RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 DEFB136Q30KP8 78 aa6.39□□□□□ -1.39
SF3A3-201ENST00000373019 C18orf65Q6ZTR6 163 aa6.39□□□□□ -1.39
SF3A3-201ENST00000373019 CLPSL2Q6UWE3 100 aa6.38□□□□□ -1.39
SF3A3-201ENST00000373019 PRR4Q16378 134 aa6.38□□□□□ -1.39
SF3A3-201ENST00000373019 DNAJC9-AS1A6NH13 148 aa6.37□□□□□ -1.39
SF3A3-201ENST00000373019 UBE2BP63146 152 aa6.37□□□□□ -1.39
SF3A3-201ENST00000373019 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.37□□□□□ -1.39
SF3A3-201ENST00000373019 Q6YL49 198 aa6.36□□□□□ -1.39
SF3A3-201ENST00000373019 DIRC1Q969H9 104 aa6.36□□□□□ -1.39
SF3A3-201ENST00000373019 C3orf84H3BNL1 204 aa6.36□□□□□ -1.39
SF3A3-201ENST00000373019 ODF3L2Q3SX64 289 aa6.36□□□□□ -1.39
SF3A3-201ENST00000373019 MDFIQ99750 246 aa6.36□□□□□ -1.39
SF3A3-201ENST00000373019 LCA10Q71F78 164 aa6.35□□□□□ -1.39
SF3A3-201ENST00000373019 PRB2P02812 416 aaPredicted RBP6.35□□□□□ -1.39
SF3A3-201ENST00000373019 DEFB114Q30KQ6 69 aa6.35□□□□□ -1.39
SF3A3-201ENST00000373019 LYRM9A8MSI8 78 aa6.35□□□□□ -1.39
SF3A3-201ENST00000373019 ELOF1P60002 83 aaKnown RBP6.35□□□□□ -1.39
SF3A3-201ENST00000373019 A0A1B0GUV1 79 aa6.34□□□□□ -1.39
SF3A3-201ENST00000373019 A6NN06 94 aa6.34□□□□□ -1.39
SF3A3-201ENST00000373019 CCL24O00175 119 aa6.34□□□□□ -1.39
SF3A3-201ENST00000373019 FSHBP01225 129 aa6.34□□□□□ -1.39
SF3A3-201ENST00000373019 APOC4P55056 127 aa6.34□□□□□ -1.39
SF3A3-201ENST00000373019 PHF5AQ7RTV0 110 aaKnown RBP6.34□□□□□ -1.39
SF3A3-201ENST00000373019 ST20-AS1Q8NBB2 130 aa6.34□□□□□ -1.39
SF3A3-201ENST00000373019 ZNF73O43830 326 aaPredicted RBP6.34□□□□□ -1.4
SF3A3-201ENST00000373019 UNQ6190/PRO20217Q6UXQ8 127 aa6.33□□□□□ -1.4
SF3A3-201ENST00000373019 Q8N9P0 234 aaPredicted RBP6.33□□□□□ -1.4
SF3A3-201ENST00000373019 GIG44P09565 113 aaPredicted RBP6.33□□□□□ -1.4
SF3A3-201ENST00000373019 HIGD2BQ4VC39 106 aa6.33□□□□□ -1.4
SF3A3-201ENST00000373019 TENM1Q9UKZ4 2725 aa6.33□□□□□ -1.4
SF3A3-201ENST00000373019 HCG22E2RYF7 251 aa6.32□□□□□ -1.4
SF3A3-201ENST00000373019 CHKB-CPT1BH3BT56 60 aa6.32□□□□□ -1.4
SF3A3-201ENST00000373019 UBE2AP49459 152 aa6.32□□□□□ -1.4
SF3A3-201ENST00000373019 SPTSSBQ8NFR3 76 aa6.32□□□□□ -1.4
SF3A3-201ENST00000373019 ATP11AUNQ6ZP68 121 aa6.31□□□□□ -1.4
SF3A3-201ENST00000373019 IGLV10-54A0A075B6I4 117 aa6.31□□□□□ -1.4
SF3A3-201ENST00000373019 KRTAP24-1Q3LI83 254 aa6.31□□□□□ -1.4
SF3A3-201ENST00000373019 FBN1P35555 2871 aaKnown RBP6.31□□□□□ -1.4
SF3A3-201ENST00000373019 ETDCA0A1B0GVM5 59 aa6.31□□□□□ -1.4
SF3A3-201ENST00000373019 CHCHD10Q8WYQ3 142 aaPredicted RBP6.3□□□□□ -1.4
SF3A3-201ENST00000373019 A0A0J9YWU9 116 aa6.29□□□□□ -1.4
SF3A3-201ENST00000373019 NDUFS5O43920 106 aa6.29□□□□□ -1.4
SF3A3-201ENST00000373019 CSNK1G2-AS1Q8NCQ2 148 aa6.29□□□□□ -1.4
SF3A3-201ENST00000373019 C16orf74Q96GX8 76 aa6.29□□□□□ -1.4
SF3A3-201ENST00000373019 LINC00528Q8N1L1 170 aa6.28□□□□□ -1.4
SF3A3-201ENST00000373019 DSCR10P59022 87 aa6.28□□□□□ -1.4
SF3A3-201ENST00000373019 XAGE1AQ9HD64 81 aa6.28□□□□□ -1.4
SF3A3-201ENST00000373019 OXLD1Q5BKU9 147 aa6.28□□□□□ -1.4
SF3A3-201ENST00000373019 ZNF702PQ9H963 129 aa6.28□□□□□ -1.4
SF3A3-201ENST00000373019 B9D2Q9BPU9 175 aa6.27□□□□□ -1.41
SF3A3-201ENST00000373019 LIMD2Q9BT23 127 aa6.27□□□□□ -1.41
SF3A3-201ENST00000373019 PRR15LQ9BU68 103 aa6.27□□□□□ -1.41
SF3A3-201ENST00000373019 NBEAL2Q6ZNJ1 2754 aa6.26□□□□□ -1.41
SF3A3-201ENST00000373019 K7EQZ3 153 aa6.26□□□□□ -1.41
SF3A3-201ENST00000373019 IGLV5-48A0A075B6I7 105 aa6.26□□□□□ -1.41
SF3A3-201ENST00000373019 A0A096LPF7 62 aa6.26□□□□□ -1.41
SF3A3-201ENST00000373019 Q75L30 129 aa6.26□□□□□ -1.41
SF3A3-201ENST00000373019 A0A1W2PNM2 257 aa6.25□□□□□ -1.41
SF3A3-201ENST00000373019 C8orf87E5RJ46 101 aa6.25□□□□□ -1.41
SF3A3-201ENST00000373019 GYPEP15421 78 aa6.25□□□□□ -1.41
SF3A3-201ENST00000373019 REG3AQ06141 175 aa6.25□□□□□ -1.41
SF3A3-201ENST00000373019 KPRPQ5T749 579 aaPredicted RBP6.25□□□□□ -1.41
SF3A3-201ENST00000373019 SPAG11BQ08648 103 aa6.24□□□□□ -1.41
SF3A3-201ENST00000373019 NDUFB1O75438 58 aa6.24□□□□□ -1.41
SF3A3-201ENST00000373019 Q8N377 158 aa6.24□□□□□ -1.41
SF3A3-201ENST00000373019 C7orf65Q6ZTY9 151 aa6.23□□□□□ -1.41
SF3A3-201ENST00000373019 C6orf48Q9UBA6 75 aa6.23□□□□□ -1.41
SF3A3-201ENST00000373019 LOC101927531A0A1B0GV80 90 aa6.23□□□□□ -1.41
SF3A3-201ENST00000373019 VPREB1P12018 145 aa6.23□□□□□ -1.41
SF3A3-201ENST00000373019 LINC00208Q96KT6 92 aa6.23□□□□□ -1.41
SF3A3-201ENST00000373019 WFDC10AQ9H1F0 79 aa6.23□□□□□ -1.41
SF3A3-201ENST00000373019 ANGP03950 147 aaKnown RBP6.22□□□□□ -1.41
SF3A3-201ENST00000373019 KCNQ1DNQ9H478 68 aa6.22□□□□□ -1.41
SF3A3-201ENST00000373019 GVQW2A0A096LPI5 108 aaPredicted RBP6.22□□□□□ -1.41
SF3A3-201ENST00000373019 A6NED7 52 aa6.22□□□□□ -1.41
SF3A3-201ENST00000373019 C4orf3Q8WVX3 66 aa6.22□□□□□ -1.41
SF3A3-201ENST00000373019 Q9BRP9 147 aa6.21□□□□□ -1.41
SF3A3-201ENST00000373019 CDC42SE1Q9NRR8 79 aa6.21□□□□□ -1.41
SF3A3-201ENST00000373019 DEFB130BP0DP73 79 aa6.21□□□□□ -1.42
SF3A3-201ENST00000373019 DEFB130AP0DP74 79 aa6.21□□□□□ -1.42
SF3A3-201ENST00000373019 MOBPQ13875 183 aa6.21□□□□□ -1.42
SF3A3-201ENST00000373019 DEFB105AQ8NG35 78 aa6.2□□□□□ -1.42
SF3A3-201ENST00000373019 A0A1B0GW54 56 aa6.2□□□□□ -1.42
SF3A3-201ENST00000373019 SPANXA2-OT1Q8N9U9 137 aa6.2□□□□□ -1.42
SF3A3-201ENST00000373019 KRTAP21-3Q3LHN1 58 aa6.2□□□□□ -1.42
SF3A3-201ENST00000373019 VWFP04275 2813 aa6.19□□□□□ -1.42
SF3A3-201ENST00000373019 DEFB116Q30KQ4 102 aa6.19□□□□□ -1.42
SF3A3-201ENST00000373019 TNP2Q05952 138 aa6.19□□□□□ -1.42
SF3A3-201ENST00000373019 SPRR4Q96PI1 79 aa6.18□□□□□ -1.42
SF3A3-201ENST00000373019 TGP01266 2768 aa6.18□□□□□ -1.42
SF3A3-201ENST00000373019 PKD1L1Q8TDX9 2849 aa6.18□□□□□ -1.42
SF3A3-201ENST00000373019 Q8NBF4 154 aa6.17□□□□□ -1.42
SF3A3-201ENST00000373019 ANK3Q12955 4377 aaKnown RBP6.17□□□□□ -1.42
SF3A3-201ENST00000373019 C19orf73Q9NVV2 129 aa6.17□□□□□ -1.42
SF3A3-201ENST00000373019 C1orf137Q5JT78 98 aa6.16□□□□□ -1.42
SF3A3-201ENST00000373019 MP68P56378 58 aa6.16□□□□□ -1.42
SF3A3-201ENST00000373019 PRR26Q8N8Z3 221 aa6.15□□□□□ -1.42
SF3A3-201ENST00000373019 PRO0255Q9UI72 69 aa6.15□□□□□ -1.42
SF3A3-201ENST00000373019 C9orf163Q8N9P6 203 aa6.14□□□□□ -1.43
SF3A3-201ENST00000373019 PLAC8Q9NZF1 115 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms