RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 COPS9Q8WXC6 57 aa12.46□□□□□ -0.41
MAP1LC3A-202ENST00000374837 TRAV23DV6A0A075B6W5 121 aa12.45□□□□□ -0.42
MAP1LC3A-202ENST00000374837 B5MCH6 92 aa12.45□□□□□ -0.42
MAP1LC3A-202ENST00000374837 RPL13AP40429 203 aaKnown RBP12.45□□□□□ -0.42
MAP1LC3A-202ENST00000374837 LINC00518Q8N0U6 118 aa12.45□□□□□ -0.42
MAP1LC3A-202ENST00000374837 OR13C6PQ8NH95 151 aa12.45□□□□□ -0.42
MAP1LC3A-202ENST00000374837 PPDPFQ9H3Y8 114 aa12.45□□□□□ -0.42
MAP1LC3A-202ENST00000374837 A0A087X002 238 aa12.44□□□□□ -0.42
MAP1LC3A-202ENST00000374837 CRYGAP11844 174 aa12.43□□□□□ -0.42
MAP1LC3A-202ENST00000374837 JOSD1Q15040 202 aaPredicted RBP12.43□□□□□ -0.42
MAP1LC3A-202ENST00000374837 SMCR5Q8TEV8 140 aa12.43□□□□□ -0.42
MAP1LC3A-202ENST00000374837 TMA7Q9Y2S6 64 aaKnown RBP12.43□□□□□ -0.42
MAP1LC3A-202ENST00000374837 ZNF73O43830 326 aaPredicted RBP12.42□□□□□ -0.42
MAP1LC3A-202ENST00000374837 CBY1Q9Y3M2 126 aa12.41□□□□□ -0.42
MAP1LC3A-202ENST00000374837 COX8AP10176 69 aa12.4□□□□□ -0.42
MAP1LC3A-202ENST00000374837 FAM229BQ4G0N7 80 aa12.4□□□□□ -0.42
MAP1LC3A-202ENST00000374837 Q6ZRX8 168 aa12.39□□□□□ -0.43
MAP1LC3A-202ENST00000374837 SPRR4Q96PI1 79 aa12.39□□□□□ -0.43
MAP1LC3A-202ENST00000374837 KRTAP13-2Q52LG2 175 aa12.38□□□□□ -0.43
MAP1LC3A-202ENST00000374837 Q9BRP9 147 aa12.38□□□□□ -0.43
MAP1LC3A-202ENST00000374837 PAM16Q9Y3D7 125 aa12.38□□□□□ -0.43
MAP1LC3A-202ENST00000374837 RNF213Q63HN8 5207 aa12.38□□□□□ -0.43
MAP1LC3A-202ENST00000374837 ERC2-IT1O76042 136 aa12.37□□□□□ -0.43
MAP1LC3A-202ENST00000374837 SPATA45Q537H7 98 aa12.37□□□□□ -0.43
MAP1LC3A-202ENST00000374837 DLEU1O43261 78 aa12.36□□□□□ -0.43
MAP1LC3A-202ENST00000374837 TYMSOSQ8TAI1 123 aa12.36□□□□□ -0.43
MAP1LC3A-202ENST00000374837 C14orf144Q96I85 54 aa12.36□□□□□ -0.43
MAP1LC3A-202ENST00000374837 VAMP8Q9BV40 100 aa12.36□□□□□ -0.43
MAP1LC3A-202ENST00000374837 ZNF706Q9Y5V0 76 aaPredicted RBP12.36□□□□□ -0.43
MAP1LC3A-202ENST00000374837 HINT1P49773 126 aaPredicted RBP12.35□□□□□ -0.43
MAP1LC3A-202ENST00000374837 A6NDN8 102 aa12.33□□□□□ -0.44
MAP1LC3A-202ENST00000374837 PYY3Q5JQD4 70 aa12.32□□□□□ -0.44
MAP1LC3A-202ENST00000374837 C6orf99Q4VX62 202 aa12.31□□□□□ -0.44
MAP1LC3A-202ENST00000374837 TRAV13-2A0A0B4J235 113 aa12.3□□□□□ -0.44
MAP1LC3A-202ENST00000374837 A4D1N5 150 aa12.3□□□□□ -0.44
MAP1LC3A-202ENST00000374837 C3orf22Q8N5N4 141 aa12.3□□□□□ -0.44
MAP1LC3A-202ENST00000374837 HIST1H4GQ99525 98 aa12.3□□□□□ -0.44
MAP1LC3A-202ENST00000374837 GAGE2AQ6NT46 116 aa12.29□□□□□ -0.44
MAP1LC3A-202ENST00000374837 COX7BP24311 80 aa12.28□□□□□ -0.44
MAP1LC3A-202ENST00000374837 LINC00483Q53H64 154 aa12.28□□□□□ -0.44
MAP1LC3A-202ENST00000374837 SLC25A34Q6PIV7 304 aa12.28□□□□□ -0.44
MAP1LC3A-202ENST00000374837 ELOF1P60002 83 aaKnown RBP12.26□□□□□ -0.45
MAP1LC3A-202ENST00000374837 HIGD1BQ9P298 99 aa12.26□□□□□ -0.45
MAP1LC3A-202ENST00000374837 DHRS4-AS1Q9P1J3 65 aa12.25□□□□□ -0.45
MAP1LC3A-202ENST00000374837 TRBV7-6A0A0J9YX20 115 aa12.24□□□□□ -0.45
MAP1LC3A-202ENST00000374837 TSPAN13O95857 204 aa12.24□□□□□ -0.45
MAP1LC3A-202ENST00000374837 C2orf91Q6ZV80 131 aa12.24□□□□□ -0.45
MAP1LC3A-202ENST00000374837 ST20-AS1Q8NBB2 130 aa12.24□□□□□ -0.45
MAP1LC3A-202ENST00000374837 SMIM11BQ8TCY0 68 aa12.24□□□□□ -0.45
MAP1LC3A-202ENST00000374837 LRP2P98164 4655 aa12.23□□□□□ -0.45
MAP1LC3A-202ENST00000374837 LINC00304Q8N9R0 145 aa12.22□□□□□ -0.45
MAP1LC3A-202ENST00000374837 A0A1B0GWB2 263 aa12.21□□□□□ -0.45
MAP1LC3A-202ENST00000374837 C12orf57Q99622 126 aa12.21□□□□□ -0.45
MAP1LC3A-202ENST00000374837 IGLV9-49A0A0B4J1Y8 123 aa12.15□□□□□ -0.46
MAP1LC3A-202ENST00000374837 CFC1BP0CG36 223 aa12.14□□□□□ -0.47
MAP1LC3A-202ENST00000374837 CFC1P0CG37 223 aa12.14□□□□□ -0.47
MAP1LC3A-202ENST00000374837 SPRR1BP22528 89 aa12.14□□□□□ -0.47
MAP1LC3A-202ENST00000374837 TAL2Q16559 108 aa12.14□□□□□ -0.47
MAP1LC3A-202ENST00000374837 Q8NBF4 154 aa12.14□□□□□ -0.47
MAP1LC3A-202ENST00000374837 MOBPQ13875 183 aa12.13□□□□□ -0.47
MAP1LC3A-202ENST00000374837 CEND1Q8N111 149 aa12.13□□□□□ -0.47
MAP1LC3A-202ENST00000374837 VAMP3Q15836 100 aa12.12□□□□□ -0.47
MAP1LC3A-202ENST00000374837 SPAG11AQ6PDA7 123 aa12.11□□□□□ -0.47
MAP1LC3A-202ENST00000374837 SSBP3-AS1Q7Z2R9 100 aa12.11□□□□□ -0.47
MAP1LC3A-202ENST00000374837 CTAG1AP78358 180 aa12.1□□□□□ -0.47
MAP1LC3A-202ENST00000374837 DEFB105AQ8NG35 78 aa12.1□□□□□ -0.47
MAP1LC3A-202ENST00000374837 PRR4Q16378 134 aa12.09□□□□□ -0.47
MAP1LC3A-202ENST00000374837 C4orf48Q5BLP8 95 aa12.09□□□□□ -0.47
MAP1LC3A-202ENST00000374837 RAB37Q96AX2 223 aa12.09□□□□□ -0.47
MAP1LC3A-202ENST00000374837 A0A0B4J2C4 111 aa12.08□□□□□ -0.48
MAP1LC3A-202ENST00000374837 NHP2Q9NX24 153 aaKnown RBP12.08□□□□□ -0.48
MAP1LC3A-202ENST00000374837 H7C2G1 150 aa12.07□□□□□ -0.48
MAP1LC3A-202ENST00000374837 FXYD2P54710 66 aa12.07□□□□□ -0.48
MAP1LC3A-202ENST00000374837 C9orf153Q5TBE3 101 aa12.07□□□□□ -0.48
MAP1LC3A-202ENST00000374837 LINC00575Q6W349 94 aa12.07□□□□□ -0.48
MAP1LC3A-202ENST00000374837 UQCR10Q9UDW1 63 aa12.07□□□□□ -0.48
MAP1LC3A-202ENST00000374837 TEX49A0A1B0GTD5 131 aa12.06□□□□□ -0.48
MAP1LC3A-202ENST00000374837 LINC01547P58512 204 aaPredicted RBP12.06□□□□□ -0.48
MAP1LC3A-202ENST00000374837 LAMTOR3Q9UHA4 124 aa12.06□□□□□ -0.48
MAP1LC3A-202ENST00000374837 SLC25A20O43772 301 aa12.05□□□□□ -0.48
MAP1LC3A-202ENST00000374837 IGLV5-48A0A075B6I7 105 aa12.04□□□□□ -0.48
MAP1LC3A-202ENST00000374837 TMEM238LA0A1B0GVL6 79 aa12.04□□□□□ -0.48
MAP1LC3A-202ENST00000374837 A6NJY4 79 aa12.04□□□□□ -0.48
MAP1LC3A-202ENST00000374837 HSD52Q0P140 79 aa12.04□□□□□ -0.48
MAP1LC3A-202ENST00000374837 BVES-AS1Q5T3Y7 98 aa12.03□□□□□ -0.48
MAP1LC3A-202ENST00000374837 RETNLBQ9BQ08 111 aa12.03□□□□□ -0.48
MAP1LC3A-202ENST00000374837 hADV29S1A0JD25 119 aa12.02□□□□□ -0.49
MAP1LC3A-202ENST00000374837 SPINK1P00995 79 aa12.02□□□□□ -0.49
MAP1LC3A-202ENST00000374837 Q1RN00 199 aa12.01□□□□□ -0.49
MAP1LC3A-202ENST00000374837 SMIM29Q86T20 159 aa12.01□□□□□ -0.49
MAP1LC3A-202ENST00000374837 Q8N377 158 aa12□□□□□ -0.49
MAP1LC3A-202ENST00000374837 PRO1854Q9UHT4 67 aa12□□□□□ -0.49
MAP1LC3A-202ENST00000374837 Q6ZQY7 126 aa11.97□□□□□ -0.49
MAP1LC3A-202ENST00000374837 PRO1933Q9H354 126 aa11.97□□□□□ -0.49
MAP1LC3A-202ENST00000374837 LPAP08519 4548 aa11.95□□□□□ -0.5
MAP1LC3A-202ENST00000374837 H0YGX0 51 aa11.94□□□□□ -0.5
MAP1LC3A-202ENST00000374837 SMIM6P0DI80 62 aa11.94□□□□□ -0.5
MAP1LC3A-202ENST00000374837 RPS29P62273 56 aaKnown RBP11.94□□□□□ -0.5
MAP1LC3A-202ENST00000374837 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.93□□□□□ -0.5
MAP1LC3A-202ENST00000374837 K7ERJ3 54 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms