ -0.87
RER1-202ENST00000378512 FAT4Q6V0I7 4981 aa9.61□□□□□ -0.87
RER1-202ENST00000378512 LINC01547P58512 204 aaPredicted RBP9.61□□□□□ -0.87
RER1-202ENST00000378512 IGLV5-48A0A075B6I7 105 aa9.6□□□□□ -0.87
RER1-202ENST00000378512 C9orf153Q5TBE3 101 aa9.59□□□□□ -0.87
RER1-202ENST00000378512 TEX49A0A1B0GTD5 131 aa9.58□□□□□ -0.88
RER1-202ENST00000378512 SMIM29Q86T20 159 aa9.57□□□□□ -0.88
RER1-202ENST00000378512 LAMTOR3Q9UHA4 124 aa9.57□□□□□ -0.88
RER1-202ENST00000378512 TAL2Q16559 108 aa9.56□□□□□ -0.88
RER1-202ENST00000378512 CDIP1Q9H305 208 aa9.56□□□□□ -0.88
RER1-202ENST00000378512 HIGD1BQ9P298 99 aa9.56□□□□□ -0.88
RER1-202ENST00000378512 SLC25A20O43772 301 aa9.55□□□□□ -0.88
RER1-202ENST00000378512 HIST1H4GQ99525 98 aa9.55□□□□□ -0.88
RER1-202ENST00000378512 NHP2Q9NX24 153 aaKnown RBP9.55□□□□□ -0.88
RER1-202ENST00000378512 A0A0U1RQV1 116 aa9.54□□□□□ -0.88
RER1-202ENST00000378512 KRTAP13-3Q3SY46 172 aa9.54□□□□□ -0.88
RER1-202ENST00000378512 SPATA45Q537H7 98 aa9.54□□□□□ -0.88
RER1-202ENST00000378512 LCE2AQ5TA79 106 aaPredicted RBP9.54□□□□□ -0.88
RER1-202ENST00000378512 C14orf144Q96I85 54 aa9.54□□□□□ -0.88
RER1-202ENST00000378512 PAM16Q9Y3D7 125 aa9.54□□□□□ -0.88
RER1-202ENST00000378512 DEFB105AQ8NG35 78 aa9.53□□□□□ -0.88
RER1-202ENST00000378512 Q1RN00 199 aa9.52□□□□□ -0.89
RER1-202ENST00000378512 LINC00575Q6W349 94 aa9.52□□□□□ -0.89
RER1-202ENST00000378512 C2orf91Q6ZV80 131 aa9.52□□□□□ -0.89
RER1-202ENST00000378512 VAMP8Q9BV40 100 aa9.52□□□□□ -0.89
RER1-202ENST00000378512 CD164Q04900 197 aa9.51□□□□□ -0.89
RER1-202ENST00000378512 VAMP3Q15836 100 aa9.51□□□□□ -0.89
RER1-202ENST00000378512 PRO1933Q9H354 126 aa9.49□□□□□ -0.89
RER1-202ENST00000378512 CFC1BP0CG36 223 aa9.48□□□□□ -0.89
RER1-202ENST00000378512 CFC1P0CG37 223 aa9.48□□□□□ -0.89
RER1-202ENST00000378512 C12orf57Q99622 126 aa9.48□□□□□ -0.89
RER1-202ENST00000378512 KRTAP9-2Q9BYQ4 174 aa9.48□□□□□ -0.89
RER1-202ENST00000378512 hADV29S1A0JD25 119 aa9.47□□□□□ -0.89
RER1-202ENST00000378512 PYY3Q5JQD4 70 aa9.47□□□□□ -0.89
RER1-202ENST00000378512 LIMD2Q9BT23 127 aa9.47□□□□□ -0.89
RER1-202ENST00000378512 BVES-AS1Q5T3Y7 98 aa9.46□□□□□ -0.9
RER1-202ENST00000378512 Q5XG85 94 aa9.46□□□□□ -0.9
RER1-202ENST00000378512 A0A0B4J2C4 111 aa9.45□□□□□ -0.9
RER1-202ENST00000378512 Q6ZQY7 126 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms