RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 PLAC8L1A1L4L8 177 aa5.86□□□□□ -1.47
VPS36-201ENST00000378060 RPS28P62857 69 aaKnown RBP5.86□□□□□ -1.47
VPS36-201ENST00000378060 C6orf223Q8N319 242 aa5.86□□□□□ -1.47
VPS36-201ENST00000378060 REG3GQ6UW15 175 aa5.85□□□□□ -1.47
VPS36-201ENST00000378060 OXLD1Q5BKU9 147 aa5.85□□□□□ -1.47
VPS36-201ENST00000378060 LYPD5Q6UWN5 251 aa5.85□□□□□ -1.47
VPS36-201ENST00000378060 SOSTDC1Q6X4U4 206 aa5.85□□□□□ -1.47
VPS36-201ENST00000378060 C7orf33Q8WU49 177 aa5.85□□□□□ -1.47
VPS36-201ENST00000378060 ATRQ13535 2644 aa5.84□□□□□ -1.47
VPS36-201ENST00000378060 Q6ZTC4 211 aa5.84□□□□□ -1.47
VPS36-201ENST00000378060 A0A1B0GW54 56 aa5.83□□□□□ -1.48
VPS36-201ENST00000378060 FSHBP01225 129 aa5.83□□□□□ -1.48
VPS36-201ENST00000378060 SPINK6Q6UWN8 80 aa5.83□□□□□ -1.48
VPS36-201ENST00000378060 VWFP04275 2813 aa5.83□□□□□ -1.48
VPS36-201ENST00000378060 FAM218AQ96MZ4 157 aa5.83□□□□□ -1.48
VPS36-201ENST00000378060 A8MTW9 85 aa5.82□□□□□ -1.48
VPS36-201ENST00000378060 TRRAPQ9Y4A5 3859 aa5.82□□□□□ -1.48
VPS36-201ENST00000378060 TRBV7-6A0A0J9YX20 115 aa5.82□□□□□ -1.48
VPS36-201ENST00000378060 K7ERS5 55 aa5.82□□□□□ -1.48
VPS36-201ENST00000378060 FHL3Q13643 280 aa5.82□□□□□ -1.48
VPS36-201ENST00000378060 Q6ZRU5 148 aa5.82□□□□□ -1.48
VPS36-201ENST00000378060 LITAFQ99732 161 aa5.82□□□□□ -1.48
VPS36-201ENST00000378060 SPATA3Q8NHX4 192 aa5.81□□□□□ -1.48
VPS36-201ENST00000378060 Q9UF83 564 aa5.81□□□□□ -1.48
VPS36-201ENST00000378060 IGLV9-49A0A0B4J1Y8 123 aa5.81□□□□□ -1.48
VPS36-201ENST00000378060 A0A087WSZ3 146 aa5.8□□□□□ -1.48
VPS36-201ENST00000378060 hDV103S1A0JD37 113 aa5.8□□□□□ -1.48
VPS36-201ENST00000378060 ESRGQ1W209 222 aa5.8□□□□□ -1.48
VPS36-201ENST00000378060 Q9BRP9 147 aa5.79□□□□□ -1.48
VPS36-201ENST00000378060 RETNQ9HD89 108 aa5.79□□□□□ -1.48
VPS36-201ENST00000378060 LOC110117498A0A087WWA1 95 aa5.79□□□□□ -1.48
VPS36-201ENST00000378060 HCG22E2RYF7 251 aa5.79□□□□□ -1.48
VPS36-201ENST00000378060 LRCOL1A6NCL2 159 aa5.79□□□□□ -1.48
VPS36-201ENST00000378060 PMAIP1Q13794 54 aa5.78□□□□□ -1.48
VPS36-201ENST00000378060 STAB1Q9NY15 2570 aa5.78□□□□□ -1.48
VPS36-201ENST00000378060 LINC01556Q5JQF7 62 aa5.77□□□□□ -1.49
VPS36-201ENST00000378060 Q6ZQT0 140 aa5.77□□□□□ -1.49
VPS36-201ENST00000378060 PKD1L1Q8TDX9 2849 aa5.77□□□□□ -1.49
VPS36-201ENST00000378060 H0Y9P7 68 aa5.77□□□□□ -1.49
VPS36-201ENST00000378060 H3BNG1 76 aa5.77□□□□□ -1.49
VPS36-201ENST00000378060 PRO0628Q9UI54 55 aa5.77□□□□□ -1.49
VPS36-201ENST00000378060 COL6A5A8TX70 2615 aa5.77□□□□□ -1.49
VPS36-201ENST00000378060 C6orf48Q9UBA6 75 aa5.77□□□□□ -1.49
VPS36-201ENST00000378060 ELOF1P60002 83 aaKnown RBP5.76□□□□□ -1.49
VPS36-201ENST00000378060 KIAA0087Q14695 138 aa5.76□□□□□ -1.49
VPS36-201ENST00000378060 C22orf24Q9Y442 160 aa5.76□□□□□ -1.49
VPS36-201ENST00000378060 NUPR2A6NF83 97 aa5.75□□□□□ -1.49
VPS36-201ENST00000378060 X6R8D5 127 aa5.75□□□□□ -1.49
VPS36-201ENST00000378060 M0R2N4 97 aa5.75□□□□□ -1.49
VPS36-201ENST00000378060 MGAM2Q2M2H8 2515 aa5.74□□□□□ -1.49
VPS36-201ENST00000378060 GVQW2A0A096LPI5 108 aaPredicted RBP5.74□□□□□ -1.49
VPS36-201ENST00000378060 SMCR5Q8TEV8 140 aa5.74□□□□□ -1.49
VPS36-201ENST00000378060 PSPHP1O15172 72 aa5.73□□□□□ -1.49
VPS36-201ENST00000378060 IGHV6-1A0A0B4J1U7 121 aa5.73□□□□□ -1.49
VPS36-201ENST00000378060 LIMD2Q9BT23 127 aa5.73□□□□□ -1.49
VPS36-201ENST00000378060 Q8NBF4 154 aa5.73□□□□□ -1.49
VPS36-201ENST00000378060 SMIM29Q86T20 159 aa5.73□□□□□ -1.49
VPS36-201ENST00000378060 LINC00167Q96N53 147 aa5.72□□□□□ -1.49
VPS36-201ENST00000378060 ANK2Q01484 3957 aa5.72□□□□□ -1.49
VPS36-201ENST00000378060 CMYA5Q8N3K9 4069 aa5.72□□□□□ -1.49
VPS36-201ENST00000378060 C1orf64Q8NEQ6 169 aa5.72□□□□□ -1.49
VPS36-201ENST00000378060 H3BPC8 53 aa5.71□□□□□ -1.49
VPS36-201ENST00000378060 PRLHP81277 87 aa5.71□□□□□ -1.49
VPS36-201ENST00000378060 PCOTHQ58A44 107 aa5.71□□□□□ -1.49
VPS36-201ENST00000378060 DEFB116Q30KQ4 102 aa5.71□□□□□ -1.5
VPS36-201ENST00000378060 TP53AIP1Q9HCN2 124 aa5.71□□□□□ -1.5
VPS36-201ENST00000378060 IGLV6-57P01721 117 aa5.7□□□□□ -1.5
VPS36-201ENST00000378060 Q6ZRX8 168 aa5.7□□□□□ -1.5
VPS36-201ENST00000378060 CIRBP-AS1Q8TBR5 109 aa5.7□□□□□ -1.5
VPS36-201ENST00000378060 DNHD1Q96M86 4753 aa5.7□□□□□ -1.5
VPS36-201ENST00000378060 ERC2-IT1O76042 136 aa5.69□□□□□ -1.5
VPS36-201ENST00000378060 NHLRC4P0CG21 123 aaPredicted RBP5.69□□□□□ -1.5
VPS36-201ENST00000378060 EIF4EBP3O60516 100 aaPredicted RBP5.68□□□□□ -1.5
VPS36-201ENST00000378060 KRTAP10-3P60369 221 aa5.68□□□□□ -1.5
VPS36-201ENST00000378060 C4orf26Q17RF5 130 aa5.68□□□□□ -1.5
VPS36-201ENST00000378060 TM2D3Q9BRN9 247 aa5.68□□□□□ -1.5
VPS36-201ENST00000378060 LY6G6CO95867 125 aa5.67□□□□□ -1.5
VPS36-201ENST00000378060 KRTAP24-1Q3LI83 254 aa5.67□□□□□ -1.5
VPS36-201ENST00000378060 Q8NAQ8 132 aa5.67□□□□□ -1.5
VPS36-201ENST00000378060 VPREB1P12018 145 aa5.67□□□□□ -1.5
VPS36-201ENST00000378060 IGLV5-52A0A0A0MRZ9 124 aa5.66□□□□□ -1.5
VPS36-201ENST00000378060 TRBV7-4A0A0J9YYF1 115 aa5.66□□□□□ -1.5
VPS36-201ENST00000378060 LINC00476Q8WZB0 136 aa5.66□□□□□ -1.5
VPS36-201ENST00000378060 CSNK1G2-AS1Q8NCQ2 148 aa5.65□□□□□ -1.5
VPS36-201ENST00000378060 LINC01600Q96MT4 127 aa5.64□□□□□ -1.51
VPS36-201ENST00000378060 KLKP1Q107X0 134 aa5.64□□□□□ -1.51
VPS36-201ENST00000378060 TRAV22A0A0B4J277 110 aa5.63□□□□□ -1.51
VPS36-201ENST00000378060 LINC00528Q8N1L1 170 aa5.63□□□□□ -1.51
VPS36-201ENST00000378060 KCNQ1DNQ9H478 68 aa5.62□□□□□ -1.51
VPS36-201ENST00000378060 PRR34Q9NV39 138 aa5.62□□□□□ -1.51
VPS36-201ENST00000378060 C1orf134Q5TEV5 83 aa5.62□□□□□ -1.51
VPS36-201ENST00000378060 Q6ZRP5 223 aa5.62□□□□□ -1.51
VPS36-201ENST00000378060 MDFIQ99750 246 aa5.62□□□□□ -1.51
VPS36-201ENST00000378060 C16orf90A8MZG2 172 aa5.62□□□□□ -1.51
VPS36-201ENST00000378060 DNAH10OSP0CZ25 163 aa5.61□□□□□ -1.51
VPS36-201ENST00000378060 ACYP2P14621 99 aa5.61□□□□□ -1.51
VPS36-201ENST00000378060 LINC00612Q8N6U2 182 aa5.61□□□□□ -1.51
VPS36-201ENST00000378060 NBEAL1Q6ZS30 2694 aa5.61□□□□□ -1.51
VPS36-201ENST00000378060 NOTCH1P46531 2555 aa5.6□□□□□ -1.51
VPS36-201ENST00000378060 ST20-AS1Q8NBB2 130 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 191.9 ms