RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 APLNQ9ULZ1 77 aa8.95□□□□□ -0.98
GPC6-201ENST00000377047 LINC00336Q6ZUF6 198 aa8.94□□□□□ -0.98
GPC6-201ENST00000377047 LINC00612Q8N6U2 182 aa8.94□□□□□ -0.98
GPC6-201ENST00000377047 EPG5Q9HCE0 2579 aa8.94□□□□□ -0.98
GPC6-201ENST00000377047 IGFL1Q6UW32 110 aa8.94□□□□□ -0.98
GPC6-201ENST00000377047 LINC00528Q8N1L1 170 aa8.93□□□□□ -0.98
GPC6-201ENST00000377047 C9orf163Q8N9P6 203 aa8.93□□□□□ -0.98
GPC6-201ENST00000377047 LOC101927531A0A1B0GV80 90 aa8.92□□□□□ -0.98
GPC6-201ENST00000377047 OBSCN-AS1Q96MR7 158 aa8.92□□□□□ -0.98
GPC6-201ENST00000377047 ANAPC11Q9NYG5 84 aa8.92□□□□□ -0.98
GPC6-201ENST00000377047 CASC10Q5T4H9 136 aa8.9□□□□□ -0.98
GPC6-201ENST00000377047 SSBP3-AS1Q7Z2R9 100 aa8.9□□□□□ -0.98
GPC6-201ENST00000377047 IGLV7-43P04211 117 aa8.89□□□□□ -0.99
GPC6-201ENST00000377047 A0A1W2PNN7 141 aa8.88□□□□□ -0.99
GPC6-201ENST00000377047 A0A0G2JQZ4 141 aa8.88□□□□□ -0.99
GPC6-201ENST00000377047 TLX1NBP0CAT3 122 aa8.88□□□□□ -0.99
GPC6-201ENST00000377047 EIF4EBP3O60516 100 aaPredicted RBP8.87□□□□□ -0.99
GPC6-201ENST00000377047 PSORS1C2Q9UIG4 136 aa8.87□□□□□ -0.99
GPC6-201ENST00000377047 ZNF575Q86XF7 245 aa8.86□□□□□ -0.99
GPC6-201ENST00000377047 C8orf17Q9NRJ1 99 aa8.86□□□□□ -0.99
GPC6-201ENST00000377047 Q8N377 158 aa8.86□□□□□ -0.99
GPC6-201ENST00000377047 PLA2G2DQ9UNK4 145 aa8.86□□□□□ -0.99
GPC6-201ENST00000377047 DNAH12Q6ZR08 3092 aa8.85□□□□□ -0.99
GPC6-201ENST00000377047 HECTD1Q9ULT8 2610 aa8.85□□□□□ -0.99
GPC6-201ENST00000377047 A0A1B0GVX0 72 aa8.83□□□□□ -1
GPC6-201ENST00000377047 PRR15Q8IV56 129 aa8.82□□□□□ -1
GPC6-201ENST00000377047 CNBPP62633 177 aaKnown RBP8.82□□□□□ -1
GPC6-201ENST00000377047 UTRNP46939 3433 aa8.8□□□□□ -1
GPC6-201ENST00000377047 SPRR4Q96PI1 79 aa8.79□□□□□ -1
GPC6-201ENST00000377047 FLNBO75369 2602 aaKnown RBP8.79□□□□□ -1
GPC6-201ENST00000377047 TNP2Q05952 138 aa8.77□□□□□ -1
GPC6-201ENST00000377047 COA5Q86WW8 74 aa8.77□□□□□ -1.01
GPC6-201ENST00000377047 IGLV5-37A0A075B6J1 123 aa8.77□□□□□ -1.01
GPC6-201ENST00000377047 ERC2-IT1O76042 136 aa8.77□□□□□ -1.01
GPC6-201ENST00000377047 LINC01600Q96MT4 127 aa8.76□□□□□ -1.01
GPC6-201ENST00000377047 RBM12B-AS1Q9P1G2 102 aa8.75□□□□□ -1.01
GPC6-201ENST00000377047 C4orf26Q17RF5 130 aa8.74□□□□□ -1.01
GPC6-201ENST00000377047 PRO0628Q9UI54 55 aa8.68□□□□□ -1.02
GPC6-201ENST00000377047 MGAM2Q2M2H8 2515 aa8.68□□□□□ -1.02
GPC6-201ENST00000377047 USP24Q9UPU5 2620 aa8.67□□□□□ -1.02
GPC6-201ENST00000377047 PRRC2CQ9Y520 2896 aaKnown RBP8.67□□□□□ -1.02
GPC6-201ENST00000377047 RPS28P62857 69 aaKnown RBP8.66□□□□□ -1.02
GPC6-201ENST00000377047 A0A1W2PNM2 257 aa8.65□□□□□ -1.02
GPC6-201ENST00000377047 UQCR11O14957 56 aa8.65□□□□□ -1.03
GPC6-201ENST00000377047 SPINT4Q6UDR6 99 aa8.64□□□□□ -1.03
GPC6-201ENST00000377047 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.64□□□□□ -1.03
GPC6-201ENST00000377047 A8MUN3 132 aa8.63□□□□□ -1.03
GPC6-201ENST00000377047 LINC01554Q52M75 96 aa8.63□□□□□ -1.03
GPC6-201ENST00000377047 Q8N1X5 172 aa8.62□□□□□ -1.03
GPC6-201ENST00000377047 PRR26Q8N8Z3 221 aa8.62□□□□□ -1.03
GPC6-201ENST00000377047 IGLV5-48A0A075B6I7 105 aa8.6□□□□□ -1.03
GPC6-201ENST00000377047 Q6ZSA8 131 aa8.6□□□□□ -1.03
GPC6-201ENST00000377047 IGLV7-46A0A075B6I9 117 aa8.59□□□□□ -1.03
GPC6-201ENST00000377047 FLNAP21333 2647 aaKnown RBP8.59□□□□□ -1.03
GPC6-201ENST00000377047 MIR22HGQ0VDD5 57 aa8.58□□□□□ -1.04
GPC6-201ENST00000377047 BPTFQ12830 3046 aa8.58□□□□□ -1.04
GPC6-201ENST00000377047 C5orf42Q9H799 3197 aa8.57□□□□□ -1.04
GPC6-201ENST00000377047 WIPF1O43516 503 aa8.56□□□□□ -1.04
GPC6-201ENST00000377047 CYP4F30PQ9H0H9 118 aa8.56□□□□□ -1.04
GPC6-201ENST00000377047 ITPR3Q14573 2671 aa8.56□□□□□ -1.04
GPC6-201ENST00000377047 CEP350Q5VT06 3117 aa8.56□□□□□ -1.04
GPC6-201ENST00000377047 CRIPTQ9P021 101 aa8.55□□□□□ -1.04
GPC6-201ENST00000377047 A0A0D9SG42 100 aa8.55□□□□□ -1.04
GPC6-201ENST00000377047 CR1P17927 2039 aa8.54□□□□□ -1.04
GPC6-201ENST00000377047 HELZ2Q9BYK8 2649 aaKnown RBP8.54□□□□□ -1.04
GPC6-201ENST00000377047 CD164Q04900 197 aa8.53□□□□□ -1.04
GPC6-201ENST00000377047 KLKP1Q107X0 134 aa8.53□□□□□ -1.04
GPC6-201ENST00000377047 FAM104AQ969W3 186 aa8.52□□□□□ -1.04
GPC6-201ENST00000377047 M0R2T5 61 aa8.51□□□□□ -1.05
GPC6-201ENST00000377047 CHD7Q9P2D1 2997 aa8.49□□□□□ -1.05
GPC6-201ENST00000377047 PLAC8Q9NZF1 115 aa8.48□□□□□ -1.05
GPC6-201ENST00000377047 FAM229BQ4G0N7 80 aa8.47□□□□□ -1.05
GPC6-201ENST00000377047 H7BZZ5 65 aa8.45□□□□□ -1.06
GPC6-201ENST00000377047 ATRQ13535 2644 aa8.44□□□□□ -1.06
GPC6-201ENST00000377047 CFAP46Q8IYW2 2715 aa8.43□□□□□ -1.06
GPC6-201ENST00000377047 MAST4O15021 2626 aa8.43□□□□□ -1.06
GPC6-201ENST00000377047 SPANXA2-OT1Q8N9U9 137 aa8.42□□□□□ -1.06
GPC6-201ENST00000377047 Q5VSD8 79 aa8.39□□□□□ -1.07
GPC6-201ENST00000377047 CDC42SE1Q9NRR8 79 aa8.39□□□□□ -1.07
GPC6-201ENST00000377047 LCE6AA0A183 80 aa8.37□□□□□ -1.07
GPC6-201ENST00000377047 KRTAP1-5Q9BYS1 174 aa8.37□□□□□ -1.07
GPC6-201ENST00000377047 Q8NDZ9 215 aa8.34□□□□□ -1.07
GPC6-201ENST00000377047 ZCCHC13Q8WW36 166 aaKnown RBP8.34□□□□□ -1.07
GPC6-201ENST00000377047 HRES1P13985 223 aa8.34□□□□□ -1.08
GPC6-201ENST00000377047 CAMK2N1Q7Z7J9 78 aa8.33□□□□□ -1.08
GPC6-201ENST00000377047 OCR1Q9BZK8 76 aa8.33□□□□□ -1.08
GPC6-201ENST00000377047 KRTAP10-1P60331 282 aa8.32□□□□□ -1.08
GPC6-201ENST00000377047 CHD9Q3L8U1 2897 aa8.31□□□□□ -1.08
GPC6-201ENST00000377047 SPRR1AP35321 89 aa8.31□□□□□ -1.08
GPC6-201ENST00000377047 KRTAP10-2P60368 255 aa8.3□□□□□ -1.08
GPC6-201ENST00000377047 PCNTO95613 3336 aa8.3□□□□□ -1.08
GPC6-201ENST00000377047 S4R3F8 94 aa8.29□□□□□ -1.08
GPC6-201ENST00000377047 MMP24-AS1A0A0U1RRL7 71 aa8.29□□□□□ -1.08
GPC6-201ENST00000377047 CSAG1Q6PB30 78 aa8.26□□□□□ -1.09
GPC6-201ENST00000377047 HTTP42858 3142 aa8.26□□□□□ -1.09
GPC6-201ENST00000377047 A0A1B0GU33 70 aa8.25□□□□□ -1.09
GPC6-201ENST00000377047 SEC61BP60468 96 aaKnown RBP8.25□□□□□ -1.09
GPC6-201ENST00000377047 Q8N9P0 234 aaPredicted RBP8.24□□□□□ -1.09
GPC6-201ENST00000377047 CENPEQ02224 2701 aa8.23□□□□□ -1.09
GPC6-201ENST00000377047 KRTAP26-1Q6PEX3 210 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms