RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 NBEAL2Q6ZNJ1 2754 aa13.6□□□□□ -0.23
TMEFF1-201ENST00000374879 NOTCH2Q04721 2471 aa13.6□□□□□ -0.23
TMEFF1-201ENST00000374879 A8MUN3 132 aa13.59□□□□□ -0.23
TMEFF1-201ENST00000374879 PRB2P02812 416 aaPredicted RBP13.59□□□□□ -0.23
TMEFF1-201ENST00000374879 VPREB1P12018 145 aa13.57□□□□□ -0.24
TMEFF1-201ENST00000374879 CD164Q04900 197 aa13.57□□□□□ -0.24
TMEFF1-201ENST00000374879 HELZ2Q9BYK8 2649 aaKnown RBP13.57□□□□□ -0.24
TMEFF1-201ENST00000374879 GVQW2A0A096LPI5 108 aaPredicted RBP13.57□□□□□ -0.24
TMEFF1-201ENST00000374879 PSCAO43653 123 aa13.56□□□□□ -0.24
TMEFF1-201ENST00000374879 DEFB105AQ8NG35 78 aa13.56□□□□□ -0.24
TMEFF1-201ENST00000374879 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.56□□□□□ -0.24
TMEFF1-201ENST00000374879 SYCNQ0VAF6 134 aa13.54□□□□□ -0.24
TMEFF1-201ENST00000374879 RETNQ9HD89 108 aa13.54□□□□□ -0.24
TMEFF1-201ENST00000374879 CYP4F30PQ9H0H9 118 aa13.53□□□□□ -0.24
TMEFF1-201ENST00000374879 ETDCA0A1B0GVM5 59 aa13.53□□□□□ -0.24
TMEFF1-201ENST00000374879 KRTAP10-3P60369 221 aa13.53□□□□□ -0.24
TMEFF1-201ENST00000374879 ST20-AS1Q8NBB2 130 aa13.52□□□□□ -0.24
TMEFF1-201ENST00000374879 KPRPQ5T749 579 aaPredicted RBP13.52□□□□□ -0.25
TMEFF1-201ENST00000374879 M0R378 163 aa13.51□□□□□ -0.25
TMEFF1-201ENST00000374879 SMR3AQ99954 134 aa13.5□□□□□ -0.25
TMEFF1-201ENST00000374879 Q8N377 158 aa13.5□□□□□ -0.25
TMEFF1-201ENST00000374879 X6R8D5 127 aa13.49□□□□□ -0.25
TMEFF1-201ENST00000374879 GCN1Q92616 2671 aaKnown RBP13.49□□□□□ -0.25
TMEFF1-201ENST00000374879 VWFP04275 2813 aa13.49□□□□□ -0.25
TMEFF1-201ENST00000374879 Q5VV11 94 aa13.48□□□□□ -0.25
TMEFF1-201ENST00000374879 FASNP49327 2511 aaKnown RBP13.48□□□□□ -0.25
TMEFF1-201ENST00000374879 A0A1W2PNM2 257 aa13.48□□□□□ -0.25
TMEFF1-201ENST00000374879 IGLV5-48A0A075B6I7 105 aa13.47□□□□□ -0.25
TMEFF1-201ENST00000374879 HIVEP2P31629 2446 aa13.47□□□□□ -0.25
TMEFF1-201ENST00000374879 DSCR10P59022 87 aa13.46□□□□□ -0.25
TMEFF1-201ENST00000374879 HECTD1Q9ULT8 2610 aa13.46□□□□□ -0.25
TMEFF1-201ENST00000374879 K7EQZ3 153 aa13.45□□□□□ -0.26
TMEFF1-201ENST00000374879 DEFB4AO15263 64 aa13.45□□□□□ -0.26
TMEFF1-201ENST00000374879 PRR34Q9NV39 138 aa13.43□□□□□ -0.26
TMEFF1-201ENST00000374879 CAMK2N2Q96S95 79 aa13.42□□□□□ -0.26
TMEFF1-201ENST00000374879 UNC79Q9P2D8 2635 aa13.42□□□□□ -0.26
TMEFF1-201ENST00000374879 UBE2BP63146 152 aa13.41□□□□□ -0.26
TMEFF1-201ENST00000374879 LINC00588Q9Y4M8 146 aa13.4□□□□□ -0.26
TMEFF1-201ENST00000374879 DEFB135Q30KP9 77 aa13.39□□□□□ -0.27
TMEFF1-201ENST00000374879 MRPL55Q7Z7F7 128 aaKnown RBP13.39□□□□□ -0.27
TMEFF1-201ENST00000374879 C16orf90A8MZG2 172 aa13.38□□□□□ -0.27
TMEFF1-201ENST00000374879 CHKB-CPT1BH3BT56 60 aa13.38□□□□□ -0.27
TMEFF1-201ENST00000374879 J3QKU1 62 aa13.38□□□□□ -0.27
TMEFF1-201ENST00000374879 LYRM9A8MSI8 78 aa13.38□□□□□ -0.27
TMEFF1-201ENST00000374879 C1orf137Q5JT78 98 aa13.38□□□□□ -0.27
TMEFF1-201ENST00000374879 OTOGQ6ZRI0 2925 aa13.37□□□□□ -0.27
TMEFF1-201ENST00000374879 TRRAPQ9Y4A5 3859 aa13.37□□□□□ -0.27
TMEFF1-201ENST00000374879 A0A1B0GW54 56 aa13.36□□□□□ -0.27
TMEFF1-201ENST00000374879 KTN1-AS1Q86SY8 53 aa13.36□□□□□ -0.27
TMEFF1-201ENST00000374879 LELP1Q5T871 98 aa13.36□□□□□ -0.27
TMEFF1-201ENST00000374879 B9D2Q9BPU9 175 aa13.36□□□□□ -0.27
TMEFF1-201ENST00000374879 HCG22E2RYF7 251 aa13.35□□□□□ -0.27
TMEFF1-201ENST00000374879 NDUFB1O75438 58 aa13.35□□□□□ -0.27
TMEFF1-201ENST00000374879 EGFEM1PQ0D2K5 195 aa13.35□□□□□ -0.27
TMEFF1-201ENST00000374879 Q8NBF4 154 aa13.35□□□□□ -0.27
TMEFF1-201ENST00000374879 RBM12B-AS1Q9P1G2 102 aa13.35□□□□□ -0.27
TMEFF1-201ENST00000374879 UBE2AP49459 152 aa13.34□□□□□ -0.27
TMEFF1-201ENST00000374879 Q8N9P0 234 aaPredicted RBP13.34□□□□□ -0.27
TMEFF1-201ENST00000374879 DEFB116Q30KQ4 102 aa13.33□□□□□ -0.28
TMEFF1-201ENST00000374879 SPTSSBQ8NFR3 76 aa13.33□□□□□ -0.28
TMEFF1-201ENST00000374879 TENM1Q9UKZ4 2725 aa13.32□□□□□ -0.28
TMEFF1-201ENST00000374879 TNP2Q05952 138 aa13.32□□□□□ -0.28
TMEFF1-201ENST00000374879 KCNQ1DNQ9H478 68 aa13.31□□□□□ -0.28
TMEFF1-201ENST00000374879 HTN3P15516 51 aa13.3□□□□□ -0.28
TMEFF1-201ENST00000374879 SPRR4Q96PI1 79 aa13.3□□□□□ -0.28
TMEFF1-201ENST00000374879 PRR15LQ9BU68 103 aa13.3□□□□□ -0.28
TMEFF1-201ENST00000374879 APOC4P55056 127 aa13.29□□□□□ -0.28
TMEFF1-201ENST00000374879 LINC00208Q96KT6 92 aa13.28□□□□□ -0.28
TMEFF1-201ENST00000374879 LIMD2Q9BT23 127 aa13.27□□□□□ -0.28
TMEFF1-201ENST00000374879 MP68P56378 58 aa13.27□□□□□ -0.29
TMEFF1-201ENST00000374879 LCA10Q71F78 164 aa13.27□□□□□ -0.29
TMEFF1-201ENST00000374879 WFDC13Q8IUB5 93 aa13.27□□□□□ -0.29
TMEFF1-201ENST00000374879 Q9BRP9 147 aa13.26□□□□□ -0.29
TMEFF1-201ENST00000374879 C7orf33Q8WU49 177 aa13.26□□□□□ -0.29
TMEFF1-201ENST00000374879 INAFM1C9JVW0 142 aa13.25□□□□□ -0.29
TMEFF1-201ENST00000374879 SERTAD4-AS1Q5TG53 156 aa13.25□□□□□ -0.29
TMEFF1-201ENST00000374879 NKAPP1Q8N9T2 125 aa13.25□□□□□ -0.29
TMEFF1-201ENST00000374879 Q8NAQ8 132 aa13.25□□□□□ -0.29
TMEFF1-201ENST00000374879 C15orf56Q8N910 161 aa13.24□□□□□ -0.29
TMEFF1-201ENST00000374879 DHRS4-AS1Q9P1J3 65 aa13.23□□□□□ -0.29
TMEFF1-201ENST00000374879 Q6ZRX8 168 aa13.22□□□□□ -0.29
TMEFF1-201ENST00000374879 KRTAP26-1Q6PEX3 210 aa13.22□□□□□ -0.29
TMEFF1-201ENST00000374879 RPL37AP8A6NKH3 93 aa13.21□□□□□ -0.29
TMEFF1-201ENST00000374879 ATP11AUNQ6ZP68 121 aa13.21□□□□□ -0.29
TMEFF1-201ENST00000374879 WFDC10BQ8IUB3 73 aa13.21□□□□□ -0.3
TMEFF1-201ENST00000374879 A0A0G2JQZ4 141 aa13.2□□□□□ -0.3
TMEFF1-201ENST00000374879 A0A1W2PNN7 141 aa13.2□□□□□ -0.3
TMEFF1-201ENST00000374879 SPART-AS1P0CW21 52 aa13.2□□□□□ -0.3
TMEFF1-201ENST00000374879 ATRQ13535 2644 aa13.19□□□□□ -0.3
TMEFF1-201ENST00000374879 SPANXA2-OT1Q8N9U9 137 aa13.18□□□□□ -0.3
TMEFF1-201ENST00000374879 A6NED7 52 aa13.18□□□□□ -0.3
TMEFF1-201ENST00000374879 A6NN06 94 aa13.17□□□□□ -0.3
TMEFF1-201ENST00000374879 KRTAP4-16G5E9R7 235 aaPredicted RBP13.16□□□□□ -0.3
TMEFF1-201ENST00000374879 Q75L30 129 aa13.16□□□□□ -0.3
TMEFF1-201ENST00000374879 NSD1Q96L73 2696 aaPredicted RBP13.16□□□□□ -0.3
TMEFF1-201ENST00000374879 KMT2BQ9UMN6 2715 aaPredicted RBP13.15□□□□□ -0.3
TMEFF1-201ENST00000374879 H0Y9P7 68 aa13.14□□□□□ -0.31
TMEFF1-201ENST00000374879 NDUFS5O43920 106 aa13.14□□□□□ -0.31
TMEFF1-201ENST00000374879 IGKV2D-24A0A075B6R9 120 aa13.13□□□□□ -0.31
TMEFF1-201ENST00000374879 PHF5AQ7RTV0 110 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms