RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 LINC00588Q9Y4M8 146 aa11.78□□□□□ -0.52
TRAF3IP1-201ENST00000373327 WFDC13Q8IUB5 93 aa11.77□□□□□ -0.52
TRAF3IP1-201ENST00000373327 CASC10Q5T4H9 136 aa11.77□□□□□ -0.53
TRAF3IP1-201ENST00000373327 H3BQ85 93 aa11.76□□□□□ -0.53
TRAF3IP1-201ENST00000373327 C1orf137Q5JT78 98 aa11.76□□□□□ -0.53
TRAF3IP1-201ENST00000373327 PRR34Q9NV39 138 aa11.76□□□□□ -0.53
TRAF3IP1-201ENST00000373327 SERTAD4-AS1Q5TG53 156 aa11.76□□□□□ -0.53
TRAF3IP1-201ENST00000373327 HRCT1Q6UXD1 115 aa11.76□□□□□ -0.53
TRAF3IP1-201ENST00000373327 ST20-AS1Q8NBB2 130 aa11.76□□□□□ -0.53
TRAF3IP1-201ENST00000373327 C2orf48Q96LS8 159 aa11.76□□□□□ -0.53
TRAF3IP1-201ENST00000373327 C22orf24Q9Y442 160 aa11.76□□□□□ -0.53
TRAF3IP1-201ENST00000373327 VPREB1P12018 145 aa11.75□□□□□ -0.53
TRAF3IP1-201ENST00000373327 FAM30AQ9NZY2 134 aa11.75□□□□□ -0.53
TRAF3IP1-201ENST00000373327 LINC00167Q96N53 147 aa11.74□□□□□ -0.53
TRAF3IP1-201ENST00000373327 H0Y9J4 135 aa11.74□□□□□ -0.53
TRAF3IP1-201ENST00000373327 NDUFS5O43920 106 aa11.74□□□□□ -0.53
TRAF3IP1-201ENST00000373327 Q6ZQT0 140 aa11.74□□□□□ -0.53
TRAF3IP1-201ENST00000373327 C15orf56Q8N910 161 aa11.74□□□□□ -0.53
TRAF3IP1-201ENST00000373327 IGLV6-57P01721 117 aa11.73□□□□□ -0.53
TRAF3IP1-201ENST00000373327 MRPL55Q7Z7F7 128 aaKnown RBP11.73□□□□□ -0.53
TRAF3IP1-201ENST00000373327 CDK2AP2O75956 126 aa11.72□□□□□ -0.53
TRAF3IP1-201ENST00000373327 A0A0G2JQZ4 141 aa11.72□□□□□ -0.53
TRAF3IP1-201ENST00000373327 A0A1W2PNN7 141 aa11.72□□□□□ -0.53
TRAF3IP1-201ENST00000373327 DHRS4-AS1Q9P1J3 65 aa11.72□□□□□ -0.53
TRAF3IP1-201ENST00000373327 PKD1L1Q8TDX9 2849 aa11.71□□□□□ -0.53
TRAF3IP1-201ENST00000373327 FAM236DA0A1B0GTK5 79 aa11.71□□□□□ -0.54
TRAF3IP1-201ENST00000373327 FAM236CP0DP71 79 aa11.71□□□□□ -0.54
TRAF3IP1-201ENST00000373327 C5orf47Q569G3 176 aa11.71□□□□□ -0.54
TRAF3IP1-201ENST00000373327 ELOF1P60002 83 aaKnown RBP11.71□□□□□ -0.54
TRAF3IP1-201ENST00000373327 CHTF8P0CG12 524 aa11.7□□□□□ -0.54
TRAF3IP1-201ENST00000373327 REG3GQ6UW15 175 aa11.68□□□□□ -0.54
TRAF3IP1-201ENST00000373327 MPLKIPQ8TAP9 179 aa11.68□□□□□ -0.54
TRAF3IP1-201ENST00000373327 IGLV9-49A0A0B4J1Y8 123 aa11.68□□□□□ -0.54
TRAF3IP1-201ENST00000373327 LRCOL1A6NCL2 159 aa11.66□□□□□ -0.54
TRAF3IP1-201ENST00000373327 A0A087WSZ3 146 aa11.65□□□□□ -0.55
TRAF3IP1-201ENST00000373327 TMEM258P61165 79 aa11.64□□□□□ -0.55
TRAF3IP1-201ENST00000373327 K7EIL1 84 aa11.63□□□□□ -0.55
TRAF3IP1-201ENST00000373327 B9D2Q9BPU9 175 aa11.63□□□□□ -0.55
TRAF3IP1-201ENST00000373327 TRAV7A0A075B6U4 112 aa11.62□□□□□ -0.55
TRAF3IP1-201ENST00000373327 GVQW2A0A096LPI5 108 aaPredicted RBP11.62□□□□□ -0.55
TRAF3IP1-201ENST00000373327 H3BNG1 76 aa11.62□□□□□ -0.55
TRAF3IP1-201ENST00000373327 BRK1Q8WUW1 75 aa11.62□□□□□ -0.55
TRAF3IP1-201ENST00000373327 TM2D3Q9BRN9 247 aa11.6□□□□□ -0.55
TRAF3IP1-201ENST00000373327 C14orf177Q52M58 125 aa11.6□□□□□ -0.55
TRAF3IP1-201ENST00000373327 A0A0U1RQV1 116 aa11.6□□□□□ -0.55
TRAF3IP1-201ENST00000373327 SPINK6Q6UWN8 80 aa11.59□□□□□ -0.55
TRAF3IP1-201ENST00000373327 PHF5AQ7RTV0 110 aaKnown RBP11.59□□□□□ -0.55
TRAF3IP1-201ENST00000373327 LINC00528Q8N1L1 170 aa11.58□□□□□ -0.56
TRAF3IP1-201ENST00000373327 DNAH10OSP0CZ25 163 aa11.57□□□□□ -0.56
TRAF3IP1-201ENST00000373327 PKIGQ9Y2B9 76 aa11.57□□□□□ -0.56
TRAF3IP1-201ENST00000373327 ZNF469Q96JG9 3925 aaPredicted RBP11.57□□□□□ -0.56
TRAF3IP1-201ENST00000373327 Q9BRP9 147 aa11.57□□□□□ -0.56
TRAF3IP1-201ENST00000373327 Q6ZRX8 168 aa11.57□□□□□ -0.56
TRAF3IP1-201ENST00000373327 LY6G6CO95867 125 aa11.56□□□□□ -0.56
TRAF3IP1-201ENST00000373327 MP68P56378 58 aa11.56□□□□□ -0.56
TRAF3IP1-201ENST00000373327 PRYO14603 147 aa11.55□□□□□ -0.56
TRAF3IP1-201ENST00000373327 CRYGAP11844 174 aa11.55□□□□□ -0.56
TRAF3IP1-201ENST00000373327 LOC110117498A0A087WWA1 95 aa11.55□□□□□ -0.56
TRAF3IP1-201ENST00000373327 NDUFB1O75438 58 aa11.54□□□□□ -0.56
TRAF3IP1-201ENST00000373327 SMIM29Q86T20 159 aa11.53□□□□□ -0.56
TRAF3IP1-201ENST00000373327 LINC01600Q96MT4 127 aa11.53□□□□□ -0.56
TRAF3IP1-201ENST00000373327 ERC2-IT1O76042 136 aa11.53□□□□□ -0.56
TRAF3IP1-201ENST00000373327 TRRAPQ9Y4A5 3859 aa11.52□□□□□ -0.56
TRAF3IP1-201ENST00000373327 TMEM254Q8TBM7 123 aa11.52□□□□□ -0.57
TRAF3IP1-201ENST00000373327 Q8N377 158 aa11.52□□□□□ -0.57
TRAF3IP1-201ENST00000373327 MDFIQ99750 246 aa11.51□□□□□ -0.57
TRAF3IP1-201ENST00000373327 CXCL6P80162 114 aa11.5□□□□□ -0.57
TRAF3IP1-201ENST00000373327 RPL37AP61513 92 aaKnown RBP11.49□□□□□ -0.57
TRAF3IP1-201ENST00000373327 LINC00476Q8WZB0 136 aa11.49□□□□□ -0.57
TRAF3IP1-201ENST00000373327 OBSCN-AS1Q96MR7 158 aa11.48□□□□□ -0.57
TRAF3IP1-201ENST00000373327 CYSTM1Q9H1C7 97 aa11.48□□□□□ -0.57
TRAF3IP1-201ENST00000373327 KCNQ1DNQ9H478 68 aa11.46□□□□□ -0.57
TRAF3IP1-201ENST00000373327 IGLV1-50A0A075B6I6 118 aa11.46□□□□□ -0.57
TRAF3IP1-201ENST00000373327 TENM2Q9NT68 2774 aa11.46□□□□□ -0.57
TRAF3IP1-201ENST00000373327 LINC00208Q96KT6 92 aa11.46□□□□□ -0.58
TRAF3IP1-201ENST00000373327 TRBV7-4A0A0J9YYF1 115 aa11.44□□□□□ -0.58
TRAF3IP1-201ENST00000373327 TRBV7-6A0A0J9YX20 115 aa11.44□□□□□ -0.58
TRAF3IP1-201ENST00000373327 IGKV4-1P06312 121 aa11.43□□□□□ -0.58
TRAF3IP1-201ENST00000373327 SPTSSBQ8NFR3 76 aa11.43□□□□□ -0.58
TRAF3IP1-201ENST00000373327 Q8NBF4 154 aa11.43□□□□□ -0.58
TRAF3IP1-201ENST00000373327 EPM2AB3EWF7 344 aa11.42□□□□□ -0.58
TRAF3IP1-201ENST00000373327 F8WDY8 70 aa11.41□□□□□ -0.58
TRAF3IP1-201ENST00000373327 C4orf26Q17RF5 130 aa11.4□□□□□ -0.58
TRAF3IP1-201ENST00000373327 K7EQZ3 153 aa11.39□□□□□ -0.59
TRAF3IP1-201ENST00000373327 NUPR2A6NF83 97 aa11.38□□□□□ -0.59
TRAF3IP1-201ENST00000373327 C16orf90A8MZG2 172 aa11.38□□□□□ -0.59
TRAF3IP1-201ENST00000373327 SVIPQ8NHG7 77 aa11.37□□□□□ -0.59
TRAF3IP1-201ENST00000373327 A0A1W2PNM2 257 aa11.36□□□□□ -0.59
TRAF3IP1-201ENST00000373327 CIRBP-AS1Q8TBR5 109 aa11.36□□□□□ -0.59
TRAF3IP1-201ENST00000373327 IGHV6-1A0A0B4J1U7 121 aa11.35□□□□□ -0.59
TRAF3IP1-201ENST00000373327 NBDYA0A0U1RRE5 68 aa11.35□□□□□ -0.59
TRAF3IP1-201ENST00000373327 HCG22E2RYF7 251 aa11.35□□□□□ -0.59
TRAF3IP1-201ENST00000373327 NDUFC1O43677 76 aa11.35□□□□□ -0.59
TRAF3IP1-201ENST00000373327 CASC2Q6XLA1 102 aa11.35□□□□□ -0.59
TRAF3IP1-201ENST00000373327 KRTAP26-1Q6PEX3 210 aa11.34□□□□□ -0.59
TRAF3IP1-201ENST00000373327 WIPF1O43516 503 aa11.34□□□□□ -0.59
TRAF3IP1-201ENST00000373327 PCOTHQ58A44 107 aa11.34□□□□□ -0.59
TRAF3IP1-201ENST00000373327 IGLV5-52A0A0A0MRZ9 124 aa11.33□□□□□ -0.6
TRAF3IP1-201ENST00000373327 ANAPC11Q9NYG5 84 aa11.33□□□□□ -0.6
TRAF3IP1-201ENST00000373327 SERP1Q9Y6X1 66 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms