RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 BPY2O14599 106 aa7.36□□□□□ -1.23
CCDC40-203ENST00000374877 DNAH3Q8TD57 4116 aa7.36□□□□□ -1.23
CCDC40-203ENST00000374877 EPM2AB3EWF7 344 aa7.36□□□□□ -1.23
CCDC40-203ENST00000374877 VPREB1P12018 145 aa7.36□□□□□ -1.23
CCDC40-203ENST00000374877 Q8NAQ8 132 aa7.35□□□□□ -1.23
CCDC40-203ENST00000374877 TRBV7-6A0A0J9YX20 115 aa7.34□□□□□ -1.23
CCDC40-203ENST00000374877 M0R378 163 aa7.34□□□□□ -1.23
CCDC40-203ENST00000374877 TMEM254Q8TBM7 123 aa7.34□□□□□ -1.23
CCDC40-203ENST00000374877 SMIM26A0A096LP01 95 aa7.34□□□□□ -1.24
CCDC40-203ENST00000374877 NDUFC1O43677 76 aa7.34□□□□□ -1.24
CCDC40-203ENST00000374877 Q6ZRU5 148 aa7.34□□□□□ -1.24
CCDC40-203ENST00000374877 C3orf84H3BNL1 204 aa7.33□□□□□ -1.24
CCDC40-203ENST00000374877 LINC00336Q6ZUF6 198 aa7.33□□□□□ -1.24
CCDC40-203ENST00000374877 FP248Q71RG6 208 aaPredicted RBP7.32□□□□□ -1.24
CCDC40-203ENST00000374877 WFDC10BQ8IUB3 73 aa7.32□□□□□ -1.24
CCDC40-203ENST00000374877 LINC00528Q8N1L1 170 aa7.32□□□□□ -1.24
CCDC40-203ENST00000374877 DEFB105AQ8NG35 78 aa7.32□□□□□ -1.24
CCDC40-203ENST00000374877 K7EIL1 84 aa7.32□□□□□ -1.24
CCDC40-203ENST00000374877 LINC00474Q9P2X8 69 aa7.32□□□□□ -1.24
CCDC40-203ENST00000374877 IGKV4-1P06312 121 aa7.3□□□□□ -1.24
CCDC40-203ENST00000374877 MRAPQ8TCY5 172 aa7.29□□□□□ -1.24
CCDC40-203ENST00000374877 ATP5EP56381 51 aaPredicted RBP7.28□□□□□ -1.24
CCDC40-203ENST00000374877 RETNQ9HD89 108 aa7.28□□□□□ -1.24
CCDC40-203ENST00000374877 Q6ZRP5 223 aa7.28□□□□□ -1.24
CCDC40-203ENST00000374877 C15orf56Q8N910 161 aa7.27□□□□□ -1.25
CCDC40-203ENST00000374877 PRYO14603 147 aa7.27□□□□□ -1.25
CCDC40-203ENST00000374877 PRO0628Q9UI54 55 aa7.27□□□□□ -1.25
CCDC40-203ENST00000374877 PRB2P02812 416 aaPredicted RBP7.26□□□□□ -1.25
CCDC40-203ENST00000374877 NKAPP1Q8N9T2 125 aa7.26□□□□□ -1.25
CCDC40-203ENST00000374877 OCR1Q9BZK8 76 aa7.26□□□□□ -1.25
CCDC40-203ENST00000374877 ERC2-IT1O76042 136 aa7.26□□□□□ -1.25
CCDC40-203ENST00000374877 MPLKIPQ8TAP9 179 aa7.26□□□□□ -1.25
CCDC40-203ENST00000374877 IGKV2D-24A0A075B6R9 120 aa7.25□□□□□ -1.25
CCDC40-203ENST00000374877 KRTAP26-1Q6PEX3 210 aa7.25□□□□□ -1.25
CCDC40-203ENST00000374877 HIGD2AQ9BW72 106 aa7.25□□□□□ -1.25
CCDC40-203ENST00000374877 C1orf43Q9BWL3 253 aa7.25□□□□□ -1.25
CCDC40-203ENST00000374877 A0A0U1RQV1 116 aa7.24□□□□□ -1.25
CCDC40-203ENST00000374877 FUSP35637 526 aaKnown RBP eCLIP7.24□□□□□ -1.25
CCDC40-203ENST00000374877 Q8N377 158 aa7.24□□□□□ -1.25
CCDC40-203ENST00000374877 FAM229BQ4G0N7 80 aa7.24□□□□□ -1.25
CCDC40-203ENST00000374877 PKD1L1Q8TDX9 2849 aa7.24□□□□□ -1.25
CCDC40-203ENST00000374877 FAM30AQ9NZY2 134 aa7.23□□□□□ -1.25
CCDC40-203ENST00000374877 SYCNQ0VAF6 134 aa7.23□□□□□ -1.25
CCDC40-203ENST00000374877 SERTAD4-AS1Q5TG53 156 aa7.23□□□□□ -1.25
CCDC40-203ENST00000374877 C7orf33Q8WU49 177 aa7.23□□□□□ -1.25
CCDC40-203ENST00000374877 SMIM29Q86T20 159 aa7.22□□□□□ -1.25
CCDC40-203ENST00000374877 BRK1Q8WUW1 75 aa7.22□□□□□ -1.25
CCDC40-203ENST00000374877 B9D2Q9BPU9 175 aa7.22□□□□□ -1.25
CCDC40-203ENST00000374877 RPL37AP8A6NKH3 93 aa7.22□□□□□ -1.25
CCDC40-203ENST00000374877 H3BNG1 76 aa7.21□□□□□ -1.25
CCDC40-203ENST00000374877 Q6ZTC4 211 aa7.21□□□□□ -1.25
CCDC40-203ENST00000374877 KCNQ1DNQ9H478 68 aa7.21□□□□□ -1.25
CCDC40-203ENST00000374877 ESRGQ1W209 222 aa7.21□□□□□ -1.26
CCDC40-203ENST00000374877 PKIGQ9Y2B9 76 aa7.21□□□□□ -1.26
CCDC40-203ENST00000374877 C11orf45Q8TAV5 145 aa7.2□□□□□ -1.26
CCDC40-203ENST00000374877 IGLV5-48A0A075B6I7 105 aa7.2□□□□□ -1.26
CCDC40-203ENST00000374877 A0A1W2PNM2 257 aa7.19□□□□□ -1.26
CCDC40-203ENST00000374877 C1orf137Q5JT78 98 aa7.19□□□□□ -1.26
CCDC40-203ENST00000374877 ST20-AS1Q8NBB2 130 aa7.18□□□□□ -1.26
CCDC40-203ENST00000374877 MGAM2Q2M2H8 2515 aa7.18□□□□□ -1.26
CCDC40-203ENST00000374877 ETDCA0A1B0GVM5 59 aa7.18□□□□□ -1.26
CCDC40-203ENST00000374877 DHRS4-AS1Q9P1J3 65 aa7.17□□□□□ -1.26
CCDC40-203ENST00000374877 Q6ZRX8 168 aa7.17□□□□□ -1.26
CCDC40-203ENST00000374877 FAM168BA1KXE4 195 aa7.17□□□□□ -1.26
CCDC40-203ENST00000374877 Q9BRP9 147 aa7.17□□□□□ -1.26
CCDC40-203ENST00000374877 NOTCH1P46531 2555 aa7.15□□□□□ -1.26
CCDC40-203ENST00000374877 LRCOL1A6NCL2 159 aa7.15□□□□□ -1.26
CCDC40-203ENST00000374877 Q8NBF4 154 aa7.15□□□□□ -1.26
CCDC40-203ENST00000374877 HUWE1Q7Z6Z7 4374 aaKnown RBP7.15□□□□□ -1.27
CCDC40-203ENST00000374877 DEFB131BA0A096LNP1 70 aa7.15□□□□□ -1.27
CCDC40-203ENST00000374877 LINC01556Q5JQF7 62 aa7.15□□□□□ -1.27
CCDC40-203ENST00000374877 NBEAL1Q6ZS30 2694 aa7.14□□□□□ -1.27
CCDC40-203ENST00000374877 K7EQZ3 153 aa7.13□□□□□ -1.27
CCDC40-203ENST00000374877 UBE2BP63146 152 aa7.13□□□□□ -1.27
CCDC40-203ENST00000374877 F8WDY8 70 aa7.13□□□□□ -1.27
CCDC40-203ENST00000374877 DNHD1Q96M86 4753 aa7.12□□□□□ -1.27
CCDC40-203ENST00000374877 IGLV1-50A0A075B6I6 118 aa7.12□□□□□ -1.27
CCDC40-203ENST00000374877 TNP2Q05952 138 aa7.12□□□□□ -1.27
CCDC40-203ENST00000374877 DNAH9Q9NYC9 4486 aa7.12□□□□□ -1.27
CCDC40-203ENST00000374877 DSCR10P59022 87 aa7.12□□□□□ -1.27
CCDC40-203ENST00000374877 A0A1B0GW54 56 aa7.11□□□□□ -1.27
CCDC40-203ENST00000374877 TENM3Q9P273 2699 aa7.11□□□□□ -1.27
CCDC40-203ENST00000374877 KRTAP4-16G5E9R7 235 aaPredicted RBP7.11□□□□□ -1.27
CCDC40-203ENST00000374877 PRR4Q16378 134 aa7.11□□□□□ -1.27
CCDC40-203ENST00000374877 A0A0G2JQZ4 141 aa7.1□□□□□ -1.27
CCDC40-203ENST00000374877 A0A1W2PNN7 141 aa7.1□□□□□ -1.27
CCDC40-203ENST00000374877 hDV103S1A0JD37 113 aa7.09□□□□□ -1.27
CCDC40-203ENST00000374877 CASC10Q5T4H9 136 aa7.09□□□□□ -1.27
CCDC40-203ENST00000374877 SPRR4Q96PI1 79 aa7.09□□□□□ -1.27
CCDC40-203ENST00000374877 DEFB116Q30KQ4 102 aa7.09□□□□□ -1.27
CCDC40-203ENST00000374877 C1orf64Q8NEQ6 169 aa7.09□□□□□ -1.27
CCDC40-203ENST00000374877 TLX1NBP0CAT3 122 aa7.09□□□□□ -1.28
CCDC40-203ENST00000374877 SPRR1AP35321 89 aa7.09□□□□□ -1.28
CCDC40-203ENST00000374877 LCE6AA0A183 80 aa7.08□□□□□ -1.28
CCDC40-203ENST00000374877 MRPL55Q7Z7F7 128 aaKnown RBP7.08□□□□□ -1.28
CCDC40-203ENST00000374877 PLA2G2DQ9UNK4 145 aa7.08□□□□□ -1.28
CCDC40-203ENST00000374877 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.08□□□□□ -1.28
CCDC40-203ENST00000374877 KRTAP7-1Q8IUC3 87 aa7.07□□□□□ -1.28
CCDC40-203ENST00000374877 HCG22E2RYF7 251 aa7.07□□□□□ -1.28
CCDC40-203ENST00000374877 LINC00476Q8WZB0 136 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 226.6 ms