RNA–Protein interactions for RNA: ENST00000376802.2

HLA-A-201, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,334 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-201ENST00000376802 MEIG1Q5JSS6 88 aa9.79□□□□□ -0.84
HLA-A-201ENST00000376802 LINC01545Q5VT33 79 aa9.79□□□□□ -0.84
HLA-A-201ENST00000376802 ERC2-IT1O76042 136 aa9.78□□□□□ -0.84
HLA-A-201ENST00000376802 HERV-K104P63124 156 aa9.78□□□□□ -0.84
HLA-A-201ENST00000376802 B5MCH6 92 aa9.77□□□□□ -0.85
HLA-A-201ENST00000376802 LORP23490 312 aaPredicted RBP9.77□□□□□ -0.85
HLA-A-201ENST00000376802 NDUFA12Q9UI09 145 aa9.77□□□□□ -0.85
HLA-A-201ENST00000376802 SCGB1D1O95968 90 aa9.76□□□□□ -0.85
HLA-A-201ENST00000376802 GAGE2AQ6NT46 116 aa9.76□□□□□ -0.85
HLA-A-201ENST00000376802 LOC107984156A0A0G2JMH3 177 aa9.75□□□□□ -0.85
HLA-A-201ENST00000376802 ARL17AQ8IVW1 177 aa9.75□□□□□ -0.85
HLA-A-201ENST00000376802 Q8N377 158 aa9.75□□□□□ -0.85
HLA-A-201ENST00000376802 MOBPQ13875 183 aa9.74□□□□□ -0.85
HLA-A-201ENST00000376802 Q9BRP9 147 aa9.74□□□□□ -0.85
HLA-A-201ENST00000376802 MYMXA0A1B0GTQ4 84 aa9.73□□□□□ -0.85
HLA-A-201ENST00000376802 LINC00587B1AMM8 73 aa9.73□□□□□ -0.85
HLA-A-201ENST00000376802 H0Y8G0 127 aa9.73□□□□□ -0.85
HLA-A-201ENST00000376802 PLNP26678 52 aa9.73□□□□□ -0.85
HLA-A-201ENST00000376802 TSPEAR-AS2P59090 65 aa9.73□□□□□ -0.85
HLA-A-201ENST00000376802 RPS29P62273 56 aaKnown RBP9.73□□□□□ -0.85
HLA-A-201ENST00000376802 IGLV9-49A0A0B4J1Y8 123 aa9.72□□□□□ -0.85
HLA-A-201ENST00000376802 SSBP3-AS1Q7Z2R9 100 aa9.72□□□□□ -0.85
HLA-A-201ENST00000376802 LINC00518Q8N0U6 118 aa9.72□□□□□ -0.85
HLA-A-201ENST00000376802 DPM2O94777 84 aa9.71□□□□□ -0.86
HLA-A-201ENST00000376802 SEC61BP60468 96 aaKnown RBP9.71□□□□□ -0.86
HLA-A-201ENST00000376802 TRBV10-2A0A0K0K1G8 114 aa9.7□□□□□ -0.86
HLA-A-201ENST00000376802 DDTP30046 118 aa9.7□□□□□ -0.86
HLA-A-201ENST00000376802 Q6ZRX8 168 aa9.7□□□□□ -0.86
HLA-A-201ENST00000376802 C12orf57Q99622 126 aa9.7□□□□□ -0.86
HLA-A-201ENST00000376802 LINC01547P58512 204 aaPredicted RBP9.69□□□□□ -0.86
HLA-A-201ENST00000376802 S100A12P80511 92 aa9.69□□□□□ -0.86
HLA-A-201ENST00000376802 IGKCP01834 107 aa9.68□□□□□ -0.86
HLA-A-201ENST00000376802 PMCHL2Q9BQD1 86 aa9.68□□□□□ -0.86
HLA-A-201ENST00000376802 LEPROTO15243 131 aa9.67□□□□□ -0.86
HLA-A-201ENST00000376802 SLC25A20O43772 301 aa9.67□□□□□ -0.86
HLA-A-201ENST00000376802 XP32Q5T750 250 aa9.67□□□□□ -0.86
HLA-A-201ENST00000376802 IGLV6-57P01721 117 aa9.66□□□□□ -0.86
HLA-A-201ENST00000376802 VAMP8Q9BV40 100 aa9.66□□□□□ -0.86
HLA-A-201ENST00000376802 SPANXB1Q9NS25 103 aaPredicted RBP9.66□□□□□ -0.86
HLA-A-201ENST00000376802 ATOH7Q8N100 152 aa9.65□□□□□ -0.86
HLA-A-201ENST00000376802 HSBP1L1C9JCN9 74 aa9.64□□□□□ -0.87
HLA-A-201ENST00000376802 J3QQQ9 107 aa9.64□□□□□ -0.87
HLA-A-201ENST00000376802 EIF4EBP3O60516 100 aaPredicted RBP9.63□□□□□ -0.87
HLA-A-201ENST00000376802 NDUFC2O95298 119 aa9.63□□□□□ -0.87
HLA-A-201ENST00000376802 S100A7L2Q5SY68 101 aa9.61□□□□□ -0.87
HLA-A-201ENST00000376802 SOSTDC1Q6X4U4 206 aa9.61□□□□□ -0.87
HLA-A-201ENST00000376802 TRAV23DV6A0A075B6W5 121 aa9.6□□□□□ -0.87
HLA-A-201ENST00000376802 NMUP48645 174 aa9.6□□□□□ -0.87
HLA-A-201ENST00000376802 SPATA45Q537H7 98 aa9.6□□□□□ -0.87
HLA-A-201ENST00000376802 ST20-AS1Q8NBB2 130 aa9.6□□□□□ -0.87
HLA-A-201ENST00000376802 PAM16Q9Y3D7 125 aa9.6□□□□□ -0.87
HLA-A-201ENST00000376802 HERVK_113P61574 105 aa9.59□□□□□ -0.87
HLA-A-201ENST00000376802 ADAMTSL4-AS1Q5T5F5 129 aa9.59□□□□□ -0.87
HLA-A-201ENST00000376802 C9orf153Q5TBE3 101 aa9.59□□□□□ -0.87
HLA-A-201ENST00000376802 MIEN1Q9BRT3 115 aa9.59□□□□□ -0.87
HLA-A-201ENST00000376802 ZNF73O43830 326 aaPredicted RBP9.58□□□□□ -0.88
HLA-A-201ENST00000376802 E9PLD3 99 aa9.57□□□□□ -0.88
HLA-A-201ENST00000376802 KRTAP19-2Q3LHN2 52 aa9.57□□□□□ -0.88
HLA-A-201ENST00000376802 ANKRD39Q53RE8 183 aa9.57□□□□□ -0.88
HLA-A-201ENST00000376802 FSIP2Q5CZC0 6907 aa9.57□□□□□ -0.88
HLA-A-201ENST00000376802 LGALS3P17931 250 aaKnown RBP9.56□□□□□ -0.88
HLA-A-201ENST00000376802 NPC2P61916 151 aa9.56□□□□□ -0.88
HLA-A-201ENST00000376802 A0A0J9YXY3 114 aa9.56□□□□□ -0.88
HLA-A-201ENST00000376802 TSTD3H0UI37 97 aa9.56□□□□□ -0.88
HLA-A-201ENST00000376802 COX8AP10176 69 aa9.54□□□□□ -0.88
HLA-A-201ENST00000376802 DLEU1O43261 78 aa9.53□□□□□ -0.88
HLA-A-201ENST00000376802 SPRR1BP22528 89 aa9.53□□□□□ -0.88
HLA-A-201ENST00000376802 UQCR10Q9UDW1 63 aa9.52□□□□□ -0.89
HLA-A-201ENST00000376802 SLC25A34Q6PIV7 304 aa9.51□□□□□ -0.89
HLA-A-201ENST00000376802 C14orf144Q96I85 54 aa9.5□□□□□ -0.89
HLA-A-201ENST00000376802 LITAFQ99732 161 aa9.5□□□□□ -0.89
HLA-A-201ENST00000376802 PRO1933Q9H354 126 aa9.5□□□□□ -0.89
HLA-A-201ENST00000376802 CRCT1Q9UGL9 99 aa9.5□□□□□ -0.89
HLA-A-201ENST00000376802 HINT1P49773 126 aaPredicted RBP9.49□□□□□ -0.89
HLA-A-201ENST00000376802 MT1HP80294 61 aa9.49□□□□□ -0.89
HLA-A-201ENST00000376802 PCOTHQ58A44 107 aa9.49□□□□□ -0.89
HLA-A-201ENST00000376802 HRCT1Q6UXD1 115 aa9.49□□□□□ -0.89
HLA-A-201ENST00000376802 PCP2Q8IVA1 136 aa9.49□□□□□ -0.89
HLA-A-201ENST00000376802 LINC00308Q8TCZ7 52 aa9.48□□□□□ -0.89
HLA-A-201ENST00000376802 LIMD2Q9BT23 127 aa9.47□□□□□ -0.89
HLA-A-201ENST00000376802 C9orf92A6NGG3 77 aa9.46□□□□□ -0.9
HLA-A-201ENST00000376802 SPANXCQ9NY87 97 aa9.46□□□□□ -0.9
HLA-A-201ENST00000376802 DHRS4-AS1Q9P1J3 65 aa9.46□□□□□ -0.9
HLA-A-201ENST00000376802 CBY1Q9Y3M2 126 aa9.46□□□□□ -0.9
HLA-A-201ENST00000376802 IGLV8-61A0A075B6I0 122 aa9.45□□□□□ -0.9
HLA-A-201ENST00000376802 ZNF815PA8K554 130 aa9.45□□□□□ -0.9
HLA-A-201ENST00000376802 OR13C6PQ8NH95 151 aa9.44□□□□□ -0.9
HLA-A-201ENST00000376802 TTTY13Q9BZ97 58 aa9.44□□□□□ -0.9
HLA-A-201ENST00000376802 TIMM17BO60830 172 aa9.43□□□□□ -0.9
HLA-A-201ENST00000376802 HIGD1BQ9P298 99 aa9.43□□□□□ -0.9
HLA-A-201ENST00000376802 LAMTOR3Q9UHA4 124 aa9.43□□□□□ -0.9
HLA-A-201ENST00000376802 ELOF1P60002 83 aaKnown RBP9.42□□□□□ -0.9
HLA-A-201ENST00000376802 C2orf91Q6ZV80 131 aa9.42□□□□□ -0.9
HLA-A-201ENST00000376802 SPANXDQ9BXN6 97 aa9.42□□□□□ -0.9
HLA-A-201ENST00000376802 COX7BP24311 80 aa9.4□□□□□ -0.9
HLA-A-201ENST00000376802 CD164Q04900 197 aa9.4□□□□□ -0.9
HLA-A-201ENST00000376802 SCGB1D4Q6XE38 83 aa9.4□□□□□ -0.9
HLA-A-201ENST00000376802 Q1RN00 199 aa9.39□□□□□ -0.91
HLA-A-201ENST00000376802 C6orf99Q4VX62 202 aa9.39□□□□□ -0.91
HLA-A-201ENST00000376802 PCP4L1A6NKN8 68 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms