RNA–Protein interactions for RNA: ENST00000374990.6

TGFBR1-201, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-201ENST00000374990 KRTAP10-3P60369 221 aa12.94□□□□□ -0.34
TGFBR1-201ENST00000374990 LINC01600Q96MT4 127 aa12.94□□□□□ -0.34
TGFBR1-201ENST00000374990 WDFY4Q6ZS81 3184 aa12.93□□□□□ -0.34
TGFBR1-201ENST00000374990 KRTAP1-1Q07627 177 aa12.92□□□□□ -0.34
TGFBR1-201ENST00000374990 TRAV22A0A0B4J277 110 aa12.92□□□□□ -0.34
TGFBR1-201ENST00000374990 TLX1NBP0CAT3 122 aa12.91□□□□□ -0.34
TGFBR1-201ENST00000374990 CHTF8P0CG12 524 aa12.89□□□□□ -0.35
TGFBR1-201ENST00000374990 PRO0628Q9UI54 55 aa12.89□□□□□ -0.35
TGFBR1-201ENST00000374990 FAM168BA1KXE4 195 aa12.88□□□□□ -0.35
TGFBR1-201ENST00000374990 PLA2G2DQ9UNK4 145 aa12.88□□□□□ -0.35
TGFBR1-201ENST00000374990 BRCA2P51587 3418 aa12.88□□□□□ -0.35
TGFBR1-201ENST00000374990 KRTAP10-11P60412 298 aa12.88□□□□□ -0.35
TGFBR1-201ENST00000374990 RTL8CO15255 209 aa12.88□□□□□ -0.35
TGFBR1-201ENST00000374990 MAP1AP78559 2803 aaPredicted RBP12.86□□□□□ -0.35
TGFBR1-201ENST00000374990 K7EIL1 84 aa12.85□□□□□ -0.35
TGFBR1-201ENST00000374990 KLKP1Q107X0 134 aa12.84□□□□□ -0.35
TGFBR1-201ENST00000374990 Q8N377 158 aa12.84□□□□□ -0.35
TGFBR1-201ENST00000374990 C9orf129Q5T035 196 aaKnown RBP12.84□□□□□ -0.35
TGFBR1-201ENST00000374990 PRUNE2Q8WUY3 3088 aa12.83□□□□□ -0.36
TGFBR1-201ENST00000374990 A8MWP4 228 aa12.83□□□□□ -0.36
TGFBR1-201ENST00000374990 RETNLBQ9BQ08 111 aa12.82□□□□□ -0.36
TGFBR1-201ENST00000374990 FAM104AQ969W3 186 aa12.81□□□□□ -0.36
TGFBR1-201ENST00000374990 DSPP15924 2871 aaKnown RBP12.81□□□□□ -0.36
TGFBR1-201ENST00000374990 K7EQZ3 153 aa12.81□□□□□ -0.36
TGFBR1-201ENST00000374990 TRIOO75962 3097 aa12.79□□□□□ -0.36
TGFBR1-201ENST00000374990 IGKV2D-30A0A075B6S6 120 aa12.78□□□□□ -0.36
TGFBR1-201ENST00000374990 IGKV2-30P06310 120 aa12.78□□□□□ -0.36
TGFBR1-201ENST00000374990 ACYP2P14621 99 aa12.78□□□□□ -0.36
TGFBR1-201ENST00000374990 STAB1Q9NY15 2570 aa12.78□□□□□ -0.36
TGFBR1-201ENST00000374990 SPACA4Q8TDM5 124 aa12.78□□□□□ -0.36
TGFBR1-201ENST00000374990 IGFL1Q6UW32 110 aa12.77□□□□□ -0.36
TGFBR1-201ENST00000374990 C9orf163Q8N9P6 203 aa12.77□□□□□ -0.36
TGFBR1-201ENST00000374990 RPL37AP61513 92 aaKnown RBP12.77□□□□□ -0.37
TGFBR1-201ENST00000374990 TEP1Q99973 2627 aaKnown RBP12.77□□□□□ -0.37
TGFBR1-201ENST00000374990 OBSCN-AS1Q96MR7 158 aa12.76□□□□□ -0.37
TGFBR1-201ENST00000374990 C4orf26Q17RF5 130 aa12.76□□□□□ -0.37
TGFBR1-201ENST00000374990 TEX15Q9BXT5 2789 aa12.76□□□□□ -0.37
TGFBR1-201ENST00000374990 SPINK1P00995 79 aa12.74□□□□□ -0.37
TGFBR1-201ENST00000374990 VPS13AQ96RL7 3174 aa12.73□□□□□ -0.37
TGFBR1-201ENST00000374990 PRR15Q8IV56 129 aa12.72□□□□□ -0.37
TGFBR1-201ENST00000374990 LOC101927531A0A1B0GV80 90 aa12.71□□□□□ -0.37
TGFBR1-201ENST00000374990 UNC80Q8N2C7 3258 aa12.71□□□□□ -0.37
TGFBR1-201ENST00000374990 LINC00313P59037 77 aa12.71□□□□□ -0.37
TGFBR1-201ENST00000374990 UNC79Q9P2D8 2635 aa12.71□□□□□ -0.37
TGFBR1-201ENST00000374990 GCN1Q92616 2671 aaKnown RBP12.71□□□□□ -0.38
TGFBR1-201ENST00000374990 C8orf87E5RJ46 101 aa12.71□□□□□ -0.38
TGFBR1-201ENST00000374990 COL6A5A8TX70 2615 aa12.69□□□□□ -0.38
TGFBR1-201ENST00000374990 MRPL34Q9BQ48 92 aaKnown RBP12.69□□□□□ -0.38
TGFBR1-201ENST00000374990 NOTCH1P46531 2555 aa12.68□□□□□ -0.38
TGFBR1-201ENST00000374990 FAM229AH3BQW9 127 aa12.67□□□□□ -0.38
TGFBR1-201ENST00000374990 CNBPP62633 177 aaKnown RBP12.67□□□□□ -0.38
TGFBR1-201ENST00000374990 IGLV5-48A0A075B6I7 105 aa12.67□□□□□ -0.38
TGFBR1-201ENST00000374990 WIPF1O43516 503 aa12.67□□□□□ -0.38
TGFBR1-201ENST00000374990 IGLV5-37A0A075B6J1 123 aa12.66□□□□□ -0.38
TGFBR1-201ENST00000374990 A0A1B0GU69 56 aa12.66□□□□□ -0.38
TGFBR1-201ENST00000374990 H7BZZ5 65 aa12.66□□□□□ -0.38
TGFBR1-201ENST00000374990 WWC2-AS2Q96NR7 200 aa12.66□□□□□ -0.38
TGFBR1-201ENST00000374990 SSBP3-AS1Q7Z2R9 100 aa12.65□□□□□ -0.38
TGFBR1-201ENST00000374990 A0A1W2PNM2 257 aa12.65□□□□□ -0.39
TGFBR1-201ENST00000374990 TYMSOSQ8TAI1 123 aa12.64□□□□□ -0.39
TGFBR1-201ENST00000374990 ZNF861PO60384 105 aa12.64□□□□□ -0.39
TGFBR1-201ENST00000374990 IGSF10Q6WRI0 2623 aa12.64□□□□□ -0.39
TGFBR1-201ENST00000374990 SPAG11AQ6PDA7 123 aa12.63□□□□□ -0.39
TGFBR1-201ENST00000374990 C7orf65Q6ZTY9 151 aa12.63□□□□□ -0.39
TGFBR1-201ENST00000374990 A0A087WTM6 91 aa12.61□□□□□ -0.39
TGFBR1-201ENST00000374990 NBEAL1Q6ZS30 2694 aa12.6□□□□□ -0.39
TGFBR1-201ENST00000374990 C8orf17Q9NRJ1 99 aa12.6□□□□□ -0.39
TGFBR1-201ENST00000374990 CASC10Q5T4H9 136 aa12.59□□□□□ -0.39
TGFBR1-201ENST00000374990 A0A1W2PNN7 141 aa12.58□□□□□ -0.4
TGFBR1-201ENST00000374990 XIRP2A4UGR9 3374 aa12.58□□□□□ -0.4
TGFBR1-201ENST00000374990 CR1P17927 2039 aa12.58□□□□□ -0.4
TGFBR1-201ENST00000374990 FRYQ5TBA9 3013 aa12.57□□□□□ -0.4
TGFBR1-201ENST00000374990 UBR5O95071 2799 aaPredicted RBP12.56□□□□□ -0.4
TGFBR1-201ENST00000374990 APLNQ9ULZ1 77 aa12.55□□□□□ -0.4
TGFBR1-201ENST00000374990 A0A1B0GVX0 72 aa12.55□□□□□ -0.4
TGFBR1-201ENST00000374990 SETXQ7Z333 2677 aaKnown RBP12.55□□□□□ -0.4
TGFBR1-201ENST00000374990 CYP4F30PQ9H0H9 118 aa12.53□□□□□ -0.4
TGFBR1-201ENST00000374990 PLA2G1BP04054 148 aaKnown RBP12.51□□□□□ -0.41
TGFBR1-201ENST00000374990 COA5Q86WW8 74 aa12.51□□□□□ -0.41
TGFBR1-201ENST00000374990 A0A0G2JQZ4 141 aa12.51□□□□□ -0.41
TGFBR1-201ENST00000374990 SPRR4Q96PI1 79 aa12.49□□□□□ -0.41
TGFBR1-201ENST00000374990 FLNCQ14315 2725 aa12.48□□□□□ -0.41
TGFBR1-201ENST00000374990 A8MUN3 132 aa12.47□□□□□ -0.41
TGFBR1-201ENST00000374990 PSORS1C2Q9UIG4 136 aa12.46□□□□□ -0.42
TGFBR1-201ENST00000374990 Q96NJ1 140 aa12.45□□□□□ -0.42
TGFBR1-201ENST00000374990 NBEAL2Q6ZNJ1 2754 aa12.45□□□□□ -0.42
TGFBR1-201ENST00000374990 OCR1Q9BZK8 76 aa12.43□□□□□ -0.42
TGFBR1-201ENST00000374990 IGLV7-43P04211 117 aa12.42□□□□□ -0.42
TGFBR1-201ENST00000374990 SPANXA2-OT1Q8N9U9 137 aa12.41□□□□□ -0.42
TGFBR1-201ENST00000374990 ATP11AUNQ6ZP68 121 aa12.4□□□□□ -0.42
TGFBR1-201ENST00000374990 DSCR10P59022 87 aa12.36□□□□□ -0.43
TGFBR1-201ENST00000374990 SPRR1AP35321 89 aa12.36□□□□□ -0.43
TGFBR1-201ENST00000374990 Q8NDZ9 215 aa12.36□□□□□ -0.43
TGFBR1-201ENST00000374990 NBEAQ8NFP9 2946 aa12.36□□□□□ -0.43
TGFBR1-201ENST00000374990 CDH23Q9H251 3354 aa12.35□□□□□ -0.43
TGFBR1-201ENST00000374990 LINC00336Q6ZUF6 198 aa12.33□□□□□ -0.44
TGFBR1-201ENST00000374990 ANAPC11Q9NYG5 84 aa12.33□□□□□ -0.44
TGFBR1-201ENST00000374990 LINC00304Q8N9R0 145 aa12.32□□□□□ -0.44
TGFBR1-201ENST00000374990 UQCR11O14957 56 aa12.31□□□□□ -0.44
TGFBR1-201ENST00000374990 ITPR1Q14643 2758 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms